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2023-12-04gnu: Add python-ndim.Felix Gruber
* gnu/packages/maths.scm (python-ndim): New variable. Change-Id: I543f1f5e195f4f2fd5bd70f9ce29ec750a24439b Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: Add python-accupy.Felix Gruber
* gnu/packages/maths.scm (python-accupy): New variable. * gnu/packages/patches/python-accupy-fix-use-of-perfplot.patch: New file. * gnu/packages/patches/python-accupy-use-matplotx.patch: New file. * gnu/local.mk (dist_patch_DATA): Add new patch files. Change-Id: I0222665d54a36830844b3b33e3dcb546741cfaa1 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: Add python-pyfma.Felix Gruber
* gnu/packages/python-science.scm (python-pyfma): New variable. Change-Id: I354d3d56f2799c8c9ac9b868fcacbf88dcc5c25d Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: Add python-perfplot.Felix Gruber
* gnu/packages/python-xyz.scm (python-perfplot): New variable. Change-Id: I04266dfd7081bd3f917a48b2667137b829680498 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: Add python-cplot.Felix Gruber
* gnu/packages/python-xyz.scm (python-cplot): New variable. Change-Id: I8e634799954b120e00d900ae26b16af1717d4474 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: Add python-npx.Felix Gruber
* gnu/packages/python-xyz.scm (python-npx): New variable. Change-Id: I9520ce12a936c68d38f2ac706165eff816d8b1ad Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: Add python-matplotx.Felix Gruber
* gnu/packages/python-xyz.scm (python-matplotx): New variable. Change-Id: I354732edeaa30cbae506e78a16f42e66edb3011b Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: Add python-meshzoo.Felix Gruber
* gnu/packages/python-science.scm (python-meshzoo): New variable. Change-Id: Ia41d62ebd6c4cb3c22ebe0668c36279a9ca191ac Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: beep: Add phase install-rules.Nicolas Graves
* gnu/packages/terminals.scm (beep): Add phase install-rules. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-04gnu: abseil-cpp: Update to 20230802.1.Greg Hogan
* gnu/packages/cpp.scm (abseil-cpp): Update to 20230802.1. [arguments]<#:phases>: Add phase to set timezone environment variable. * gnu/packages/cpp.scm (abseil-cpp-20220623.1): Keep old version. * gnu/packages/cpp.scm (abseil-cpp-for-c++-standard): Accept package to inherit from. * gnu/packages/cpp.scm (abseil-cpp-cxxstd11, abseil-cpp-cxxstd17): Inherit from latest supported version. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Change-Id: I7c29e1cd980b04496000eeb038529cdc6f636cb7
2023-12-04gnu: wxwidgets: Update to 3.2.3.Andy Tai
* gnu/packages/wxwidgets.scm (wxwidgets): Update to 3.2.3 Signed-off-by: Ludovic Courtès <ludo@gnu.org> Change-Id: I2f3a6f89d2a5b931c70c6509c8165027424e5ed0
2023-12-04gnu: python-cdflib: Disable shaky test.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-cdflib): Disable one test which causes random build failure. [arguments]{test-flags}: Add it. Change-Id: I05ee2feca3bc0f0139fa1a5f00b4fe260b42ec80 Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-12-04gnu: octave: Update to 8.4.0Andy Tai
* gnu/packages/maths.scm (octave-cli): Update to 8.4.0 Change-Id: I88fe31a25a3fbfc28985f5f0b51cb042369f4462 Signed-off-by: Eric Bavier <bavier@posteo.net>
2023-12-04gnu: ddcutil: Update to 1.4.5.Greg Hogan
* gnu/packages/hardware.scm (ddcutil): Update to 1.4.5. Change-Id: I293c09af1020bcc02d9d99d636a2e64ebc25ad58 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-04gnu: Add julia-astrolib.Sharlatan Hellseher
* gnu/packages/julia-xyz.scm (julia-astrolib): New variable. Change-Id: I41fc21728b3bc2d20c2e6c83a6ea1185086a015e Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-03gnu: xpra: Update to 5.0.4.Andy Tai
* gnu/packages/xorg.scm (xpra): Update to 5.0.4 Change-Id: Id995cd3176628ff2034ccce139b01786b54dc91d Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-03gnu: gmnisrv: Fix typo.Michal Atlas
* gnu/services/web.scm (gmnisrv-service-type): Change the service name to gmnisrv Change-Id: I1ca46c312db851486313c431fe0454786f0a673e Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-03gnu: kpackage: Work around flaky test.Leo Nikkilä
When parallel tests are enabled, plasma-querytest can fail with: 5/11 Test #5: plasma-querytest ....................Subprocess aborted***Exception: 0.02 sec ********* Start testing of QueryTest ********* Config: Using QtTest library 5.15.10, Qt 5.15.10 (arm64-little_endian-lp64 shared (dynamic) release build; by GCC 11.3.0), unknown unknown PASS : QueryTest::initTestCase() QFATAL : QueryTest::installAndQuery() QThread: Destroyed while thread is still running FAIL! : QueryTest::installAndQuery() Received a fatal error. Loc: [Unknown file(0)] Totals: 1 passed, 1 failed, 0 skipped, 0 blacklisted, 3ms ********* Finished testing of QueryTest ********* I'm able to consistently reproduce this on an aarch64-linux machine. `guix build --cores=1' can also work around this. * gnu/packages/kde-frameworks.scm (kpackage): Work around flaky test. [arguments]<#:parallel-tests?>: Disable. Follows what Debian has done. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-03gnu: xe: Update to 1.0.Greg Hogan
* gnu/packages/parallel.scm (xe): Update to 1.0. Change-Id: If881efcd1db46fddd33b48e044ea02ee73e4a98e Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-03gnu: xonsh: Update to 0.14.2.Greg Hogan
* gnu/packages/shells.scm (xonsh): Update to 0.14.2. Change-Id: Id21fa37467aa8dbcc58330108c4b7bc19a46949f Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-03gnu: Add python-islenska.Spencer King
* gnu/packages/python-xyz.scm (python-islenska): New variable. Change-Id: Id9acd04d625bbbdef0438b1b98b73550e826088d Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-03gnu: igt-gpu-tools: Update to 1.28Gabriel Wicki
* gnu/packages/admin.scm (igt-gpu-tools): Update to 1.28. [source]: Remove patch. [inputs]: Add python. * gnu/packages/patches/igt-gpu-tools-Use-libproc2.patch: Remove. * gnu/local.mk (dist_patch_DATA): Remove it. Change-Id: I5dccd7d5a5df0084fabf713949940775671aecd7 Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2023-12-03gnu: mes: Update to 0.26.Janneke Nieuwenhuizen
* gnu/packages/mes.scm (mes): Update to 0.26. Change-Id: I0c88da0de34014aa10d317db1e997cb015e23d28
2023-12-03gnu: ncdu-2: Mark as tunable.Efraim Flashner
* gnu/packages/ncdu.scm (ncdu-2)[properties]: Mark package as tunable. Change-Id: I9cd9bd45be6c32c44da983432d69128657b98591
2023-12-03gnu: zig: Add tuning information.Efraim Flashner
* gnu/packages/zig.scm (zig-0.9, zig-0.10)[properties]: Add clang-properties matching input clang packages. Change-Id: Ib4a665a29e925b85d0e7695810a8889951dd1602
2023-12-03gnu: llvm: Export clang-properties.Efraim Flashner
* gnu/packages/llvm.scm (clang-properties): Export variable. Change-Id: If5ef5219c3d29a347ae5ad97584c23bafdabf836
2023-12-03gnu: ncdu-2: Remove redundant make-flag.Efraim Flashner
* gnu/packages/ncdu.scm (ncdu-2)[arguments]: Remove make-flag setting CPU to baseline. Change-Id: If2770d381404621648f53a8e64da8ffafcc33a8d
2023-12-03gnu: zig: Build with baseline cpu by default.Ekaitz Zarraga
* gnu/packages/patches/zig-use-baseline-cpu-by-default.patch: Add file. * gnu/packages/zig.scm (zig-0.10.1): Apply patch above. * gnu/local/mk (dist_patch_DATA): Register it. Change-Id: I40bd28071c97c0dd0a907c704072b52b26d2de28 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2023-12-02gnu: ldc: Update to 1.35.0.Efraim Flashner
* gnu/packages/dlang.scm (ldc-bootstrap): Update to 1.35.0. [arguments]: Adjust configure-flags to not build shared libraries. (ldc)[arguments]: Adjust configure-flags to remove defaults. Adjust 'patch-paths-in-tests phase for another hardcoded /bin/bash. Delete another test. Change-Id: Ie284a97ecda2689e6ed84a902eff990cfae8c195
2023-12-02gnu: python-lit: Update to 17.0.6.Efraim Flashner
* gnu/packages/check.scm (python-lit): Update to 17.0.6. [native-inputs]: Remove llvm-14; add llvm. Change-Id: I45ccc5302c2481b82f26201e66994e15eeaecc9d
2023-12-02gnu: ldc: Enable building on more architectures.Efraim Flashner
* gnu/packages/dlang.scm (ldc)[arguments]: In the custom phase 'fix-compiler-rt-library-discovery rewrite gnu-triplet->clang-arch to pass-through unmatched architectures.
2023-12-02gnu: josm: Reduce closure size.Julien Lepiller
This saves 240MB of closure size. * gnu/packages/geo.scm (josm)[inputs]: Add openjdk11. [arguments]: Filter native inputs out of CLASSPATH. Use `java' from openjdk11 instead of the JDK. Change-Id: Ifa03b5cd033c5866d22e7557119284be0ea25a0e
2023-12-02gnu: java-openjfx-graphics: Make java-swt optional.Julien Lepiller
It is used for an optional part of openjfx and not used by current packages in Guix. Swt has a reference to a library in the JDK and has a huge closure size because of that. This reduces closure by 1GB for this package and dependents (including josm). * gnu/packages/java.scm (java-openjfx-graphics)[native-inputs]: Move java-swt... [inputs]: ...to here. Change-Id: I7d8cb14569d5a9f451944695225a2dff143bf190
2023-12-02gnu: javacc: Do not reference a jdk.Julien Lepiller
The jdk provides java and javac, while a jre only provides the necessary java, reducing the closure size by 350MB. * gnu/packages/java.scm (javacc): Remove #t at end of phases. [inputs]: Add icedtea-8 as the jre. [arguments]: Use it instead of the jdk. Change-Id: Icb218c40915550b7ff1db96a48a3c48fa6ef52b4
2023-12-02gnu: hut: Update to 0.4.0Filip Lajszczak
* gnu/packages/version-control.scm (hut): Update to 0.4.0 Change-Id: Ib5dc28de6dbc3b69ca55a9530b923f71ca0ce7b5 Signed-off-by: Andrew Tropin <andrew@trop.in> Co-authored-by: Andrew Tropin <andrew@trop.in>
2023-12-02gnu: go-git-sr-ht-emersion-gqlclient: Update to ↵Filip Lajszczak
0.0.0-20230820050442-8873fe0204b9 * gnu/packages/golang.scm (go-git-sr-ht-emersion-gqlclient): Update to 0.0.0-20230820050442-8873fe0204b9 Change-Id: I15a35a0f25dd248938839ae766569e6fbf304ed6 Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-12-02gnu: guix: Update to 1.4.0-16.aeb494322c.Janneke Nieuwenhuizen
* gnu/packages/package-management.scm (guix): Update to 1.4.0-16.aeb494322c. Change-Id: Iae1af05094a1a589096a77ed61cf11dcec50f7a8
2023-12-02gnu: d-tools: Update to 2.105.3.Hugo Nobrega
The previous version 2.100 was failing in `check` due to changes to the Phobos stdlib * gnu/packages/dlang.scm (d-tools): Update to 2.105.3. Change-Id: Id9e4580d555c735fb0eebe880928ef2f558f959e Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-02gnu: Add python-scikit-learn-extra.Timothee Mathieu
* gnu/packages/machine-learning.scm (python-scikit-learn-extra): New variable. Change-Id: I50992ceaa76608f3345df6d74a5d9e4aa7c485a5 gnu/packages/machine-learning.scm | 41 +++++++++++++++++++++++++++++++ 1 file changed, 41 insertions(+) Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-02gnu: python-pythonanywhere: Update to 0.12.1Filip Lajszczak
* gnu/packages/python-xyz.scm (python-pythonanywhere): Update to 0.12.1 Change-Id: I3436ed7fbbe3e3dae2c5e47fa1c96cc0fd750f76 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-02gnu: igraph: Update to 0.10.7.David Elsing
* gnu/packages/graph.scm (igraph): Update to 0.10.7. [source]: Use git-fetch. Apply patch. <snippet>: Remove the entire "vendor" and "src/isomorphism/bliss" directories. Patch CMakeLists.txt to not build and use vendored dependencies. [arguments]: Add -DIGRAPH_INTEGER_SIZE=64 to #:configure-flags. Add phases to use unbundled libraries and build documentation. [native-inputs]: Add bison, docbook-xml-4.3, docbook-xsl, flex, pcg-c, python, source-highlight and xmlto. [inputs]: Remove gmp and libxml2. Add bliss and suitesparse-cxsparse. * gnu/packages/patches/igraph-fix-varargs-integer-size.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-02gnu: Add pcg-c.David Elsing
* gnu/packages/c.scm (pcg-c): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-12-02gnu: Use ‘libc-utf8-locales-for-target’.Janneke Nieuwenhuizen
* guix/packages.scm (%standard-patch-inputs): Use ‘libc-utf8-locales-for-target’ instead of ‘glibc-utf8-locales’. * guix/self.scm (%packages): Likewise. * gnu/home/services/ssh.scm (file-join): Likewise * gnu/installer.scm (build-compiled-file): Likewise. * gnu/packages/chromium.scm (ungoogled-chromium/wayland): Likewise. * gnu/packages/gnome.scm (libgweather4, tracker): Likewise. * gnu/packages/javascript.scm (js-mathjax): Likewise. * gnu/packages/package-management.scm (guix, flatpak): Likewise. * gnu/packages/raspberry-pi.scm (raspi-arm64-chainloader): Likewise. * gnu/packages/suckless.scm (svkbd): Likewise. * gnu/services.scm (cleanup-gexp): Likewise. * gnu/services/base.scm (guix-publish-shepherd-service): Likewise. * gnu/services/guix.scm (guix-build-coordinator-shepherd-services) (guix-build-coordinator-agent-shepherd-services): Likewise. * gnu/services/guix.scm (guix-build-coordinator-queue-builds-shepherd-services): (guix-data-service-shepherd-services) (nar-herder-shepherd-services) (bffe-shepherd-services): Likewise. * gnu/services/web.scm (anonip-shepherd-service) (mumi-shepherd-services): Likewise. * gnu/system/image.scm (system-disk-image, system-iso9660-image) (system-docker-image, system-tarball-image): Likewise. * gnu/system/install.scm (%installation-services): Likewise. * guix/profiles.scm (info-dir-file): Likewise. (ca-certificate-bundle, profile-derivation): Likewise. * guix/scripts/pack.scm (store-database, set-utf8-locale): Likewise. * tests/pack.scm: Likewise. * tests/profiles.scm ("profile-derivation, cross-compilation"): Likewise. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Co-authored-by: Christopher Baines <mail@cbaines.net> Change-Id: I24239f427bcc930c29d2ba5d00dc615960a6c374
2023-12-02gnu: Add ‘libc-locales-for-target’ and related.Janneke Nieuwenhuizen
Partly fixes <https://issues.guix.gnu.org/66472>. This is a followup to 95ea1277ae2ebd278bdb51a7887f5ba1116fbc64. * gnu/packages/base.scm (glibc-locales/hurd): New variable (libc-locales-for-target): Use it in new procedure. (libc-utf8-locales-for-target): New procedure. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Change-Id: I16e187fcc65a5d4a3b065066b45ef9e45d1875f6
2023-12-02gnu: mes: Update to 0.25.1.Janneke Nieuwenhuizen
* gnu/packages/mes.scm (mes): Update to 0.25.1. (supported-systems): Remove aarch64-linux (building on aarch64-linux is only "supported" using armhf-linux compatibility). Change-Id: I97a95c1e246d5698db6d78f845a188826817f3be
2023-12-02gnu: mescc-tools: Update to 1.5.2.Janneke Nieuwenhuizen
* guix/git/mes.scm (mescc-tools): Update to 1.5.2. (arguments): Remove `patch-Kaem/test.sh' phase. Change-Id: I47d7f3159a1e6395ffbb9141147c9cbf0676f22b
2023-12-02gnu: python-sphinx-prompt: Fix tests.Lars-Dominik Braun
docutils>=0.19 broke the tests, which upstream fixed in a newer commit. Cherry-pick it. * gnu/packages/patches/python-sphinx-prompt-docutils-0.19.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/sphinx.scm (python-sphinx-prompt)[origin]: Use it. Change-Id: I597387a35e6a1da01063b4812e0f919788a13b54
2023-12-01gnu: emacs-magit: Update to 3.3.0-7.dda332b.Bruno Victal
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.3.0-7.dda332b. Copyright-paperwork-exempt: Yes Change-Id: Icb119958ec806f96ebe18567492a9611c56572e1 Signed-off-by: Andrew Tropin <andrew@trop.in>
2023-11-30gnu: guile-hoot: Update to 0.2.0.David Thompson
* gnu/packages/guile-xyz.scm (guile-hoot): Update to 0.2.0. Change-Id: I3bf5f457ef2359588889962ab3bbbc2d47b4a022
2023-11-30gnu: Add ecl-prompter.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (ecl-prompter): New variable. Change-Id: Ia109971456a95333d0867135f0ece141848ecfe6
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