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2020-09-15import: cpan: Export cpan-release-module....* guix/import/cpan.scm: Fix typo. Tobias Geerinckx-Rice
2020-09-08Remove (guix json) and require Guile-JSON 4.3.0+....This is a followup to 4071879c86d059ee087c8986915ea72b8c742b72. * guix/json.scm: Remove. * Makefile.am (MODULES): Adjust accordingly. * m4/guix.m4 (GUIX_CHECK_GUILE_JSON): Check for 'define-json-mapping'. * doc/guix.texi (Requirements): Require Guile-JSON 4.3.0+. * guix/ci.scm, guix/cve.scm, guix/import/cpan.scm, guix/import/crate.scm, guix/swh.scm: Remove (guix json) import. * guix/import/gem.scm, guix/import/pypi.scm: Likewise, and import (json). * guix/self.scm (specification->package): Switch to GUILE-JSON-4. * guix/git-download.scm (git-fetch): Likewise. Ludovic Courtès
2020-09-01import: launchpad: Recognize more URLs....* guix/import/launchpad.scm (updated-launchpad-url): Recognize more URLs. Arun Isaac
2020-09-01import: launchpad: Recognize the .orig.tar.gz extension....* guix/import/launchpad.scm (find-extension): Recognize the .orig.tar.gz extension. Arun Isaac
2020-09-01import: launchpad: Handle list of source URLs correctly....* guix/import/launchpad.scm (updated-launchpad-url): Return updated URL when package has a list of URLs, not the old URL. Arun Isaac
2020-07-25utils: Remove compatibility re-export of 'memoize'....The 'memoize' binding was re-exported in 2016, commit 19e1d5f7f90194f1ac7e783b28a688ce1441786d, as a backwards-compatibility measure that makes little sense now. * guix/utils.scm: Don't re-export 'memoize'. * guix/import/pypi.scm: Adjust imports. * tests/pypi.scm: Remove duplicate (guix memoization) import. Ludovic Courtès
2020-07-24import: github: Gracefully handle projects that have disappeared....Fixes <https://bugs.gnu.org/42509>. Reported by Alexandru-Sergiu Marton <brown121407@posteo.ro>. * guix/import/github.scm (fetch-releases-or-tags): Use 'http-fetch' instead of 'json-fetch', and guard against 404 errors. Upon 404, emit a warning and return the empty vector. Ludovic Courtès
2020-07-05import: pypi: Handle 'null instead of #nil....* guix/import/pypi.scm (non-empty-string-or-false): guile-json now returns 'null instead of #nil for null JSON values. Handle it. Arun Isaac
2020-07-03import: Do not assume that 'package-source' returns an origin....* guix/gnu-maintenance.scm (gnu-package?): Check whether 'package-source' returns an origin. * guix/import/github.scm (updated-github-url): Likewise. * guix/import/launchpad.scm (updated-launchpad-url): Likewise. Ludovic Courtès
2020-07-03upstream: Define 'url-predicate' and use it....* guix/upstream.scm (url-predicate): New procedure. (url-prefix-predicate): Define in terms of 'url-predicate'. * guix/import/cpan.scm (cpan-package?): Use 'url-predicate'. * guix/import/cran.scm (cran-package?) (bioconductor-package?) (bioconductor-data-package?) (bioconductor-experiment-package?): Likewise. * guix/import/crate.scm (crate-package?): Likewise. * guix/import/elpa.scm (package-from-gnu.org?): Likewise. * guix/import/hackage.scm (hackage-package?): Likewise. * guix/import/pypi.scm (pypi-package?): Likewise. * guix/import/gem.scm (gem-package?): Use 'url-prefix-predicate'. Ludovic Courtès
2020-06-13guix: Update to Bioconductor 3.11....* guix/build-system/r.scm (bioconductor-uri): Use new URL. * guix/import/cran.scm (%bioconductor-version): Update to 3.11. Ricardo Wurmus
2020-06-09import: stackage: Fix typo....* guix/import/stackage.scm (latest-lts-release): Fix spelling of ‘if’. Tobias Geerinckx-Rice
2020-06-09import: stackage: Fix typo....* guix/import/stackage.scm (latest-lts-release): Fix spelling of "included". Marius Bakke
2020-05-25git: 'update-cached-checkout' returns the commit relation....* guix/git.scm (update-cached-checkout): Add #:starting-commit parameter. Call 'commit-relation' when #:starting-commit is true. Always return the relation or #f as the third value. (latest-repository-commit): Adjust accordingly. * guix/import/opam.scm (get-opam-repository): Likewise. * tests/channels.scm ("latest-channel-instances includes channel dependencies") ("latest-channel-instances excludes duplicate channel dependencies"): Update mock of 'update-cached-checkout' accordingly. Ludovic Courtès
2020-05-22packages: Introduce <content-hash> and use it in <origin>....* guix/packages.scm (<content-hash>): New record type. (define-content-hash-constructor, build-content-hash) (content-hash): New macros. (print-content-hash): New procedure. (<origin>): Rename constructor to '%origin'. [sha256]: Remove field. [hash]: New field. Adjust users. (origin-compatibility-helper, origin): New macros. (origin-sha256): New deprecated procedure. (origin->derivation): Adjust accordingly. * tests/packages.scm ("package-source-derivation, origin, sha512"): New test. * guix/tests.scm: Hide (gcrypt hash) 'sha256' for proper syntax matching. * tests/challenge.scm: Add #:prefix for (gcrypt hash) and adjust users. * tests/derivations.scm: Likewise. * tests/store.scm: Likewise. * tests/graph.scm ("bag DAG, including origins"): Provide 'sha256' field with the right length. * gnu/packages/aspell.scm (aspell-dictionary) (aspell-dict-ca, aspell-dict-it): Use 'hash' and 'content-hash' for proper syntax matching. * gnu/packages/bash.scm (bash-patch): Rename 'sha256' to 'sha256-bv'. * gnu/packages/bootstrap.scm (bootstrap-executable): Rename 'sha256' to 'bv'. * gnu/packages/readline.scm (readline-patch): Likewise. * gnu/packages/virtualization.scm (qemu-patch): Rename 'sha256' to 'sha256-bv'. * guix/import/utils.scm: Hide (gcrypt hash) 'sha256'. Ludovic Courtès
2020-05-13guix: cran: Add missing default R package....* guix/import/cran.scm (default-r-packages): Add "datasets" to the list of default R packages. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> pimi
2020-05-13mailmap: Update entries for Nikita....* .mailmap: change email and name for Nikita. * Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish, gnu/packages/accessibility.scm, gnu/packages/admin.scm, gnu/packages/audio.scm, gnu/packages/autotools.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/cinnamon.scm, gnu/packages/compression.scm, gnu/packages/crypto.scm, gnu/packages/databases.scm, gnu/packages/django.scm, gnu/packages/dns.scm, gnu/packages/elixir.scm, gnu/packages/emacs-xyz.scm, gnu/packages/emacs.scm, gnu/packages/enlightenment.scm, gnu/packages/erlang.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/forth.scm, gnu/packages/fvwm.scm, gnu/packages/games.scm, gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm, gnu/packages/gtk.scm, gnu/packages/guile-wm.scm, gnu/packages/guile-xyz.scm, gnu/packages/haskell-apps.scm, gnu/packages/haskell-check.scm, gnu/packages/haskell-crypto.scm, gnu/packages/haskell-xyz.scm, gnu/packages/haskell.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/language.scm, gnu/packages/libcanberra.scm, gnu/packages/linux.scm, gnu/packages/lisp-xyz.scm, gnu/packages/lisp.scm, gnu/packages/lolcode.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/mate.scm, gnu/packages/maths.scm, gnu/packages/mc.scm, gnu/packages/messaging.scm, gnu/packages/music.scm, gnu/packages/ncurses.scm, gnu/packages/networking.scm, gnu/packages/nickle.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm, gnu/packages/perl-check.scm, gnu/packages/perl.scm, gnu/packages/python-compression.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python-xyz.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/ssh.scm, gnu/packages/suckless.scm, gnu/packages/tbb.scm, gnu/packages/telephony.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/web.scm, gnu/packages/wm.scm, gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/services/certbot.scm, gnu/services/desktop.scm, gnu/services/version-control.scm, gnu/services/web.scm, guix/import/hackage.scm, guix/licenses.scm: Likewise. Signed-off-by: Efraim Flashner <efraim@flashner.co.il> nikita
2020-04-27import: crate: Gracefully handle non-existent crates....Fixes <https://bugs.gnu.org/40891>. Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>. * guix/import/crate.scm (crate->guix-package): Wrap value of 'version-number' and 'version*' in (and crate ...). Ludovic Courtès
2020-04-16import/print: Don't factorize URI if there's no version match....* guix/import/print.scm (package->code): If FACTORIZE-URI returns just the unmodified string use that as the URI. Ricardo Wurmus
2020-04-16import/utils: alist->package: Include arguments....* guix/import/utils.scm (alist->package): Process arguments field in input data and include it in the generated package. Ricardo Wurmus
2020-04-16import/json: json->code: Handle files with more than one definition....* guix/import/json.scm (json->code): Convert JSON arrays to lists of package definitions. (json->scheme-file): Write all expressions to the target file. Ricardo Wurmus
2020-04-16import/utils: alist->package: Ignore known inputs....* guix/import/utils.scm (alist->package): Accept optional list of known inputs, which are excluded from the specification lookup. * guix/import/print.scm (package->code)[package-lists->code]: Handle inputs which are just symbols. Ricardo Wurmus
2020-04-16import/print: package->code: Wrap S-expression in definition....* guix/import/print.scm (package->code): Return a definition, not just a package expression. Ricardo Wurmus
2020-04-16import/json: Use json->code....* guix/import/json.scm (json->code): Export procedure. * guix/scripts/import/json.scm (guix-import-json): Use json->code. Ricardo Wurmus
2020-04-16import/json: Add json->scheme-file....* guix/import/json.scm (json->code, json->scheme-file): New procedures. Ricardo Wurmus
2020-04-16import/print: package->code: Wrap build system value in module reference....* guix/import/print.scm (package->code): Return build system value with corresponding module. Ricardo Wurmus
2020-04-16import/print: Return license with prefix....* guix/import/print.scm (license->code): Prepend license: prefix. Ricardo Wurmus
2020-03-25import/cran: Import missing module....This is a follow-up to commit b005c240bb5e436ffe9d55c2dd75c9af85aa0fdd. Reported-by: Ludovic Courtès <ludo@gnu.org> * guix/import/cran.scm: Import (guix ui) module. Ricardo Wurmus
2020-03-25import/cran: Support importing from Mercurial repositories....* guix/import/cran.scm (download): Accept keyword #:method; add case for hg method. (fetch-description): Handle hg repository. (description->package): Add cases for hg repositories and update call of DOWNLOAD procedure. (cran->guix-package): Retry importing from Bioconductor when hg import failed. Ricardo Wurmus
2020-03-24import: crate: Deduplicate dependencies....* guix/import/crate.scm (crate-version-dependencies): Deduplicate crate dependencies. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Martin Becze
2020-03-17guix: import: opam: Use a default repository....* guix/import/opam.scm (opam->guix-package): Use a default value for `repository`. Julien Lepiller
2020-03-12import: cpan: Gracefully handle missing projects....* guix/import/cpan.scm (cpan-fetch): Check whether 'json-fetch' returns #f. Ludovic Courtès
2020-03-12import: utils: Remove 'assoc-ref*'....* guix/import/utils.scm (assoc-ref*): Remove. Ludovic Courtès
2020-03-12import: pypi: Rewrite to use 'define-json-mapping'....* guix/import/pypi.scm (non-empty-string-or-false): New procedure. (<pypi-project>, <project-info>, <distribution>): New record types. (pypi-fetch): Call 'json->pypi-project'. (latest-source-release, latest-wheel-release): Use the new record accessors instead of 'assoc-ref*'. (pypi->guix-package, latest-release): Likewise. * tests/pypi.scm (test-json): Add mandatory fields. Ludovic Courtès
2020-03-07import/cran: Add vignette builder to native inputs....* guix/import/cran.scm (needs-knitr?): New procedure. (description->package): Use it. Ricardo Wurmus
2020-03-04import: pypi: Add more licenses...* guix/import/pypi.scm (string->license): Add the BSD 2-clause and MPL 2.0 licenses, and add more strings for BSD 3-clause and Expat license. Signed-off-by: Leo Famulari <leo@famulari.name> Lars-Dominik Braun
2020-02-22import: github: Use HTTP "Authorization" header for access tokens....Fixes <https://bugs.gnu.org/39511>. The "access_token" query parameter is now deprecated: https://developer.github.com/changes/2019-11-05-deprecated-passwords-and-authorizations-api/#authenticating-using-query-parameters * guix/import/github.scm (fetch-releases-or-tags)[headers]: Add "Authorization" header when (%github-token) is true. [decorate]: Remove, and remove callers. Matt Wette
2020-02-05import: pypi: Support exporting packages with .zip source....* guix/import/pypi.scm (make-pypi-sexp): Rename test-inputs to native-inputs. Restructure the way pypi-uri parameters are generated. Use pypi-uri's extension parameter when required. Add "unzip" to native inputs when the package source is a zip file. Signed-off-by: Marius Bakke <mbakke@fastmail.com> Jakub Kądziołka
2020-02-05import: gem: Deal with unavailable licensing info....Fixes <https://bugs.gnu.org/39404>. Reported by Seth <lee.seth@tuta.io>. * guix/import/gem.scm (<gem>)[licenses]: Adjust for non-vector licenses. * tests/gem.scm (test-bar-json): Change "licenses" to 'null'. ("gem-recursive-import"): Adjust accordingly. Ludovic Courtès
2020-02-05import: gem: Rewrite to use a JSON mapping to records....* guix/import/gem.scm (<gem>, <gem-dependencies>, <gem-dependency>): New record types with JSON mapping. (json->gem-dependencies): New procedures. (rubygems-fetch): Use it. (hex-string->bytevector): Remove. (make-gem-sexp): Expect HASH to be a bytevector. (gem->guix-package): Adjust to use the new <gem> data type instead of an alist. (latest-release): Likewise. Ludovic Courtès
2020-01-17import: texlive: Avoid uses of '@@' in tests....* guix/import/texlive.scm (fetch-sxml, sxml->package): Export. * tests/texlive.scm <top level>: Call '%http-server-port'. ("fetch-sxml: returns SXML for valid XML"): Use 'with-http-server' and set 'current-http-proxy' instead of using 'mock'. ("sxml->package"): Remove use of '@@'. Ludovic Courtès
2020-01-17import: opam: Avoid uses of '@@' in tests....* guix/import/opam.scm (string-pat, multiline-string, list-pat) (dict, condition): Export. (opam-fetch): Add optional 'repository' parameter. (opam->guix-package): Add #:repository parameter and pass it to 'opam-fetch'. * tests/opam.scm ("opam->guix-package"): Remove use of 'mock' and pass TEST-REPO to 'opam->guix-package' instead. ("parse-strings", "parse-multiline-strings") ("parse-lists", "parse-dicts", "parse-conditions"): Remove uses of '@@', which are no longer needed. Ludovic Courtès
2020-01-16import: elpa: Rewrite test to use an HTTP server instead of mocking....* guix/import/elpa.scm (elpa-url): Add 'gnu/http'. (elpa->guix-package): Handle it. * tests/elpa.scm (elpa-package-info-mock, auctex-readme-mock) (elpa-version->string, package-source-url, ensure-list) (package-home-page, make-elpa-package): Remove. <top level>: Call '%http-server-port'. (eval-test-with-elpa): Remove uses of 'mock'. Use 'with-http-server' and parameterize 'current-http-proxy' instead. Ludovic Courtès
2020-01-16import: cran: Avoid uses of '@@' in the tests....* guix/import/cran.scm (description->alist, description->package): Export. <top level>: Set! 'listify'. * tests/cran.scm (description-alist, "description->package"): Remove use of '@@' to access the relevant bindings. Ludovic Courtès
2020-01-16import: crate: Export 'string->license'....* guix/import/crate.scm (string->license): Export. * tests/crate.scm (string->license): Remove. Ludovic Courtès
2020-01-15import: cpan: Rewrite tests to use an HTTP server instead of mocking....* guix/import/cpan.scm (%metacpan-base-url): New variable. (module->dist-name, cpan-fetch): Refer to it instead of the hard-coded URL. * tests/cpan.scm ("cpan->guix-package"): Use 'with-http-server' instead of 'mock'. Ludovic Courtès
2020-01-15import: cpan: Rewrite to use 'define-json-mapping'....* guix/import/cpan.scm (<cpan-dependency>, <cpan-release>): New JSON-mapped record types. (metacpan-url->mirror-url): New procedure. (cpan-source-url): Rewrite in terms of it. (cpan-version): Remove. (cpan-module->sexp): Rewrite to take a <cpan-release> instead of an alist, and rename 'meta' to 'release'. [convert-inputs]: Rewrite to use 'cpan-release-dependencies'. Update calls to 'convert-inputs' to pass a list of symbols. Replace 'assoc-ref' calls with the appropriate field accessors. (cpan->guix-package): Rename 'module-meta' to 'release'. (latest-release): Likewise, and use the appropriate accessors. * tests/cpan.scm (test-json): Remove "prereqs" record; add "dependency" list. ("source-url-http", "source-url-https"): Remove. ("metacpan-url->mirror-url, http") ("metacpan-url->mirror-url, https"): New tests. Ludovic Courtès
2020-01-03import: cran: Fix file descriptor leak....Fixes <https://bugs.gnu.org/38836>. Reported by Ricardo Wurmus <rekado@elephly.net>. * guix/import/cran.scm (bioconductor-packages-list): Close the port returned by 'http-fetch/cached'. (fetch-description): Likewise. Ludovic Courtès
2019-12-30import: crate: Honor crate version for recursive imports....Fixes <https://bugs.gnu.org/38709>. Reported by Valentin Ignatev <valentignatev@gmail.com>. * guix/import/crate.scm (crate-recursive-import): Add optional 'version' parameter and honor it. * guix/scripts/import/crate.scm (guix-import-crate): Pass VERSION as 2nd argument to 'crate-recursive-import'. Ludovic Courtès
2019-12-15guix: Upgrade to Bioconductor 3.10....* guix/build-system/r.scm (bioconductor-uri): Switch to version 3.10. * guix/import/cran.scm (%bioconductor-version): Same. Ricardo Wurmus