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2021-05-09Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/bioinformatics.scm gnu/packages/django.scm gnu/packages/gtk.scm gnu/packages/llvm.scm gnu/packages/python-web.scm gnu/packages/python.scm gnu/packages/tex.scm guix/build-system/asdf.scm guix/build/emacs-build-system.scm guix/profiles.scm Marius Bakke
2021-05-05profiles: texlive-configuration: Handle updmap.cfg conflict....The profile hook would fail when preparing an environment for a package using texlive-union, because the union already had a updmap.cfg file. Reported-by: Lars-Dominik Braun <ldb@leibniz-psychology.org>. * guix/profiles.scm (texlive-configuration): Delete updmap.cfg if it exists. Ricardo Wurmus
2021-05-03profiles: texlive-configuration: Refresh font maps....* guix/profiles.scm (texlive-configuration): Run updmap to generate font maps necessary for pdflatex and other tools. Ricardo Wurmus
2021-05-01profiles: Add hook for Emacs subdirs....* guix/profiles.scm (emacs-subdirs): New variable. (%default-profile-hooks): Add it here. * guix/status.scm (hook-message): Add a message for emacs-subdirs. Leo Prikler
2021-03-06Merge branch 'master' into core-updatesChristopher Baines
2021-03-05profiles: 'package->manifest-entry' preserves transformations by default....Previously, transformations applied from a manifest (rather than via "guix install") would be lost. This change fixes that and simplifies things. Reported by zimoun at <https://lists.gnu.org/archive/html/guix-devel/2021-02/msg00153.html>. * guix/profiles.scm (default-properties): New procedure. (package->manifest-entry): Use it for #:properties. * guix/scripts/pack.scm (guix-pack)[with-transformations]: Remove. Remove caller. * guix/scripts/package.scm (transaction-upgrade-entry): Remove calls to 'manifest-entry-with-transformations'. * tests/guix-package.sh: Add test. * tests/transformations.scm ("options->transformation + package->manifest-entry"): New test. Ludovic Courtès
2021-02-03Merge branch 'master' into core-updatesChristopher Baines
2021-02-01profiles: Add 'manifest->code'....* guix/profiles.scm (manifest->code): New procedure. * tests/profiles.scm ("manifest->code, simple") ("manifest->code, simple, versions") ("manifest->code, transformations"): New tests. Ludovic Courtès
2021-01-29gnu: texlive-bin: Enable the use of multiple TeX Live trees....Attempting to compose multiple TeX Live trees (such as can happen when using a texlive-union generated package) proved problematic; only the texmf.cnf configuration file from the union would be honored, causing other TeX Live components to be ignored. This change does away with TeX Live unions, instead relying on the default texmf.cnf configuration file provided by the texlive-bin package to honor individual TeX Live trees referred to via the newly introduced GUIX_TEXMF variable, and replacing the texlive-union procedure by texlive-updmap.cfg, to explicit that generating the fonts map configuration is now its sole purpose. * gnu/packages/tex.scm (texlive-bin)[phases]{customize-texmf}: New phase. {postint}: Move the patching of the texmf.cnf file to the new above phase. Patch the updmap.pl script to find its Perl modules. [native-search-paths]: Rename the TEXMF variable to GUIX_TEXMF. Remove the TEXMFCNF variable. * guix/profiles.scm (texlive-configuration): Remove procedure. (%default-profile-hooks)[texlive-configuration]: Unregister hook. (texlive-union): Alias to what has moved to... (texlivke-updmap.cfg): ... here. Update doc. Do not provide a different texmf.cnf configuration. [inherit]: Do not inherit from texlive-base. [build-system]: Switch to the copy-build-system. [arguments]{install-plan}: New argument. [phases]{regenerate-updmap.cfg}: New phase, which keeps only the fonts map generating code from the previous builder code. [inputs]: Remove bash, and move to ... [propagated-inputs]: ... here. [native-inputs]: Remove field, and move the source of the base updmap.cfg file to... [source]: ... here. [synopsis]: Update. [description]: Likewise. [license]: Delete duplicates. Maxim Cournoyer
2020-12-07profiles: Delete duplicate manifest entries in packages->manifest....* gnu/profiles.scm (packages->manifest): Delete duplicate entries. * tests/profiles.scm ("packages->manifest, no duplicates"): New test. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Leo Prikler
2020-12-07profiles: Remove duplicates in manifest transactions....Fixes <https://bugs.gnu.org/23874>. Reported by Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>. * guix/profiles.scm (manifest-transaction-effects): Delete duplicates in install and remove. Let multiple upgrades and downgrades shadow previous transactions of the same kind. * tests/profiles.scm ("manifest-transaction-effects no double install or upgrades") ("manifest-transaction-effects no double downgrade") ("manifest-transaction-effects no double removal"): New tests. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Leo Prikler
2020-11-02profiles: Add fast path for 'xdg-mime-database' hook....Partly fixes <https://bugs.gnu.org/44053>. Reported by Joshua Branson <jbranso@dismail.de> and Maxim Cournoyer <maxim.cournoyer@gmail.com>. * guix/profiles.scm (xdg-mime-database): When PKGDIRS contains only one element, symlink directly to it. Invoke 'update-mime-database' only when PKGDIRS contains two or more elements, which is less frequent. Ludovic Courtès
2020-08-25linux-libre: Support module compression....This commit adds support for GZIP compression for linux-libre kernel modules. The initrd modules are kept uncompressed as the initrd is already compressed as a whole. The linux-libre kernel also supports XZ compression, but as Guix does not have any available bindings for now, and the compression time is far more significant, GZIP seems to be a better option. * gnu/build/linux-modules.scm (modinfo-section-contents): Use 'call-with-gzip-input-port' to read from a module file using '.gz' extension, (strip-extension): new procedure, (dot-ko): adapt to support compression, (ensure-dot-ko): ditto, (file-name->module-name): ditto, (find-module-file): ditto, (load-linux-module*): ditto, (module-name->file-name/guess): ditto, (module-name-lookup): ditto, (write-module-name-database): ditto, (write-module-alias-database): ditto, (write-module-device-database): ditto. * gnu/installer.scm (installer-program): Add "guile-zlib" to the extensions. * gnu/machine/ssh.scm (machine-check-initrd-modules): Ditto. * gnu/services.scm (activation-script): Ditto. * gnu/services/base.scm (default-serial-port): Ditto, (agetty-shepherd-service): ditto, (udev-service-type): ditto. * gnu/system/image.scm (gcrypt-sqlite3&co): Ditto. * gnu/system/linux-initrd.scm (flat-linux-module-directory): Add "guile-zlib" to the extensions and make sure that the initrd only contains uncompressed module files. * gnu/system/shadow.scm (account-shepherd-service): Add "guile-zlib" to the extensions. * guix/profiles.scm (linux-module-database): Ditto. Mathieu Othacehe
2020-08-24Use "guile-zlib" and "guile-lzlib" instead of (guix config)....* Makefile.am (MODULES): Remove guix/zlib.scm and guix/lzlib.scm, (SCM_TESTS): remove tests/zlib.scm, tests/lzlib.scm. * build-aux/build-self.scm (make-config.scm): Remove unused %libz variable. * configure.ac: Remove LIBZ and LIBLZ variables and check instead for Guile-zlib and Guile-lzlib. * doc/guix.texi ("Requirements"): Remove zlib requirement and add Guile-zlib and Guile-lzlib instead. * gnu/packages/package-management.scm (guix)[native-inputs]: Add "guile-zlib" and "guile-lzlib", [inputs]: remove "zlib" and "lzlib", [propagated-inputs]: ditto, [arguments]: add "guile-zlib" and "guile-lzlib" to Guile load path. * guix/config.scm.in (%libz, %liblz): Remove them. * guix/lzlib.scm: Remove it. * guix/man-db.scm: Use (zlib) instead of (guix zlib). * guix/profiles.scm (manual-database): Do not stub (guix config) in imported modules list, instead add "guile-zlib" to the extension list. * guix/scripts/publish.scm: Use (zlib) instead of (guix zlib) and (lzlib) instead of (guix lzlib), (string->compression-type, effective-compression): do not check for zlib and lzlib availability. * guix/scripts/substitute.scm (%compression-methods): Do not check for lzlib availability. * guix/self.scm (specification->package): Add "guile-zlib" and "guile-lzlib" and remove "zlib" and "lzlib", (compiled-guix): remove "zlib" and "lzlib" arguments and add guile-zlib and guile-lzlib to the dependencies, also do not pass "zlib" and "lzlib" to "make-config.scm" procedure, (make-config.scm): remove "zlib" and "lzlib" arguments as well as %libz and %liblz variables. * guix/utils.scm (lzip-port): Use (lzlib) instead of (guix lzlib) and do not check for lzlib availability. * guix/zlib.scm: Remove it. * m4/guix.m4 (GUIX_LIBZ_LIBDIR, GUIX_LIBLZ_FILE_NAME): Remove them. * tests/lzlib.scm: Use (zlib) instead of (guix zlib) and (lzlib) instead of (guix lzlib), and do not check for zlib and lzlib availability. * tests/publish.scm: Ditto. * tests/substitute.scm: Do not check for lzlib availability. * tests/utils.scm: Ditto. * tests/zlib.scm: Remove it. Mathieu Othacehe
2020-07-25utils: Move '&fix-hint' to (guix diagnostics)....* guix/utils.scm (&fix-hint): Move to... * guix/diagnostics.scm (&fix-hint): ... here. * gnu.scm: Adjust imports accordingly. * gnu/system/mapped-devices.scm: Likewise. * guix/channels.scm: Likewise. * guix/profiles.scm: Likewise. * guix/scripts/system/reconfigure.scm: Likewise. * guix/ssh.scm: Likewise. Ludovic Courtès
2020-06-18profiles: 'linux-module-database' hooks gracefully handles module-less kernels....Fixes <https://bugs.gnu.org/41924>. * guix/profiles.scm (linux-module-database)[build]: Arrange so 'directory-entries' always returns a list. Add 'match' clause for the empty list. Co-authored-by: Ivan Kozlov <kanichos@yandex.ru> Ludovic Courtès
2020-06-18profiles: Reindent 'linux-module-database'....* guix/profiles.scm (linux-module-database): Reindent. Ludovic Courtès
2020-06-14lint: Add 'check-for-collisions' checker....Suggested by Edouard Klein <edk@beaver-labs.com>. * guix/profiles.scm (check-for-collisions): Export. * guix/lint.scm (check-profile-collisions): New procedure. (%local-checkers): Add 'profile-collisions' checker. * tests/lint.scm ("profile-collisions: no warnings") ("profile-collisions: propagated inputs collide") ("profile-collisions: propagated inputs collide, store items"): New tests. * doc/guix.texi (Invoking guix lint): Document it. Ludovic Courtès
2020-06-14profiles: Fix pathological performance of 'manifest-transitive-entries'....For packages with lots of propagated inputs, 'manifest-transitive-entries', as called from 'check-for-collisions', would exhibit pathological behavior. For example, "guix install cl-ana" wouldn't complete in 1mn; now, it's down to 20s. The issue was that manifest entries would never be 'equal?' due to the delayed field in <manifest-entry>. * guix/profiles.scm (manifest-transitive-entries): Use a vhash instead of a set. Use 'manifest-entry=?' instead of 'equal?' when checking for equality. Ludovic Courtès
2020-05-02Merge branch 'master' into core-updatesMarius Bakke
2020-05-01profiles: Mark manual database as non-substitutable....Fixes <https://bugs.gnu.org/40381>. Reported by pkill9 <pkill9@runbox.com>. * guix/profiles.scm (manual-database): Pass #:substitutable? #f. Ludovic Courtès
2020-04-30Merge branch 'master' into core-updates... Conflicts: gnu/local.mk gnu/packages/backup.scm gnu/packages/emacs-xyz.scm gnu/packages/guile.scm gnu/packages/lisp.scm gnu/packages/openldap.scm gnu/packages/package-management.scm gnu/packages/web.scm gnu/packages/xorg.scm Marius Bakke
2020-04-26profiles: Add lowerable <profile> record type....* guix/profiles.scm (<profile>): New record type. * tests/profiles.scm ("<profile>"): New test. Ludovic Courtès
2020-04-23Merge branch 'master' into core-updates... Conflicts: etc/news.scm gnu/local.mk gnu/packages/bootloaders.scm gnu/packages/linphone.scm gnu/packages/linux.scm gnu/packages/tls.scm gnu/system.scm Marius Bakke
2020-04-22profiles: Add #:name parameter to 'profile-derivation'....* guix/profiles.scm (profile-derivation): Add #:name and pass it to 'gexp->derivation'. Ludovic Courtès
2020-04-08Merge branch 'master' into core-updates... Conflicts: etc/news.scm gnu/local.mk gnu/packages/check.scm gnu/packages/cross-base.scm gnu/packages/gimp.scm gnu/packages/java.scm gnu/packages/mail.scm gnu/packages/sdl.scm gnu/packages/texinfo.scm gnu/packages/tls.scm gnu/packages/version-control.scm Marius Bakke
2020-03-31profiles: Compute manual database entries in parallel....This provides a 36% speedup on an SSD and 4 cores for the 1.5K man pages in the manual database derivation of: guix environment --ad-hoc jupyter python-ipython python-ipykernel * guix/profiles.scm (manual-database)[build]: Add 'print-string', 'print', and 'compute-entry'. Change 'compute-entries' to call 'compute-entry' in 'n-par-map'. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Arne Babenhauserheide
2020-03-31guix package: Do not misdiagnose upgrades when there are propagated inputs....Fixes <https://bugs.gnu.org/35872>. Reported by Andy Tai <atai@atai.org>. * guix/profiles.scm (list=?, manifest-entry=?): New procedures. * guix/scripts/package.scm (transaction-upgrade-entry): In the '=' case, use 'manifest-entry=?' to determine whether it's an upgrade. * tests/packages.scm ("transaction-upgrade-entry, zero upgrades, propagated inputs"): New test. Ludovic Courtès
2020-03-31profiles: 'lower-manifest-entry' recurses on dependencies....* guix/profiles.scm (lower-manifest-entry)[recurse]: New procedure. Call it on dependencies and set the 'dependencies' field accordingly. Ludovic Courtès
2020-03-31guix package: 'transaction-upgrade-entry' uses 'lower-manifest-entry'....* guix/profiles.scm (lower-manifest-entry): Export. * guix/scripts/package.scm (transaction-upgrade-entry)[lower-manifest-entry*] [upgrade]: New procedures. Use 'lower-manifest-entry*' instead of 'package-derivation' to compute the output file name of PKG. Ludovic Courtès
2020-03-30Merge branch 'master' into core-updates... Conflicts: gnu/packages/admin.scm gnu/packages/commencement.scm gnu/packages/guile.scm gnu/packages/linux.scm gnu/packages/package-management.scm gnu/packages/pulseaudio.scm gnu/packages/web.scm Marius Bakke
2020-03-29profiles: Use 'mapm/accumulate-builds'....* guix/profiles.scm (check-for-collisions): Use 'mapm/accumulate-builds' to lower manifest entries. Call 'foldm' over the already-lowered entries. (profile-derivation): Use 'mapm/accumulate-builds' instead of 'mapm' when calling HOOKS. Ludovic Courtès
2020-03-27Merge branch 'master' into core-updates... Conflicts: gnu/packages/icu4c.scm gnu/packages/man.scm gnu/packages/python-xyz.scm guix/scripts/environment.scm guix/scripts/pack.scm guix/scripts/package.scm guix/scripts/pull.scm guix/store.scm Marius Bakke
2020-03-26profiles: 'profile-derivation' sets a 'type' property....* guix/profiles.scm (profile-derivation): Pass #:properties to 'gexp->derivation'. Ludovic Courtès
2020-03-22system: Add kernel-loadable-modules to operating-system....* gnu/system.scm (<operating-system>): Add kernel-loadable-modules. (operating-system-directory-base-entries): Use it. * doc/guix.texi (operating-system Reference): Document KERNEL-LOADABLE-MODULES. * gnu/build/linux-modules.scm (depmod): New procedure. (make-linux-module-directory): New procedure. Export it. * guix/profiles.scm (linux-module-database): New procedure. Export it. * gnu/tests/linux-modules.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/linux.scm (make-linux-libre*)[arguments]<#:phases>[install]: Disable depmod. Remove "build" and "source" symlinks. [native-inputs]: Remove kmod. Danny Milosavljevic
2020-03-17profiles: 'profile-derivation' uses _IOLBF on Guile 2.0 only....* guix/profiles.scm (profile-derivation)[builder]: Use _IOLBF on Guile 2.0 only. Ludovic Courtès
2019-12-31Merge remote-tracking branch 'master' into core-updates.Mathieu Othacehe
2019-12-29profiles: Fix profile-derivation cross-compilation....* guix/store.scm (current-target-system): New exported monadic procedure. * guix/profiles.scm (profile-derivation): Set target at bind time using the above procedure. Mathieu Othacehe
2019-12-29profiles: Add 'map-manifest-entries'....* guix/scripts/pack.scm (map-manifest-entries): Move to... * guix/profiles.scm (map-manifest-entries): ... here. Ludovic Courtès
2019-12-26profiles: Fix profile-derivation cross-compilation....* guix/store.scm (current-target-system): New exported monadic procedure. * guix/profiles.scm (profile-derivation): Set target at bind time using the above procedure. Mathieu Othacehe
2019-12-15guix: Fix typo....This is a follow-up to e8cbebb4769328f6ad49a4b5868f9c935e7e5372. * guix/profiles.scm (gtk-im-modules): Corectly refer to gtk+-2 package. Efraim Flashner
2019-12-14gnu: gtk+-2: Split binaries....* gnu/packages/gtk.scm (gtk+-2): Add "bin" output. * guix/profiles.scm (gtk-im-modules): Use "bin" output for generating gtk+-2 immodules cache file. Julien Lepiller
2019-12-10profiles: Use 'getpwuid' when $USER and $LOGNAME are undefined....Reported by YOANN P <yoann_mac_donald@hotmail.com>. * guix/profiles.scm (%profile-directory): Fall back to 'getpwuid' when "USER" and "LOGNAME" are undefined. Ludovic Courtès
2019-11-22profiles: Add 'concatenate-manifests'....* guix/profiles.scm (concatenate-manifests): New procedure. * tests/profiles.scm ("concatenate-manifests"): New test. Ludovic Courtès
2019-10-16daemon: Make 'profiles/per-user' non-world-writable....Fixes <https://bugs.gnu.org/37744>. Reported at <https://www.openwall.com/lists/oss-security/2019/10/09/4>. Based on Nix commit 5a303093dcae1e5ce9212616ef18f2ca51020b0d by Eelco Dolstra <edolstra@gmail.com>. * nix/libstore/local-store.cc (LocalStore::LocalStore): Set 'perUserDir' to #o755 instead of #o1777. (LocalStore::createUser): New function. * nix/libstore/local-store.hh (LocalStore): Add it. * nix/libstore/store-api.hh (StoreAPI): Add it. * nix/nix-daemon/nix-daemon.cc (performOp): In 'wopSetOptions', add condition to handle "user-name" property and honor it. (processConnection): Add 'userId' parameter. Call 'store->createUser' when userId is not -1. * guix/profiles.scm (ensure-profile-directory): Note that this is now handled by the daemon. * guix/store.scm (current-user-name): New procedure. (set-build-options): Add #:user-name parameter and pass it to the daemon. * tests/guix-daemon.sh: Test the creation of 'profiles/per-user' when listening on a TCP socket. * tests/store.scm ("profiles/per-user exists and is not writable") ("profiles/per-user/$USER exists"): New tests. Ludovic Courtès
2019-07-03profiles: Adjust packages->manifest pattern for inferior packages....* guix/profiles.scm (packages->manifest): Add package? predicate to `(package output)' pattern to avoid incorrectly matching `(inferior-package output)', which should be handled by a later clause. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Kyle Meyer
2019-04-10profiles: Add 'generation-profile'....* guix/profiles.scm (%profile-generation-rx): New variable. (generation-profile): New procedure. Ludovic Courtès
2019-02-07profiles: Raise an error for unmatched patterns....Previously, "guix package -r something-not-installed" would silently complete. Now an error is raised. * guix/profiles.scm (&unmatched-pattern-error): New condition type. (manifest-matching-entries): Rewrite to raise an error when one of PATTERNS is not matched. * guix/ui.scm (call-with-error-handling): Handle 'unmatched-pattern-error?'. * tests/guix-package.sh: Add test. * tests/profiles.scm ("manifest-matching-entries"): Don't try to remove unmatched pattern. ("manifest-matching-entries, no match"): New test. ("manifest-transaction-effects"): Remove 'remove' field. Ludovic Courtès
2019-02-01profiles: 'manual-database' hook reports progress....* guix/profiles.scm (manual-database)[build](compute-entries): Write a progress report. Ludovic Courtès
2019-01-18guix: Add guard to texlive-configuration profile hook....It is possible to generate a profile where this hook will crash, as the texmf.cnf file does not exist to be patched by substitute*. A simple example is the profile just containing texlive-fonts-txfonts. * guix/profiles.scm (texlive-configuration): Check that the texmf.cnf file exists before trying to change it. Christopher Baines