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2018-06-05build-system/r: Update to Bioconductor 3.7....This is a follow-up to 41f17554d88795bf35fbfc3e05301a6d2f64cca0. * guix/build-system/r.scm (bioconductor-uri): Update to version 3.7. Ricardo Wurmus
2018-05-10gnu: android-make-stub: Update to 0.6.0....* gnu/packages/android.scm (android-make-stub): Update to 0.6.0. * guix/build-system/android-ndk.scm (android-ndk-build): Modify. (lower): Modify. Danny Milosavljevic
2018-05-10gnu: Add android-googletest....* gnu/packages/android.scm (android-googletest): New variable. * guix/build-system/android-ndk.scm (android-ndk-build): Use it. Danny Milosavljevic
2018-05-10build-system: android-ndk: Support unit tests....* guix/build-system/android-ndk.scm (android-ndk-build): Add googletest. * guix/build/android-ndk-build-system.scm (check): Check whether tests are enabled. Run root-level tests as well. Danny Milosavljevic
2018-05-09build: Add the Android NDK build-system....* guix/build-system/android-ndk.scm: New file. * guix/build/android-ndk-build-system.scm: New file. * Makefile.am: Add them. Danny Milosavljevic
2018-04-20build-system: emacs: Add improved check phase....* guix/build-system/emacs.scm (emacs-build): Add #:test-command keyword argument. Remove #:configure-flags and #:test-target keyword arguments. * guix/build/emacs-build-system.scm (check): New procedure. (%standard-phases): Register check phase after the build phase. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net> Maxim Cournoyer
2018-03-30gnu: rust: Update rust to 1.24.1....* gnu/packages/rust.scm (rust-bootstrap): Freeze bootstrap version to 1.22.1. Reorganize bootstrap binaries to match new "rust" package structure with two ouputs "out" with Rust compiler and "cargo" with Cargo package manager. Replace all "system*" by "invoke". (rust-1.23): Rename "rustc" to "rust". Update sha256 for tarball. Add cargo related dependencies. Install "cargo" as separate "rust" output. Remove substitutes for parts that were fixed in "rustc" source code. Install documentation to separate "doc" output. Update configuration according to changes in "rustc" source code. Replace all "system*" by "invoke". (rust): Create package for 1.24.1 rust release based on rust-1.23 release. * guix/build-system/cargo.scm (default-rust): Replace "default-cargo" and "default-rustc" functions with "default-rust" function. (cargo-build-system): Take only one package as "rust" source. Use "rustc" of default output of "rust" package, use "cargo" as "cargo" output of "rust" package. Nikolai Merinov
2018-03-20Revert "build-system/meson: Use 'target-arm32?' for armhf-linux case."...This requires adding (guix utils) to the build inputs, and causes too many rebuilds for now. This reverts commit 24a2e9172a2d8970d57865c6130f2184385183a3. Marius Bakke
2018-03-19build-system/meson: Use 'target-arm32?' for armhf-linux case....* guix/build-system/meson.scm (lower, meson-build): Replace armhf-linux detection with 'target-arm32?' macro. Efraim Flashner
2018-03-18Merge branch 'master' into stagingMarius Bakke
2018-03-12build-system/meson: Skip the 'fix-runpath' phase on armhf....* guix/build-system/meson.scm (lower): Remove DEFAULT-PATCHELF from inputs on armhf. (meson-build): Ignore the 'fix-runpath' phase when building for arm systems. Marius Bakke
2018-03-12build-system: minify: Do not import (ice-9 popen) in the build environment....The (ice-9 popen) module should not be added to the imported-modules here, because that depends on the Guile that is used on the host side. * guix/build-system/minify.scm (%minify-build-system-modules): Remove import of (ice-9 popen). Ricardo Wurmus
2018-02-28build-system/trivial: Add support for #:allowed-references....* guix/build-system/trivial.scm (lower): Add #:allowed-references and keep it in the 'arguments' field. (trivial-build): Add #:allowed-references. Add 'canonicalize-reference'. Pass #:allowed-references to 'build-expression->derivation'. (trivial-cross-build): Likewise. * tests/packages.scm ("trivial with #:allowed-references"): New test. Ludovic Courtès
2018-02-09Merge branch 'master' into core-updatesMark H Weaver
2018-02-05emacs-build-system: Reinstate the check phase....* guix/build/emacs-build-system.scm (%standard-phases): Reinstate the check phase from the gnu-build-system. * guix/build-system/emacs.scm (emacs-build)[tests?]: But do not enable it by default. [parallel-tests?]: Add argument. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maxim Cournoyer
2018-01-01build-system/glib-or-gtk: Don't generate 'icon-theme.cache'....* guix/build-system/glib-or-gtk.scm (glib-or-gtk-build): Don't generate 'icon-theme.cache'. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Danny Milosavljevic
2017-12-21build-system/gnu: Check whether the cross-libc has a "static" output....This is a followup to 614fffe4270cef308573a6d9cef650f3972875af, which broke cross-compilation to i686-w64-mingw32. * guix/build-system/gnu.scm (standard-cross-packages): Add "cross-libc:static" only when LIBC has a "static" output. Ludovic Courtès
2017-12-20build-system/gnu: Add the "static" output of libc in cross environments....Fixes a regression whereby the host libc.a would be missing when cross-compiling. This is a followup to commit 6dff905e51202bbdebbad8811b6509584d12a796. * guix/build-system/gnu.scm (standard-cross-packages): Add the "cross-libc:static". Ludovic Courtès
2017-12-19Merge branch 'master' into core-updatesMarius Bakke
2017-12-10build-system/asdf: Use 'mlambda'....* guix/build-system/asdf.scm (package-with-build-system): Use 'mlambda' instead of 'memoize'. Ludovic Courtès
2017-12-05Merge branch 'master' into core-updatesMarius Bakke
2017-11-30build-system: Add scons-build-system....* guix/build-system/scons.scm: New file. * guix/build/scons-build-system.scm: New file. * Makefile.am (MODULES): Register them. * doc/guix.texi (Build Systems): Add scons-build-system. Arun Isaac
2017-11-19Merge branch 'master' into core-updatesMarius Bakke
2017-11-17build-system/go: Don't let Go executables refer to the Go compiler....* guix/build/go-build-system.scm (remove-store-reference, remove-go-references): New procedures. (%standard-phases): Add 'remove-go-references' phase. * guix/build-system/go.scm (go-build): Add allow-go-reference? key. Leo Famulari
2017-11-08build-system/gnu: Add 'install-license-files' phase....Suggested by Dave Love <fx@gnu.org>. * guix/build-system/gnu.scm (%license-file-regexp): New variable. (gnu-build): Add #:license-file-regexp and use it. (gnu-cross-build): Likewise. * guix/build/gnu-build-system.scm (%license-file-regexp): New variable. (install-license-files): New procedure. (%standard-phases): Add it. Ludovic Courtès
2017-11-07guix: Add archive support for bioconductor-uri....* guix/build-system/r.scm (bioconductor-uri): Also return the archive URL. * guix/import/cran.scm (latest-bioconductor-release, fetch-description): Adjust because bioconductor-uri now returns a list. Ricardo Wurmus
2017-10-24build-system/go: Parameterize installing the source code....* guix/build-system/go.scm (go-build): Add install-source? key. * guix/build/go-build-system.scm (install-source): Check if install-source? is true. Leo Famulari
2017-10-21Use HTTPS for bioconductor.org....* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for bioconductor.org URLs. * gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter) (r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category) (r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews) (r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata) (r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi) (r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray) (r-summarizedexperiment, r-genomicalignments, r-rtracklayer) (r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern) (r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport) (r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid) (r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise. * gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene) (r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db) (r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db) (r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9) (r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene) (r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10) (r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]: Likewise. * gnu/packages/statistics.scm (r-rcurl)[source]: Likewise. * guix/build-system/r.scm (bioconductor-uri): Likewise. * guix/import/cran.scm (%cran-url, bioconductor-package?) (bioconductor-data-package?, bioconductor-experiment-package?): Likewise. Tobias Geerinckx-Rice
2017-10-12build: Add the Go build system....* guix/build-system/go.scm, guix/build/go-build-system.scm: New files. * Makefile.am (MODULES): Add new files. * doc/guix.texi (Build Systems): Document the go-build-system. Leo Famulari
2017-10-03guix: ant-build-system: Add #:test-include and #:test-exclude arguments....* guix/build-system/ant.scm: Add #:test-include and #:test-exclude arguments. * guix/build/ant-build-system.scm: Generate test list from arguments. * doc/guix.texi (Build Systems): Document it. Julien Lepiller
2017-10-03guix: ant-build-system: Add main-class support....* guix/build-system/ant.scm: New #:main-class argument * guix/build/ant-build-system.scm: Generate a manifest file with additional properties. * doc/guix.texi (Build Systems): Document it. Julien Lepiller
2017-09-26build-system: meson: Fix typo in variable name....* guix/build-system/meson.scm (lower): fix typo in glib-or-gtk?. Mohammed Sadiq
2017-09-16build-system: Add 'meson-build-system'....* Makefile.am (MODULES): Add 'guix/build-system/meson.scm' and 'guix/build/meson-build-system.scm'. * guix/build-system/meson.scm: New file. * guix/build/meson-build-system.scm: New file. * doc/guix.texi (Build Systems): Add 'meson-build-system'. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Peter Mikkelsen
2017-08-06Merge branch 'master' into core-updatesMark H Weaver
2017-08-04build: Add minify build system....* guix/build-system/minify.scm: New file. * guix/build/minify-build-system: New file. * Makefile.am (MODULES): Add new files. * doc/guix.texi (Build Systems): Document minify-build-system. Ricardo Wurmus
2017-07-10Merge branch 'master' into core-updatesLeo Famulari
2017-07-09build-system: texlive: Build union in configure phase....This allows us to use texmf.cnf instead of having to set all required environment variables manually. * guix/build/texlive-build-system.scm (configure): New procedure. (build): Simplify. (%standard-phases): Add configure phase. * guix/build-system/texlive.scm (texlive-build): Include (guix build union) in modules. (%texlive-build-system-modules): Likewise. Ricardo Wurmus
2017-06-26Merge branch 'master' into core-updatesMark H Weaver
2017-06-20gnu: Move contents of zip module into compression module....* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to... * gnu/packages/compression.scm: ...here. * gnu/packages/zip.scm: Delete file. * gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file. * po/packages/POTFILES.in: Unregister deleted file. * gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression, docbook, documentation, fonts, fpga, game-development, games, gl, gnome, gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice, markup, maths, mc, monitoring, music, php, pretty-print, python, scheme, smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml, zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm: Adapt module import. Arun Isaac
2017-06-20Merge branch 'master' into core-updatesMark H Weaver
2017-06-19build-system/texlive: Update to texlive-2017.1, revision 44591....* guix/build-system/texlive.scm (%texlive-tag): Change to texlive-2017.1. (%texlive-revision): Change to 44591. Ricardo Wurmus
2017-06-18Merge branch 'master' into core-updatesMark H Weaver
2017-06-15build-system: Add 'texlive-build-system'....* guix/build-system/texlive.scm: New file. * guix/build/texlive-build-system.scm: New file. * Makefile.am (MODULES): Add them. * doc/guix.texi (Build Systems): Document it. * gnu/packages/tex.scm (%texlive-tag, %texlive-revision): Remove variables. (texlife-ref): Remove procedure. Ricardo Wurmus
2017-06-10Merge branch 'master' into core-updatesMarius Bakke
2017-06-08build-system: emacs: Factorize include/exclude default arguments....The `install' phase of the emacs-build-system contained default arguments duplicated from the host side `emacs-build' procedure. This change factorizes them so that: 1. They are not duplicated. 2. They can be reused and extended easily when defining emacs packages. * guix/build/emacs-build-system.scm (%default-include, %default-exclude): New variables. (install): Use %default-include and %default-exclude as default arguments. * guix/build-system/emacs.scm: Use and re-export %default-include, %default-exclude from (guix build emacs-build-system). (emacs-build): Use %default-include and %default-exclude as default arguments. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net> Maxim Cournoyer
2017-06-03Merge branch 'master' into core-updates... Conflicts: gnu/packages/image.scm (incorporated libtiff graft) Marius Bakke
2017-05-30build-system/cmake: Add support for cross compilation....Fixes <https://bugs.gnu.org/26897>. * guix/build-system/gnu.scm: Export standard-cross-packages. * guix/build-system/cmake.scm (cmake-cross-build): New procedure. (lower): Add support for cross-builds. * guix/build/cmake-build-system.scm (configure): Handle "target" argument. Ricardo Wurmus
2017-05-28build-system: Add 'font-build-system'....* Makefile.am (MODULES): Add 'guix/build-system/font.scm' and 'guix/build/font-build-system.scm'. * guix/build-system/font.scm: New file. * guix/build/font-build-system.scm: New file. * doc/guix.texi (Build Systems): Add 'font-build-system'. Arun Isaac
2017-05-25build-system: gnu: Fix cross-gcc call....This is a follow-up to 7b3318e34f4e2743254a88b908859901db960e9a. * guix/build-system/gnu.scm (standard-cross-packages): Use keyword arguments in cross-gcc call. Ricardo Wurmus
2017-05-23build-system: emacs: Install only a subset of files....* guix/build/emacs-build-system.scm (install): Install files matching #:include while excluding files matching #:exclude. * guix/build-system/emacs.scm (emacs-build): Add keyword arguments #:include and #:exclude. Arun Isaac