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2019-07-10gnu: python-gnupg: Update to 0.4.4 [fixes CVE-2019-6690].Efraim Flashner
* gnu/packages/gnupg.scm (python-gnupg): Update to 0.4.4.
2019-07-10gnu: gpgme: Add updater properties.Efraim Flashner
* gnu/packages/gnupg.scm (gpgme)[properties]: New field. Add ftp-server, ftp-directory.
2019-07-10gnu: npth: Add updater properties.Efraim Flashner
* gnu/packages/gnupg.scm (npth)[properties]: New field. Add ftp-server, ftp-directory.
2019-07-10gnu: gpa: Update to 0.10.0.Efraim Flashner
* gnu/packages/gnupg.scm (gpa): Update to 0.10.0.
2019-07-10gnu: gpa: Add updater properties.Efraim Flashner
* gnu/packages/gnupg.scm (gpa)[properties]: New field, add ftp-server, ftp-directory.
2019-07-10gnu: postgresql@9: Update to 9.6.14 [fixes CVE-2018-1058, CVE-2019-9193]Efraim Flashner
* gnu/packages/databases.scm (postgresql@9): Update to 9.6.14.
2019-07-10gnu: gnupg: Update to 2.2.17.Efraim Flashner
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.17.
2019-07-09gnu: icecat: Update to 60.8.0-guix1 [security fixes].Mark H Weaver
Includes fixes for CVE-2019-9811, CVE-2019-11709, CVE-2019-11711, CVE-2019-11712, CVE-2019-11713, CVE-2019-11715, CVE-2019-11717, CVE-2019-11719, CVE-2019-11729, and CVE-2019-11730. * gnu/packages/gnuzilla.scm (%icecat-version): Update to 60.8.0-guix1. (icecat-source)[upstream-firefox-source]: Update hash. (icecat): Refresh some stale comments.
2019-07-10Merge branch 'master' into stagingMarius Bakke
2019-07-10gnu: ungoogled-chromium: Increase build timeout.Marius Bakke
* gnu/packages/chromium.scm (ungoogled-chromium)[properties]: Set TIMEOUT to 40 hours.
2019-07-09gnu: iproute2: Update to 5.2.0.Tobias Geerinckx-Rice
* gnu/packages/linux.scm (iproute): Update to 5.2.0.
2019-07-09gnu: python-internetarchive: Update to 1.8.5.Oleg Pykhalov
* gnu/packages/web.scm (python-internetarchive)[version]: Update to 1.8.5. [source](modules, snippet): New fields.
2019-07-09gnu: wgetpaste: Update to 2.29.Efraim Flashner
* gnu/packages/wget.scm (wgetpaste): Update to 2.29. [arguments]: Replace default paste service. Install license file.
2019-07-09gnu: emacs-stumpwm-mode: Update to 0.0.1-1.8fbe071.Oleg Pykhalov
* gnu/packages/emacs-xyz.scm (emacs-stumpwm-mode): Update to 0.0.1-1.8fbe071.
2019-07-09gnu: r-biocinstaller: Remove entirely.Tobias Geerinckx-Rice
This follows up on commit 0971f8bd884b6e92b77d9e12030cd58279699183, which led to ‘r-biocmanager: unbound variable’ errors. See <https://lists.gnu.org/archive/html/guix-devel/2019-07/msg00120.html>. * gnu/packages/bioinformatics.scm (r-biocinstaller): Remove variable.
2019-07-09gnu: Add anonip.Hartmut Goebel
* gnu/packages/web.scm (anonip): New variable.
2019-07-09gnu: snap: Update to 5.0.1.Nicolas Goaziou
* gnu/packages/education.scm (snap): Update to 5.0.1.
2019-07-09gnu: musescore: Update to 3.2.3.Nicolas Goaziou
* gnu/packages/music.scm (musescore): Update to 3.2.3.
2019-07-09gnu: libmicrohttpd: Update to 0.9.65.Tobias Geerinckx-Rice
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.65.
2019-07-09gnu: grub: Build ‘grub-mount’.Tobias Geerinckx-Rice
This increases the closure size by a mere 1.8 MiB (0.8%). * gnu/packages/bootloaders.scm (grub)[inputs]: Add fuse.
2019-07-09gnu: grub: Update to 2.04.Tobias Geerinckx-Rice
* gnu/packages/bootloaders.scm (grub): Update to 2.04. [source]: Remove upstreamed patches. [arguments]: Don't require Python. Add a ‘disable-pixel-perfect-test’ phase to skip tests that fail with with our newer Unifont. * gnu/packages/patches/grub-efi-fat-serial-number.patch: Adjust context. * gnu/packages/patches/grub-binutils-compat.patch, gnu/packages/patches/grub-check-error-efibootmgr.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2019-07-08gnu: Remove r-biocinstaller.Tobias Geerinckx-Rice
It requires R < 3.6 and is no longer supported. * gnu/packages/bioinformatics.scm (r-biocinstaller): Define as deprecated in favour of r-biocmanager.
2019-07-08gnu: r-xbioc: Update to 0.1.16-1.6ff0670.Tobias Geerinckx-Rice
This is needed to deprecate r-biocinstaller, which is no longer distributed. * gnu/packages/bioinformatics.scm (r-xbioc): Update to 0.1.16-1.6ff0670. [propagated-inputs]: Replace deprecated r-biocinstaller with r-biocmanager.
2019-07-08gnu: cmh: Fix build.Tobias Geerinckx-Rice
This follows up on commit 1de48e8f8afec23847458c533d2fae0d69d8942a. * gnu/packages/algebra.scm (fplll-4-cmh): New variable. (cmh)[inputs]: Use it.
2019-07-08gnu: libomp: Download over HTTPS.Tobias Geerinckx-Rice
* gnu/packages/llvm.scm (libomp)[source]: Use HTTPS.
2019-07-08gnu: libomp: Fix source hash.Tobias Geerinckx-Rice
This is a follow-up to commit c5296e205b65a9b53553cf45be2ab223d5e82df5, which updated llvm. * gnu/packages/llvm.scm (libomp)[source]: Fix hash.
2019-07-08gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.4.7.Tobias Geerinckx-Rice
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): Update to 3.4.7.
2019-07-08gnu: Add emacs-polymode-org.Joseph LaFreniere
* gnu/packages/emacs-xyz.scm (emacs-polymode-org): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-08gnu: emacs-polymode: Update to 0.2.Joseph LaFreniere
* gnu/packages/emacs-xyz.scm (emacs-polymode): Update to 0.2. [source]: Change URL of Git repository to Polymode GitHub project. [homepage]: Change URL to polymode GitHub project. [description]: Realign text. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-08gnu: i3blocks: Update to ec050e7.ison
* gnu/packages/wm.scm (i3blocks): Update to ec050e7. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-08gnu: dosfstools: Enable compat symlinks.Pierre Langlois
Enable compatibility symlinks to provide commands such as `mkfs.vfat`. * gnu/packages/disk.scm (dosfstools)[arguments]: Pass "--enable-compat-symlinks" to configure. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-08gnu: wireservice: New wireservice-package macro.Pierre Langlois
Replace the parent 'base-package' variable with a 'wireservice-package' macro that includes all common package fields. * gnu/packages/wireservice.scm (base-package): Delete. (wireservice-package): New macro. (python-leather, python-agate, python-agate-sql, python-agate-dbf, python-agate-excel): Use wireservice-package. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-08gnu: gama: Update to 2.06.Efraim Flashner
* gnu/packages/gps.scm (gama): Update to 2.06.
2019-07-07gnu: diffoscope: Update to 116.Vagrant Cascadian
* gnu/packages/package-management (diffoscope): Update to 116.
2019-07-07gnu: Add csvkit.Pierre Langlois
* gnu/packages/wireservice.scm (csvkit): New variable. * gnu/packages/patches/csvkit-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-agate-excel.Pierre Langlois
* gnu/packages/wireservice.scm (python-agate-excel): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-agate-dbf.Pierre Langlois
* gnu/packages/wireservice.scm (python-agate-dbf): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-agate-sql.Pierre Langlois
* gnu/packages/wireservice.scm (python-agate-sql): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-agate.Pierre Langlois
* gnu/packages/wireservice.scm (python-agate): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-leather.Pierre Langlois
* gnu/packages/wireservice.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-dbfread.Pierre Langlois
* gnu/packages/python-xyz.scm (python-dbfread): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-crate.Pierre Langlois
* gnu/packages/databases.scm (python-crate): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-pytimeparse.Pierre Langlois
* gnu/packages/time.scm (python-pytimeparse): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add python-slugify.Pierre Langlois
* gnu/packages/python-web.scm (python-slugify): New variable. * gnu/packages/patches/python-slugify-depend-on-unidecode.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add emacs-moe-theme-el.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-moe-theme-el): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: emacs-goto-chg: Update to 1.7.3-1.1829a13.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-goto-chg): Update to 1.7.3-1.1829a13. [origin]: Use GIT-FETCH and GIT-REFERENCE. [home-page]: Update. [inputs]: Add emacs-undo-tree. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: emacs-hydra: Update to 0.15.0.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-hydra): Update to 0.15.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: Add emacs-lpy.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-lpy): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: emacs-md4rd: Update to 0.3.1.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-md4rd): Update to 0.3.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-07gnu: emacs-zoutline: Update to 0.2.0.Brian Leung
* gnu/packages/emacs-xyz.scm (emacs-zoutline): Update to 0.2.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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