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2021-12-01gnu: Add python-lsp-jsonrpc....* gnu/packages/python-xyz.scm (python-jsonrpc-server): Delete variable. * gnu/packages/python-xyz.scm (python-lsp-jsonrpc): New variable. Removes deprecated python-jsonrpc-server package and adds maintained fork. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> jgart via Guix-patches via
2021-12-01gnu: python-jedi: Update to 0.18.1....* gnu/packages/python-xyz.scm (python-jedi): Update to 0.18.1. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> jgart
2021-12-01gnu: python2-jedi: Remove package....* gnu/packages/python-xyz.scm (python2-jedi): Delete variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> jgart via Guix-patches via
2021-12-01gnu: python-parso: Update to 0.8.2....* gnu/packages/python-xyz.scm (python-parso): Update to 0.8.2. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> jgart via Guix-patches via
2021-12-01gnu: yggdrasil: Update to 0.4.1....* gnu/packages/networking.scm (yggdrasil): Update to 0.4.1. * gnu/packages/patches/yggdrasil-extra-config.patch: Update for new version. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: yggdrasil: Update to 0.4.0....* gnu/packages/patches/yggdrasil-extra-config.patch: Update patch. * gnu/packages/networking.scm (yggdrasil): Update to 0.4.0. [arguments]: Also install genkeys. [propagated-inputs]: Remove go-github-com-cheggaaa-pb; add go-golang-org-x-sys, go-github-com-mattn-go-runewidth, go-github-com-mattn-go-isatty, go-github-com-fatih-color, go-github-com-cheggaaa-pb-v3, go-github-com-vividcortex-ewma, and go-github-com-arceliar-ironwood. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: Add go-github-com-arceliar-ironwood....* gnu/packages/golang.scm (go-github-com-arceliar-ironwood): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: Rename go-github-com-cheggaaa-pb to go-github-com-cheggaaa-pb-v3....* gnu/packages/golang.scm (go-github-com-cheggaaa-pb): Rename this variable... (go-github-com-cheggaaa-pb-v3): ...to this variable. (go-github-com-cheggaaa-pb): New variable for deprecated package. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: go-github-com-cheggaaa-pb: Update to 3.0.8....* gnu/packages/golang.scm (go-github-com-cheggaaa-pb): Update to 3.0.8. [arguments]: Disable tests; update import path. [native-inputs]: Move go-github-com-mattn-go-isatty from here... [propagated-inputs]: ...to here; add go-github-com-vividcortex-ewma and go-github-com-rivo-uniseg. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: Add go-github-com-mattn-go-runewidth....* gnu/packages/golang.scm (go-github-com-mattn-go-runewidth): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: Add go-github-com-rivo-uniseg....* gnu/packages/golang.scm (go-github-com-rivo-uniseg): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: Add go-github-com-vividcortex-ewma....* gnu/packages/golang.scm (go-github-com-vividcortex-ewma): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> raingloom
2021-12-01gnu: Add python-mrkd....* gnu/packages/python-xyz.scm (python-mrkd): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> ZmnSCPxj via Guix-patches via
2021-12-01gnu: telescope: Update to 0.6.1....* gnu/packages/web-browsers.scm (telescope): Update to 0.6.1. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr> cage
2021-12-01gnu: cl-unix-opts: Update to 0.1.7-1.0e61f34....* gnu/packages/lisp-xyz.scm (sbcl-unix-opts): Update to 0.1.7-1.0e61f34. [source]: Fetch using commit instead of old tag. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> cage
2021-12-01gnu: cl-croatoan: Update to 0.0.1-4.cf87513....* gnu/packages/lisp-xyz.scm (sbcl-croatoan): Update to 0.0.1-4.cf87513. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> cage
2021-12-01gnu: Add julia-millboard....* gnu/packages/julia-xyz.scm (julia-millboard): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> jgart
2021-12-01gnu: Add julia-jive....* gnu/packages/julia-xyz.scm (julia-jive): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> jgart
2021-12-01gnu: Add julia-softglobalscope....* gnu/packages/julay-xyz.scm (julia-softglobalscope): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> jgart
2021-12-01gnu: Add dynaconf....* gnu/packages/python-xyz.scm (dynaconf): New variable. * gnu/packages/patches/dynaconf-Unvendor-dependencies.patch: New file. * local.mk (dist_patch_DATA): Register it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Giacomo Leidi
2021-12-01gnu: Add python-dotenv-0.13.0....* gnu/packages/python-xyz.scm (python-dotenv-0.13.0): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Giacomo Leidi
2021-12-01gnu: python-dotenv: Run test suite....* gnu/packages/python-xyz.scm (python-dotenv)[arguments]: Add custom 'check phase. Efraim Flashner
2021-12-01gnu: Add python-dotenv....* gnu/packages/python-xyz.scm (python-dotenv): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> Giacomo Leidi
2021-12-01gnu: python2-numpydoc: Update to 0.9.1....* gnu/packages/python-xyz.scm (python2-numpydoc): Update to 0.9.1; do not inherit from Python 3 variant. Ricardo Wurmus
2021-12-01gnu: python-numpydoc: Update to 1.1.0....* gnu/packages/python-xyz.scm (python-numpydoc): Update to 1.1.0. [arguments]: Override 'check phase to run tests. [native-inputs]: Remove python-nose; add python-matplotlib, python-pytest, and python-pytest-cov. Ricardo Wurmus
2021-12-01gnu: Add python-mwparserfromhell....* gnu/packages/python-web.scm (python-mwparserfromhell): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Alice BRENON
2021-12-01gnu: ruby-mocha: Update to 1.13.0....* gnu/packages/ruby.scm (ruby-mocha): Update to 1.13.0. [home-page]: Update to new location. Efraim Flashner
2021-12-01gnu: cl-yxorp: Update to 0.4....* gnu/packages/lisp-xyz.scm (sbcl-yxorp): Update to 0.4. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Charles
2021-12-01gnu: Add cl-liballegro....* gnu/packages/lisp-xyz.scm: (sbcl-cl-liballegro, ecl-cl-liballegro, cl-liballegro): New variables. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net> Sharlatan Hellseher
2021-12-01gnu: Add r-phyloseq....* gnu/packages/cran.scm (r-phyloseq): New variable Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Nicolas Vallet
2021-11-30gnu: Add r-fmcsr....* gnu/packages/bioconductor.scm (r-fmcsr): New variable. Ricardo Wurmus
2021-11-30gnu: python-cloudscraper: Update to 1.2.58....* gnu/packages/python-web.scm (python-cloudscraper): Update to 1.2.58. [source]: Do not delete as many files in snippet; fetch sources via git. [arguments]: Add build phase 'fix-references; replace 'check phase. [inputs]: Add node. [propagated-inputs]: Add python-js2py, python-polling2, and python-responses. Ricardo Wurmus
2021-11-30gnu: Add python-polling2....* gnu/packages/python-xyz.scm (python-polling2): New variable. Ricardo Wurmus
2021-11-30gnu: Add python-js2py....* gnu/packages/python-web.scm (python-js2py): New variable. Ricardo Wurmus
2021-11-30gnu: Add python-pyjsparser....* gnu/packages/python-web.scm (python-pyjsparser): New variable. Ricardo Wurmus
2021-11-30gnu: Add r-seuratdata....* gnu/packages/cran.scm (r-seuratdata): New variable. Ricardo Wurmus
2021-11-30gnu: guile-wisp: Update to 1.0.6....* gnu/packages/guile-xyz.scm (guile-wisp): Update to 1.0.6. Ricardo Wurmus
2021-11-30gnu: guile-wisp: Remove trailing #T....* gnu/packages/guile-xyz.scm (guile-wisp)[arguments]: Remove trailing #T. Ricardo Wurmus
2021-11-30gnu: emacs-fountain-mode: Update to 3.6.0....* gnu/packages/emacs-xyz.scm (emacs-fountain-mode): Update to 3.6.0. Nicolas Goaziou
2021-11-30gnu: emacs-tramp: Update to 2.5.1.5....* gnu/packages/emacs-xyz.scm (emacs-tramp): Update to 2.5.1.5. Nicolas Goaziou
2021-11-30gnu: Add r-rbokeh....* gnu/packages/cran.scm (r-rbokeh): New variable. Co-authored-by: Ricardo Wurmus <rekado@elephly.net> Hong.Li@mdc-berlin.de
2021-11-30gnu: Add r-gistr....* gnu/packages/cran.scm (r-gistr): New variable. Hong.Li@mdc-berlin.de
2021-11-30gnu: r-crul: Update to 1.2.0....* gnu/packages/cran.scm (r-crul): Update to 1.2.0. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Hong Li
2021-11-30gnu: Add python-woob....* gnu/packages/python-web.scm (python-woob): New variable. Ricardo Wurmus
2021-11-30gnu: Add python-xunitparser....* gnu/packages/python-check.scm (python-xunitparser): New variable. Ricardo Wurmus
2021-11-30gnu: r-umi4cpackage: Embed references to perl and bowtie2....* gnu/packages/bioinformatics.scm (r-umi4cpackage)[arguments]: Add build phases to patch calls of bowtie2 and perl. [inputs]: Add perl and bowtie. [synopsis]: Remove trailing period. Ricardo Wurmus
2021-11-30gnu: coq: Update to 8.14.0....* gnu/packages/coq.scm (coq): Update to 8.14.0. (coq-bignums): Update to 8.14.0. (coq-equations): Update to 1.3. * gnu/packages/patches/coq-fix-envvars.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Julien Lepiller
2021-11-30gnu: proof-general: Update to latest commit....* gnu/packages/coq.scm (proof-general): Update to latest commit. [license]: Change to glp3+. Julien Lepiller
2021-11-30gnu: coq-semantics: Update to 8.14.0....* gnu/packages/coq.scm (coq-semantics): Update to 8.14.0. Julien Lepiller
2021-11-30services: Accept <inferior-package>s in lieu of <package>s....* gnu/services/authentication.scm (fprintd-configuration) (nslcd-configuration): Substitute file-like objects for package ones. * gnu/services/cgit.scm (cgit-configuration, opaque-cgit-configuration): Likewise. * gnu/services/cups.scm (package-list?, cups-configuration): Likewise. * gnu/services/dns.scm (verify-knot-configuration) (ddclient-configuration): Likewise. * gnu/services/docker.scm (docker-configuration): Likewise. * gnu/services/file-sharing.scm (transmission-daemon-configuration): Likewise. * gnu/services/getmail.scm (getmail-configuration): Likewise. * gnu/services/mail.scm (dovecot-configuration) (opaque-dovecot-configuration): Likewise. * gnu/services/messaging.scm (prosody-configuration) (opaque-prosody-configuration): Likewise. * gnu/services/monitoring.scm (zabbix-server-configuration) (zabbix-agent-configuration): Likewise. * gnu/services/networking.scm (opendht-configuration): Likewise. * gnu/services/pm.scm (tlp-configuration): Likewise. * gnu/services/telephony.scm (jami-configuration): Likewise. * gnu/services/virtualization.scm (libvirt-configuration) (qemu-guest-agent-configuration): Likewise. * gnu/services/vpn.scm (openvpn-client-configuration): Likewise. Tobias Geerinckx-Rice