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2020-12-09gnu: r-biocparallel: Update to 1.24.1.Roel Janssen
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.24.1.
2020-12-09gnu: r-biomart: Update to 2.46.0.zimoun
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.46.0.
2020-12-09gnu: r-annotationdbi: Update to 1.52.0.zimoun
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.52.0.
2020-12-09gnu: r-biobase: Update to 2.50.0.zimoun
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.50.0.
2020-12-09gnu: r-genomicranges: Update to 1.42.0.zimoun
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.42.0.
2020-12-09gnu: r-limma: Update to 3.46.0.zimoun
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.46.0.
2020-12-09gnu: r-edger: Update to 3.32.0.zimoun
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.32.0.
2020-12-09gnu: r-genomeinfodb: Update to 1.26.0.zimoun
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.26.0.
2020-12-09gnu: r-bioccheck: Update to 1.26.0.zimoun
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.26.0.
2020-12-09gnu: r-biocstyle: Update to 2.18.0.zimoun
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.18.0.
2020-12-09gnu: r-biocviews: Update to 1.58.0.zimoun
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.58.0.
2020-12-09gnu: r-grohmm: Update to 1.24.0.zimoun
* gnu/packages/bioinformatics.scm (r-grohmm): Update to 1.24.0.
2020-12-09gnu: r-systempiper: Update to 1.24.2.Roel Janssen
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.24.2. [propagated-inputs]: Add r-iranges.
2020-12-09gnu: r-shortread: Update to 1.48.0.zimoun
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.48.0.
2020-12-09gnu: r-gostats: Update to 2.56.0.zimoun
* gnu/packages/bioinformatics.scm (r-gostats): Update to 2.56.0.
2020-12-09gnu: r-category: Update to 2.56.0.zimoun
* gnu/packages/bioinformatics.scm (r-category): Update to 2.56.0.
2020-12-09gnu: r-gseabase: Update to 1.52.0.zimoun
* gnu/packages/bioinformatics.scm (r-gseabase): Update to 1.52.0.
2020-12-09gnu: r-rbgl: Update to 1.66.0.zimoun
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.66.0.
2020-12-09gnu: r-annotationforge: Update to 1.32.0.zimoun
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.32.0.
2020-12-09gnu: r-dexseq: Update to 1.36.0.zimoun
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.36.0.
2020-12-09gnu: r-deseq2: Update to 1.30.0.zimoun
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.30.0.
2020-12-09gnu: r-genefilter: Update to 1.72.0.zimoun
* gnu/packages/bioinformatics.scm (r-genefilter): Update to 1.72.0.
2020-12-09gnu: r-beachmat: Update to 2.6.1.Roel Janssen
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.6.1.
2020-12-09gnu: r-ncdfflow: Fix r-rhdf5libs link.zimoun
* gnu/packages/bioconductor.scm (r-ncdfflow): [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09gnu: r-cytoml: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-cytoml): [arguments]: Avoid to have a plain directory on the list of libraries to link.
2020-12-09gnu: r-flowworkspace: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-flowworkspace): [arguments]: Avoid to have a plain directory on the list of libraries to link.
2020-12-09gnu: r-hdf5array: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-hdf5array): [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09gnu: r-cytolib: Fix r-rhdf5libs linking.zimoun
* gnu/packages/bioconductor.scm (r-cytolib): [arguments]: Avoid to have a plain directory on the list of libraries to link. Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
2020-12-09gnu: r-rhdf5lib: Fix build.Roel Janssen
* gnu/packages/bioconductor.scm (r-rhdf5lib)[arguments]: Fix build.
2020-12-09gnu: r-rhdf5lib: Update to 1.12.0.zimoun
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.12.0.
2020-12-09gnu: r-hdf5array: Update to 1.18.0.zimoun
* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.18.0.
2020-12-09gnu: r-delayedarray: Update to 0.16.0.zimoun
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.16.0. [propagated-inputs]: Add r-matrixgenerics; remove r-matrixstats.
2020-12-09gnu: Add r-matrixgenerics.Roel Janssen
* gnu/packages/bioconductor.scm (r-matrixgenerics): New variable.
2020-12-09gnu: Add r-ggalluvial.Roel Janssen
* gnu/packages/cran.scm (r-ggalluvial): New variable.
2020-12-09gnu: r-iranges: Update to 2.24.0.zimoun
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.24.0.
2020-12-09gnu: r-s4vectors: Update to 0.28.0.zimoun
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.28.0.
2020-12-09gnu: r-hitc: Update to 1.34.0.zimoun
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.34.0.
2020-12-09gnu: r-fithic: Update to 1.16.0.zimoun
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.16.0.
2020-12-09gnu: r-xvector: Update to 0.30.0.zimoun
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.30.0.
2020-12-09gnu: r-rgraphviz: Update to 2.34.0.zimoun
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.34.0.
2020-12-09gnu: r-preprocesscore: Update to 1.52.0.zimoun
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.52.0.
2020-12-09gnu: r-fourcseq: Update to 1.24.0.zimoun
* gnu/packages/bioconductor.scm (r-fourcseq): Update to 1.24.0.
2020-12-09gnu: r-icens: Update to 1.62.0.zimoun
* gnu/packages/bioconductor.scm (r-icens): Update to 1.62.0.
2020-12-09gnu: r-m3c: Update to 1.12.0.zimoun
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.12.0.
2020-12-09gnu: r-rgreat: Update to 1.22.0.zimoun
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.22.0.
2020-12-09gnu: r-biodist: Update to 1.62.0.zimoun
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.62.0.
2020-12-09gnu: r-biocworkflowtools: Update to 1.16.0.zimoun
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.16.0.
2020-12-09gnu: r-biocset: Update to 1.4.0.zimoun
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.4.0. [propagated-inputs]: Add r-s4vectors; remove r-rtracklayer.
2020-12-09gnu: Add r-biocio.zimoun
* gnu/packages/bioconductor.scm (r-biocio): New variable.
2020-12-09gnu: r-biocpkgtools: Update to 1.8.0.zimoun
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.8.0.
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