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2019-07-09gnu: emacs-stumpwm-mode: Update to 0.0.1-1.8fbe071....* gnu/packages/emacs-xyz.scm (emacs-stumpwm-mode): Update to 0.0.1-1.8fbe071. Oleg Pykhalov
2019-07-09gnu: r-biocinstaller: Remove entirely....This follows up on commit 0971f8bd884b6e92b77d9e12030cd58279699183, which led to ‘r-biocmanager: unbound variable’ errors. See <https://lists.gnu.org/archive/html/guix-devel/2019-07/msg00120.html>. * gnu/packages/bioinformatics.scm (r-biocinstaller): Remove variable. Tobias Geerinckx-Rice
2019-07-09gnu: Add anonip....* gnu/packages/web.scm (anonip): New variable. Hartmut Goebel
2019-07-09gnu: snap: Update to 5.0.1....* gnu/packages/education.scm (snap): Update to 5.0.1. Nicolas Goaziou
2019-07-09gnu: musescore: Update to 3.2.3....* gnu/packages/music.scm (musescore): Update to 3.2.3. Nicolas Goaziou
2019-07-09gnu: libmicrohttpd: Update to 0.9.65....* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.65. Tobias Geerinckx-Rice
2019-07-08gnu: glibc: Add 2.27 supported locales patch....The 'glibc-supported-locales.patch' was updated for glibc 2.29, breaking compatibility with 2.27. Add a 2.27-specific supported locales patch. * gnu/packages/patches/glibc-2.27-supported-locales.patch: New file. * gnu/packages/base.scm (glibc-2.27)[source](patches): Use 'glibc-2.27-supported-locales.patch' instead. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Carl Dong
2019-07-09gnu: grub: Build ‘grub-mount’....This increases the closure size by a mere 1.8 MiB (0.8%). * gnu/packages/bootloaders.scm (grub)[inputs]: Add fuse. Tobias Geerinckx-Rice
2019-07-09gnu: grub: Update to 2.04....* gnu/packages/bootloaders.scm (grub): Update to 2.04. [source]: Remove upstreamed patches. [arguments]: Don't require Python. Add a ‘disable-pixel-perfect-test’ phase to skip tests that fail with with our newer Unifont. * gnu/packages/patches/grub-efi-fat-serial-number.patch: Adjust context. * gnu/packages/patches/grub-binutils-compat.patch, gnu/packages/patches/grub-check-error-efibootmgr.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. Tobias Geerinckx-Rice
2019-07-08gnu: Update to 0.18.0....* gnu/packages/finance.scm (bitcoin-core): Update to 0.18.0. [inputs]: Use bdb-4.8 for compatibility. [arguments]: Remove --with-incompatible-bdb from configure flags and add check-functional phase for functional tests. Carl Dong
2019-07-08gnu: bdb: Add 4.8.30....* gnu/packages/dbm.scm (bdb-4.8): New variable. [arguments]: Configure and build from 'build_unix' directory as mentioned in documentation. (bdb-5.3): Inherit from bdb-4.8. (bdb-6): Inherit from bdb-4.8. (bdb): Point to bdb-6. Carl Dong
2019-07-08gnu: Remove r-biocinstaller....It requires R < 3.6 and is no longer supported. * gnu/packages/bioinformatics.scm (r-biocinstaller): Define as deprecated in favour of r-biocmanager. Tobias Geerinckx-Rice
2019-07-08gnu: r-xbioc: Update to 0.1.16-1.6ff0670....This is needed to deprecate r-biocinstaller, which is no longer distributed. * gnu/packages/bioinformatics.scm (r-xbioc): Update to 0.1.16-1.6ff0670. [propagated-inputs]: Replace deprecated r-biocinstaller with r-biocmanager. Tobias Geerinckx-Rice
2019-07-08gnu: cmh: Fix build....This follows up on commit 1de48e8f8afec23847458c533d2fae0d69d8942a. * gnu/packages/algebra.scm (fplll-4-cmh): New variable. (cmh)[inputs]: Use it. Tobias Geerinckx-Rice
2019-07-08gnu: libomp: Download over HTTPS....* gnu/packages/llvm.scm (libomp)[source]: Use HTTPS. Tobias Geerinckx-Rice
2019-07-08gnu: libomp: Fix source hash....This is a follow-up to commit c5296e205b65a9b53553cf45be2ab223d5e82df5, which updated llvm. * gnu/packages/llvm.scm (libomp)[source]: Fix hash. Tobias Geerinckx-Rice
2019-07-08gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.4.7....* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): Update to 3.4.7. Tobias Geerinckx-Rice
2019-07-08gnu: Add emacs-polymode-org....* gnu/packages/emacs-xyz.scm (emacs-polymode-org): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Joseph LaFreniere
2019-07-08gnu: emacs-polymode: Update to 0.2....* gnu/packages/emacs-xyz.scm (emacs-polymode): Update to 0.2. [source]: Change URL of Git repository to Polymode GitHub project. [homepage]: Change URL to polymode GitHub project. [description]: Realign text. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Joseph LaFreniere
2019-07-08gnu: i3blocks: Update to ec050e7....* gnu/packages/wm.scm (i3blocks): Update to ec050e7. Signed-off-by: Ludovic Courtès <ludo@gnu.org> ison
2019-07-08gnu: dosfstools: Enable compat symlinks....Enable compatibility symlinks to provide commands such as `mkfs.vfat`. * gnu/packages/disk.scm (dosfstools)[arguments]: Pass "--enable-compat-symlinks" to configure. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois
2019-07-08gnu: wireservice: New wireservice-package macro....Replace the parent 'base-package' variable with a 'wireservice-package' macro that includes all common package fields. * gnu/packages/wireservice.scm (base-package): Delete. (wireservice-package): New macro. (python-leather, python-agate, python-agate-sql, python-agate-dbf, python-agate-excel): Use wireservice-package. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois
2019-07-08gnu: gobject-introspection: Update absolute-shlib-path.patch....Incorporate some changes from nixpkgs to the gobject-introspection package patches. This is motivated by looking at issues with libsoup and lollypop. These changes mean that the share/gir-1.0/Soup-2.4.gir file within libsoup (and the corresponding binary typelib) references libsoup-2.4.so.1 with an absolute filename, whereas previously, the filename wasn't absolute. With an absolute filename in the typelib, loading libsoup from lollypop should work. * gnu/packages/patches/gobject-introspection-absolute-shlib-path.patch: Incorporate changes from nixpkgs. Christopher Baines
2019-07-08gnu: gama: Update to 2.06....* gnu/packages/gps.scm (gama): Update to 2.06. Efraim Flashner
2019-07-07gnu: diffoscope: Update to 116....* gnu/packages/package-management (diffoscope): Update to 116. Vagrant Cascadian
2019-07-08gnu: python-pytest: Update to 4.4.2....This is necessary to fix a test failure on 32-bit platforms in 4.4.1. * gnu/packages/check.scm (python-pytest): Update to 4.4.2. Marius Bakke
2019-07-08gnu: python-pluggy: Update to 0.11.0....* gnu/packages/python-xyz.scm (python-pluggy): Update to 0.11.0. Marius Bakke
2019-07-08gnu: webkitgtk: Build with Python 3....* gnu/packages/webkit.scm (webkitgtk)[native-inputs]: Change PYTHON-2 to PYTHON-WRAPPER. Marius Bakke
2019-07-07gnu: jalv: Remove GCC5 workaround....* gnu/packages/audio.scm (jalv)[arguments]: Remove <#:phases>. Marius Bakke
2019-07-07gnu: mesa: Use the "release" Meson build type....* gnu/packages/gl.scm (mesa)[arguments]: Add <#:build-type>. Marius Bakke
2019-07-07gnu: doxygen: Build with Python 3....* gnu/packages/documentation.scm (doxygen)[native-inputs]: Change PYTHON-2 to PYTHON. Marius Bakke
2019-07-07gnu: doxygen: Don't build against special Flex variant....* gnu/packages/documentation.scm (doxygen)[native-inputs]: Change FLEX-2.6.1 to FLEX. Marius Bakke
2019-07-07gnu: libinput: Use the 'release' Meson build type....* gnu/packages/freedesktop.scm (libinput)[arguments]: Add <#:build-type>. Marius Bakke
2019-07-07gnu: libpsl: Python is a native input....* gnu/packages/web.scm (libpsl)[inputs]: Move PYTHON-WRAPPER ... [native-inputs]: ... here. Marius Bakke
2019-07-07gnu: graphite2: Build against Python 3....Previously, the Python tests were skipped, because they require Python 3. * gnu/packages/fontutils.scm (graphite2)[arguments]: New field. [native-inputs]: Change PYTHON-2 and PYTHON2-FONTTOOLS to PYTHON and PYTHON-FONTTOOLS. Marius Bakke
2019-07-07gnu: zziplib: Don't run failing tests....* gnu/packages/compression.scm (zziplib)[arguments]: Set <#:test-target>. Marius Bakke
2019-07-07gnu: zziplib: Don't use unstable tarball....* gnu/packages/compression.scm (zziplib)[source]: Change to GIT-FETCH. [argumnents]: New field. Marius Bakke
2019-07-07gnu: libpsl: Build against Python 3....* gnu/packages/web.scm (libpsl)[inputs]: Change PYTHON-2 to PYTHON-WRAPPER. Marius Bakke
2019-07-07gnu: ninja: Python is a regular input....Ninja uses Python at run time, so it must not be a native input. * gnu/packages/ninja.scm (ninja)[native-inputs]: Change to ... [inputs]: ... this. Marius Bakke
2019-07-07gnu: ninja: Build against Python 3....* gnu/packages/ninja.scm (ninja)[native-inputs]: Change PYTHON-2 to PYTHON-WRAPPER. Marius Bakke
2019-07-07gnu: libevent: Use Python 3 for event_rpcgen.py....* gnu/packages/libevent.scm (libevent)[inputs]: Change PYTHON-2 to PYTHON-WRAPPER. Marius Bakke
2019-07-07gnu: itstool: Update to 2.0.6....* gnu/packages/glib.scm (itstool): Update to 2.0.6. [inputs]: Change PYTHON2-LIBXML and PYTHON-2 to PYTHON-LIBXML and PYTHON. * gnu/packages/gnome.scm (totem)[inputs]: Change PYTHON-2 to PYTHON. Marius Bakke
2019-07-07gnu: cURL: Build against Python 3....* gnu/packages/curl.scm (curl)[native-inputs]: Change PYTHON-2 to PYTHON-WRAPPER. Marius Bakke
2019-07-07gnu: icu4c: Enable tests on i686....* gnu/packages/icu4c.scm (icu4c)[arguments]: Don't override <#:tests?>. Marius Bakke
2019-07-07gnu: icu4c: Use 'python-minimal' for tests....* gnu/packages/icu4c.scm (icu4c)[native-inputs]: Change PYTHON to PYTHON-MINIMAL. Marius Bakke
2019-07-07gnu: Python: Avoid needless reference on coreutils....* gnu/packages/python.scm (python-2.7)[arguments]: Pass "INSTALL" and "MKDIR_P" in <#:configure-flags>. Marius Bakke
2019-07-07gnu: commencement: Fix Python build on non-x86 platforms....* gnu/packages/commencement.scm (python-boot0)[version, source]: Downgrade to 3.5.7. [arguments]: Remove <#:make-flags>. Add <#:phases>. [native-inputs]: Remove artifical dependency on PKG-CONFIG. Marius Bakke
2019-07-07gnu: Add csvkit....* gnu/packages/wireservice.scm (csvkit): New variable. * gnu/packages/patches/csvkit-fix-tests.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois
2019-07-07gnu: Add python-agate-excel....* gnu/packages/wireservice.scm (python-agate-excel): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois
2019-07-07gnu: Add python-agate-dbf....* gnu/packages/wireservice.scm (python-agate-dbf): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Pierre Langlois
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