| Age | Commit message (Expand) | Author |
|---|
| 2022-05-30 | gnu: r-gee: Update to 4.13-23....* gnu/packages/cran.scm (r-gee): Update to 4.13-23.
| Ricardo Wurmus |
| 2022-05-30 | gnu: r-qpdf: Update to 1.2.0....* gnu/packages/cran.scm (r-qpdf): Update to 1.2.0.
[source]: Remove trailing #T from snippet.
[arguments]: Remove trailing #T from 'configure phase.
[inputs]: Add libjpeg-turbo.
| Ricardo Wurmus |
| 2022-05-30 | gnu: r-batchelor: Update to 1.12.1....* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.12.1.
| Ricardo Wurmus |
| 2022-05-30 | gnu: gcc-9: Update to 9.5.0....* gnu/packages/gcc.scm (gcc-9): Update to 9.5.0.
| Efraim Flashner |
| 2022-05-30 | gnu: hello: Update to 2.12.1....* gnu/packages/base.scm (hello): Update to 2.12.1.
| Efraim Flashner |
| 2022-05-30 | gnu: nss: Skip tests on riscv64-linux....* gnu/packages/nss.scm (nss)[arguments]: Skip tests when building for
riscv64-linux.
| Efraim Flashner |
| 2022-05-30 | gnu: nss: Adjust make-flags for riscv64-linux....* gnu/packages/nss.scm (nss)[arguments]: When building for riscv64-linux
don't build the binaries with gtest.
| Efraim Flashner |
| 2022-05-30 | gnu: Add rust-serde-regex-1....* gnu/packages/crates-io.scm (rust-serde-regex-1): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Evgenii Lepikhin |
| 2022-05-30 | gnu: rust-nom-7: Update to 7.1.1....* gnu/packages/crates-io.scm (rust-nom-7): Update to 7.1.1.
[arguments]: In cargo-inputs replace rust-minimal-lexical-0.1 with 0.2.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Evgenii Lepikhin |
| 2022-05-30 | gnu: Add rust-minimal-lexical-0.2....* gnu/packages/crates-io.scm (rust-minimal-lexical-0.2): New variable.
(rust-minimal-lexical-0.1): Inherit from rust-minimal-lexical-0.2.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Evgenii Lepikhin |
| 2022-05-30 | gnu: Add rust-located-yaml-0.2....* gnu/packages/crates-io.scm (rust-located-yaml-0.2) New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Evgenii Lepikhin |
| 2022-05-30 | gnu: Add rust-pretty-0.11....* gnu/packages/crates-io.scm (rust-pretty-0.11) New variable.
(rust-pretty-0.5): Inherit from rust-pretty-0.11.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Evgenii Lepikhin |
| 2022-05-30 | gnu: Add rust-nom-locate-4....* gnu/packages/crates-io.scm (rust-nom-locate-4): New variable.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Evgenii Lepikhin |
| 2022-05-30 | gnu: virtuoso-ose: Register patch....This is a follow-up to 48efbde7a944acfe4fc944bf27bfa9ff82592024.
* gnu/local.mk (dist_patch_DATA): Register patch.
| Efraim Flashner |
| 2022-05-30 | gnu: yt-dlp: Remove trailing #t....* gnu/packages/video.scm (yt-dlp)[source]: Remove trailing #t from
snippet.
[arguments]: Remove trailing #t from phases.
| Efraim Flashner |
| 2022-05-30 | gnu: yt-dlp: Update to 2022.05.18....* gnu/packages/video.scm (yt-dlp): Update to 2022.05.18.
[inputs]: Add python-brotli and python-certifi.
| Efraim Flashner |
| 2022-05-30 | gnu: links: Update to 2.27....* gnu/packages/web-browsers.scm (links): Update to 2.27.
| Efraim Flashner |
| 2022-05-30 | gnu: virtuoso-ose: Update to 7.2.7....* gnu/packages/databases.scm (virtuoso-ose): Update to 7.2.7; Run autogen
after applying the patch below.
* gnu/packages/patches/virtuoso-ose-remove-pre-built-jar-files.patch:
New file.
| Roel Janssen |
| 2022-05-29 | gnu: icecat: Update to 91.9.1-guix0-preview1 [security fixes]....Includes fixes for CVE-2022-1529 and CVE-2022-1802.
* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
| Mark H Weaver |
| 2022-05-29 | gnu: Add python-gpy....* gnu/packages/python-science.scm (python-gpy): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Wiktor Zelazny |
| 2022-05-29 | gnu: Add python-paramz....* gnu/packages/python-science.scm (python-paramz): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Wiktor Zelazny |
| 2022-05-29 | gnu: Add python-climin....* gnu/packages/python-science.scm (python-climin): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Wiktor Zelazny |
| 2022-05-29 | gnu: wla-dx: Update to 10.1....* gnu/packages/assembly.scm (wla-dx): Update to 10.1.
[native-inputs]: Use new style.
[arguments]: Add custom 'check phase to run run_tests.sh.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Felix Gruber |
| 2022-05-29 | gnu: openjdk: Update to 17.0.3....* gnu/packages/java.scm (openjdk17): Update to 17.0.3.
| Danny Milosavljevic |
| 2022-05-29 | gnu: python-translate-toolkit: Update to 3.6.2....* gnu/packages/python-xyz.scm (python-translate-toolkit): Update to
3.6.2.
| Julien Lepiller |
| 2022-05-29 | gnu: python-user-agents: Update to 2.2.0....* gnu/packages/python-xyz.scm (python-user-agents): Update to 2.2.0.
| Julien Lepiller |
| 2022-05-29 | gnu: python-ua-parser: Update to 0.10.0....* gnu/packages/python-xyz.scm (python-ua-parser): Update to 0.10.0.
| Julien Lepiller |
| 2022-05-29 | gnu: lagrange: Update to 1.13.6....* gnu/packages/web-browsers.scm (lagrange): Update to 1.13.6.
[source]: Adjust snippet to remove another bundled library.
| Efraim Flashner |
| 2022-05-29 | gnu: wget: Update to 1.21.3....* gnu/packages/wget.scm (wget): Update to 1.21.3.
| Efraim Flashner |
| 2022-05-29 | gnu: mutt: Update to 2.2.5....* gnu/packages/mail.scm (mutt): Update to 2.2.5.
| Efraim Flashner |
| 2022-05-29 | gnu: git-annex: Update to 10.20220525....* gnu/packages/haskell-apps.scm (git-annex): Update to 10.20220525.
| Efraim Flashner |
| 2022-05-29 | gnu: nmap: Honor tests? flag....* gnu/packages/admin.scm (nmap)[arguments]: In custom 'check phase honor
the #:tests? flag.
| Efraim Flashner |
| 2022-05-29 | gnu: wgetpaste: Remove trailing #t from phases....* gnu/packages/wget.scm (wgetpaste)[arguments]: Remove trailing #t from
phases.
| Efraim Flashner |
| 2022-05-29 | gnu: wgetpaste: Add missing input....* gnu/packages/wget.scm (wgetpaste)[inputs]: Add bash-minimal.
| Efraim Flashner |
| 2022-05-29 | gnu: telescope: Update to 0.8.1....* gnu/packages/web-browsers.scm (telescope): Update to 0.8.1.
[home-page]: Update to new upstream home-page.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| cage |
| 2022-05-29 | gnu: Add pbuilder....* gnu/packages/debian.scm (pbuilder): New variable.
| Efraim Flashner |
| 2022-05-29 | gnu: apostrophe: Build with correct webkitgtk....* gnu/packages/gnome.scm (apostrophe)[inputs]: Replace webkitgtk with
webkitgtk-with-libsoup2.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
| Rene Saavedra |
| 2022-05-29 | Merge branch 'wip-r' | Ricardo Wurmus |
| 2022-05-29 | gnu: r-bsgenome-hsapiens-ucsc-hg19-masked: Update to 1.3.993....* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19-masked): Update to 1.3.993.
| Ricardo Wurmus |
| 2022-05-29 | gnu: clang-from-llvm: Fix building on riscv64-linux....* gnu/packages/llvm.scm (clang-from-llvm)[arguments]: When building for
riscv64-linux add configure-flags and make-flags to ensure linking with
'-latomic'.
| Efraim Flashner |
| 2022-05-29 | gnu: Add r-scmap....* gnu/packages/bioconductor.scm (r-scmap): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-05-29 | gnu: pigx-sars-cov-2: Fix build....* gnu/packages/bioinformatics.scm (pigx-sars-cov-2)[arguments]: Add
'autoreconf phase to patch build system.
| Ricardo Wurmus |
| 2022-05-29 | gnu: pigx-bsseq: Fix build....* gnu/packages/bioinformatics.scm (pigx-bsseq)[arguments]: Patch build system
in 'autoreconf phase.
| Ricardo Wurmus |
| 2022-05-29 | gnu: pigx-scrnaseq: Fix build....* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[arguments]: Add autoreconf
step to work around m4 macro bug and missing VERSION file.
[native-inputs]: Add autoconf and automake.
| Ricardo Wurmus |
| 2022-05-29 | gnu: pigx-chipseq: Fix build....* gnu/packages/bioinformatics.scm (pigx-chipseq)[arguments]: Patch build
system.
| Ricardo Wurmus |
| 2022-05-29 | gnu: Add r-googlevis....* gnu/packages/cran.scm (r-googlevis): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2022-05-28 | services: elogind: When started by dbus-daemon, wait for the Shepherd service....Fixes <https://issues.guix.gnu.org/55444>.
Previously shepherd and dbus-daemon would race to start elogind. In
some cases (for instance if one logs in quickly enough on the tty),
dbus-daemon would "win" and start elogind before shepherd has had a
chance to do it. Consequently, shepherd would fail to start elogind and
mark it as stopped and disabled, in turn preventing services that depend
on it such as 'xorg-server' from starting.
* gnu/services/desktop.scm (elogind-dbus-service): Rewrite to refer to a
wrapper that waits for the 'elogind' Shepherd service.
| Ludovic Courtès |
| 2022-05-28 | services: herd: Add 'wait-for-service'....* gnu/services/herd.scm (wait-for-service): New procedure.
| Ludovic Courtès |
| 2022-05-28 | gnu: Add r-msdata....* gnu/packages/bioconductor.scm (r-msdata): New variable.
| Ricardo Wurmus |
| 2022-05-28 | gnu: r-tcgabiolinksgui-data: Update to 1.16.0....* gnu/packages/bioconductor.scm (r-tcgabiolinksgui-data): Update to 1.16.0.
| Ricardo Wurmus |
