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2022-06-12gnu: Add r-rsq....* gnu/packages/cran.scm (r-rsq): New variable. Ricardo Wurmus
2022-06-12Merge branch 'master' into stagingLudovic Courtès
2022-06-12gnu: Add emacs-corfu-doc-terminal....* gnu/packages/emacs-xyz.scm (emacs-corfu-doc-terminal): New variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com> jgart
2022-06-12gnu: Add emacs-corfu-terminal....* gnu/packages/emacs-xyz.scm (emacs-corfu-terminal): New variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com> jgart
2022-06-12gnu: llvm-14: Fix configure-flags for cross-compiling....* gnu/packages/llvm.scm (llvm-14)[arguments]: Fix syntax error in configure-flags when cross-compiling llvm. Efraim Flashner
2022-06-12gnu: zig: Limit to 64bit systems....* gnu/packages/zig.scm (zig)[supported-systems]: New field. Efraim Flashner
2022-06-12gnu: r-hdf5array: Update to 1.24.1....* gnu/packages/bioconductor.scm (r-hdf5array): Update to 1.24.1. Ricardo Wurmus
2022-06-12gnu: r-universalmotif: Update to 1.14.1....* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.14.1. Ricardo Wurmus
2022-06-12gnu: r-rsubread: Update to 2.10.2....* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.10.2. Ricardo Wurmus
2022-06-12gnu: r-clusterprofiler: Update to 4.4.2....* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.4.2. Ricardo Wurmus
2022-06-12gnu: r-monocle: Update to 2.24.1....* gnu/packages/bioconductor.scm (r-monocle): Update to 2.24.1. Ricardo Wurmus
2022-06-12gnu: r-chippeakanno: Update to 3.30.1....* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.30.1. Ricardo Wurmus
2022-06-12gnu: r-zellkonverter: Update to 1.6.2....* gnu/packages/bioconductor.scm (r-zellkonverter): Update to 1.6.2. Ricardo Wurmus
2022-06-12gnu: r-keggrest: Update to 1.36.2....* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.36.2. Ricardo Wurmus
2022-06-12gnu: r-genomicfeatures: Update to 1.48.3....* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.48.3. Ricardo Wurmus
2022-06-12gnu: r-biocparallel: Update to 1.30.3....* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.30.3. [propagated-inputs]: Add r-codetools. Ricardo Wurmus
2022-06-12gnu: r-deepsnv: Update to 1.42.1....* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.42.1. Ricardo Wurmus
2022-06-12gnu: java-plexus-component-metadata: Fix package....* gnu/packages/java.scm (java-plexus-component-metadata): Apply fix for newer jdom. Julien Lepiller
2022-06-08Merge branch 'master' into stagingLudovic Courtès
2022-06-08gnu: Add emacs-pyimport....* gnu/packages/emacs-xyz.scm (emacs-pyimport): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> jgart via Guix-patches via
2022-06-08gnu: Add emacs-toodoo....* gnu/packages/emacs-xyz.scm (emacs-toodoo): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Stefan Reichör
2022-06-08gnu: Add emacs-opencl-mode....* gnu/packages/emacs-xyz.scm (emacs-opencl-mode): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Thomas Albers
2022-06-07gnu: timescaledb: Adjust test preparation to PostgreSQL 13.6....The previous method of making a union with symlinks would work with 13.4 but not with 13.6, which has an extra 'canonicalize_path' call in 'find_my_exec'. * gnu/packages/databases.scm (timescaledb)[arguments]: In 'prepare-tests', pass #:symlink argument to 'union-build'. Ludovic Courtès
2022-06-05gnu: postgresql@10: Fix manual compilation....This is a followup to f0227a18c2394d3403d0265f3c700cfd9d1ee5b4. * gnu/packages/databases.scm (postgresql-10)[native-inputs]: New field. Ludovic Courtès
2022-06-05gnu: docbook-sgml: Add 4.2....* gnu/packages/docbook.scm (docbook-sgml-4.2, docbook-sgml-4.1): New variables. (docbook-sgml): Make an alias to 'docbook-sgml-4.1'. Ludovic Courtès
2022-06-05gnu: go: Make 'make-go-std' memoizing....* gnu/packages/golang.scm (make-go-std): Use 'mlambdaq'. Ludovic Courtès
2022-06-05gnu: go-std: Make public....* gnu/packages/golang.scm (go-std-1.14, go-std-1.16, go-std-1.17): New variables. Ludovic Courtès
2022-06-05gnu: emacs-rainbow-mode: Update to 1.0.6....* gnu/packages/emacs-xyz.scm (emacs-rainbow-mode): Update to 1.0.6. Tobias Geerinckx-Rice
2022-06-05gnu: emacs-undo-tree: Update to 0.8.2....* gnu/packages/emacs-xyz.scm (emacs-undo-tree): Update to 0.8.2. Tobias Geerinckx-Rice
2022-06-05gnu: emacs-ghub: Update to 3.5.6....* gnu/packages/emacs-xyz.scm (emacs-ghub): Update to 3.5.6. Tobias Geerinckx-Rice
2022-06-05gnu: putty: Update to 0.77....* gnu/packages/networking.scm (putty): Update to 0.77. [build-system]: Switch to CMAKE-BUILD-SYSTEM. [arguments]: Remove the old 'chdir phase. Add a custom 'check phase. [native-inputs]: Add perl. Tobias Geerinckx-Rice
2022-06-05gnu: emacs-d-mode: Update to 2.0.12....* gnu/packages/emacs-xyz.scm (emacs-d-mode): Update to 2.0.12. Tobias Geerinckx-Rice
2022-06-05gnu: openmpi: Update to 4.1.4....* gnu/packages/mpi.scm (openmpi): Update to 4.1.4. Tobias Geerinckx-Rice
2022-06-07gnu: Add emacs-xah-fly-keys....* gnu/packages/emacs-xyz.scm (emacs-xah-fly-keys): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Jai Vetrivelan
2022-06-07gnu: emacs-plz: Update to 0.1....* gnu/packages/emacs-xyz (emacs-plz): Update to 0.1. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Aleksandr Vityazev
2022-06-07gnu: emacs-evil-collection: Update to 0.0.8....* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 0.0.8. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> Rostislav Svoboda
2022-06-07gnu: emacs-modus-themes: Update to 2.4.0....* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 2.4.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> André A. Gomes
2022-06-07gnu: Add emacs-popon....* gnu/packages/emacs-xyz.scm (emacs-popon): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> jgart via Guix-patches via
2022-06-07gnu: Add xwhite....* gnu/packages/xdisorg.scm (xwhite): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> derekchuank@outlook.com
2022-06-07gnu: Add edlin....* gnu/packages/text-editors.scm (edlin): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Foo Chuan Wei
2022-06-07gnu: nyacc: Update to 1.07.0....* gnu/packages/mes.scm (nyacc): Update to 1.07.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Lechner
2022-06-07gnu: guile-fibers: Update to 1.1.1....* gnu/packages/guile-xyz.scm (guile-fibers-1.1): Update to 1.1.1. Ludovic Courtès
2022-06-07gnu: Remove unused patch....* gnu/packages/patches/python-flake8-polyfill-flake8-4-compat.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Efraim Flashner
2022-06-07gnu: python-debian: Set version to build reproducibly....* gnu/packages/python-xyz.scm (python-debian)[arguments]: Add 'set-version phase. Vagrant Cascadian
2022-06-07gnu: offlate: Fix build....* gnu/packages/python-xyz.scm (offlate) [phases]{patch-for-pygit2}: New phase. Maxim Cournoyer
2022-06-07gnu: python-pygit2: Update to 1.9.2 and enable tests....* gnu/packages/python-xyz.scm (python-pygit2): Update to 1.9.2. [tests?]: Delete argument. [phases]{check}: New phase override. [description]: Fix sentence. Maxim Cournoyer
2022-06-07gnu: python-pygmsh: Update to 7.1.17....* gnu/packages/simulation.scm (python-pygmsh): Update to 7.1.17. [source]: Remove snippet and modules fields. [origin]: Prefix tag by "v". [phases]: Delete trailing #t. {workaround-gmsh-detection-failure}: New phase. {build, install}: New phase overrides. {check}: Honor tests and remove extraneous add-installed-pythonpath call. [native-inputs]: Remove wheel. Add python-pypa-build and python-flit-core. [propagated-inputs]: Remove python-importlib-metadata. Maxim Cournoyer
2022-06-07gnu: python-xunitparser: Update to 1.3.4....* gnu/packages/python-check.scm (python-xunitparser): Update to 1.3.4. Maxim Cournoyer
2022-06-07gnu: nikola: Update to 8.2.2....* gnu/packages/python-xyz.scm (nikola): Update to 8.2.2. Maxim Cournoyer
2022-06-07gnu: electron-cash: Apply new style to inputs and use gexps....* gnu/packages/finance.scm (electron-cash)[phases]: Use gexps. [inputs]: Use new style. Maxim Cournoyer
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