| Age | Commit message (Expand) | Author |
|---|
| 2019-05-06 | guix: Update to Bioconductor 3.9....* guix/build-system/r.scm (bioconductor-uri): Use 3.9 archive URL.
* guix/import/cran.scm (%bioconductor-version): Update to 3.9.
| Ricardo Wurmus |
| 2019-05-02 | Merge branch 'version-1.0.0' | Ludovic Courtès |
| 2019-05-01 | build: Change default substitute server to "ci.guix.gnu.org"....* config-daemon.ac: Replace "ci.guix.info" with "ci.guix.gnu.org".
* doc/guix.texi (SUBSTITUTE-SERVER): Likewise.
* etc/substitutes/ci.guix.gnu.org.pub: New file.
* Makefile.am (dist_pkgdata_DATA): Add it.
* guix/scripts/build.scm (%default-log-urls): Update.
* guix/scripts/substitute.scm (%default-substitute-urls): Likewise.
* guix/store.scm (%default-substitute-urls): Likewise.
* guix/self.scm (miscellaneous-files): Add "ci.guix.gnu.org".
| Ludovic Courtès |
| 2019-04-30 | guix: Fix another typo in another docstring....* guix/build/clojure-utils.scm (include-list\exclude-list)<docstring>:
Fix typo.
| Tobias Geerinckx-Rice |
| 2019-04-30 | guix: Fix typo in docstring....* guix/build/syscalls.scm (device-in-use?)<docstring>: Fix typo.
| Tobias Geerinckx-Rice |
| 2019-04-29 | processes: Gracefully handle daemons without clients....Fixes <https://bugs.gnu.org/34716>.
Reported by Mark H Weaver <mhw@netris.org>.
The problem could be reproduced by running, on one hand:
sh -c 'exec -a guix-daemon sleep 777'
and on the other hand:
guix processes
If there is no process with PID 777, 'guix processes' would barf as it
stumbles upon a <daemon-session> record whose client is #f.
* guix/scripts/processes.scm (daemon-sessions)[child-process->session]:
New procedure, with lambda formerly passed to 'map'. Handle #f returns
from 'lookup-process'.
Call 'child-process->session' within 'filter-map', not just 'map'.
| Ludovic Courtès |
| 2019-04-29 | processes: 'process-open-files' ignores disappeared /proc/PID/fd entries....Previously, 'process-open-files' would throw ENOENT if an entry had
vanished after the 'scandir' call and before the 'readlink' call.
* guix/scripts/processes.scm (process-open-files): Catch ENOENT errors
from 'readlink'.
| Ludovic Courtès |
| 2019-04-29 | guix package: Add 'guix search' alias....* guix/scripts/search.scm: New file.
* Makefile.am (MODULES): Add it.
* po/guix/POTFILES.in: Add it.
* tests/guix-package-aliases.sh: Add test.
* doc/guix.texi (Invoking guix package): Document it and use it in a
couple of examples.
| Ludovic Courtès |
| 2019-04-29 | file-systems: Support the 'no-atime' flag....* guix/build/syscalls.scm (MS_NOATIME): New variable.
* gnu/build/file-systems.scm (mount-flags->bit-mask): Support it.
* doc/guix.texi (File Systems): Document it and add cross-references to
the relevant documentation.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
| rendaw |
| 2019-04-29 | guix package: Add 'install', 'remove', and 'upgrade' aliases....* guix/scripts/install.scm, guix/scripts/remove.scm,
guix/scripts/upgrade.scm, tests/guix-package-aliases.sh: New files.
* Makefile.am (MODULES, SH_TESTS): Add them.
* po/guix/POTFILES.in: Add them.
* guix/scripts/package.scm (guix-package): Split with...
(guix-package*): ... this. New procedure.
* doc/guix.texi (Invoking guix package): Document them.
(Binary Installation, Application Setup, Package Management)
(Packages with Multiple Outputs, Package Modules)
(X.509 Certificates, Installing Debugging Files): Use 'guix install' in
simple examples.
* etc/completion/bash/guix (_guix_complete): Handle "install", "remove",
and "upgrade".
| Ludovic Courtès |
| 2019-04-28 | describe: Provide a hint when origin detection fails....* guix/scripts/describe.scm (display-checkout-info): Add call to
'display-hint' in the error case.
| Ludovic Courtès |
| 2019-04-28 | Merge branch 'staging' | Ludovic Courtès |
| 2019-04-27 | self: Rebuild translated manuals....* guix/self.scm (info-manual): Run po4a and related commands to generate
translated texi files before building translated manuals.
* guix/build/po.scm: New file.
* Makefile.am (MODULES_NOT_COMPILED): Add it.
| Julien Lepiller |
| 2019-04-25 | gnu: ocaml@4.02: Remove the package, affected by a CVE, and its dependent...packages.
This fixes <https://bugs.gnu.org/27462>.
* gnu/packages/ocaml.scm (ocaml-4.02, camlp4-4.02, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit)
(ocaml4.02-camlzip, ocaml4.02-ocamlmod, ocaml4.02-zarith)
(ocaml4.02-qcheck, ocaml4.02-qtest, ocaml4.02-stringext)
(ocaml4.02-bisect, ocaml4.02-bitstring, ocaml4.02-result)
(ocaml4.02-topkg, ocaml4.02-rresult, ocaml4.02-sqlite3, ocaml4.02-csv)
(ocaml4.02-mtime, ocaml4.02-cmdliner, ocaml4.02-fmt, ocaml4.02-astring)
(ocaml4.02-alcotest, ocaml4.02-ppx-tools, ocaml4.02-react, ocaml4.02-ssl)
(ocaml4.02-lwt, ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath)
(ocaml4.02-bos, ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar)
(ocaml4.02-uutf, ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64)
(ocaml4.02-omake, ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-bin-prot, ocaml4.02-fieldslib)
(ocaml4.02-ppx-core, ocaml4.02-ppx-optcomp, ocaml4.02-ppx-driver)
(ocaml4.02-cppo, ocaml4.02-ppx-deriving, ocaml4.02-ppx-type-conv)
(ocaml4.02-ppx-inline-test, ocaml4.02-ppx-bench, ocaml4.02-ppx-compare)
(ocaml4.02-sexplib, ocaml4.02-typerep, ocaml4.02-variantslib)
(ocaml4.02-ppx-sexp-conv, ocaml4.02-ppx-variants-conv)
(ocaml4.02-ppx-here, ocaml4.02-ppx-assert, ocaml4.02-ppx-enumerate)
(ocaml4.02-ppx-let, ocaml4.02-ppx-typerep-conv, ocaml4.02-ppx-sexp-value)
(ocaml4.02-ppx-pipebang, ocaml4.02-ppx-bin-prot, ocaml4.02-ppx-fail)
(ocaml4.02-ppx-custom-printf, ocaml4.02-ppx-sexp-message)
(ocaml4.02-ppx-fields-conv, ocaml4.02-seq, ocaml4.02-re)
(ocaml4.02-ppx-expect, ocaml4.02-ppx-jane, ocaml4.02-core-kernel)
(ocaml4.02-async-kernel, ocaml4.02-async-rpc-kernel, ocaml4.02-core)
(ocaml4.02-async-unix, ocaml4.02-async-extra, ocaml4.02-async)
(ocaml4.02-ocplib-endian, ocaml4.02-easy-format, optcomp)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): Remove variables.
* guix/build-system/ocaml.scm (default-ocaml4.02)
(default-ocaml4.02-findlib, package-with-ocaml4.02)
(strip-ocaml4.02-variant): Remove variables.
| Julien Lepiller |
| 2019-04-25 | gnu, guix: Yearly ritual purging of the filesystems....* gnu/packages/android.scm (android-ext4-utils)[synopsis]: Fix ‘file
system’ spelling.
* gnu/packages/disk.scm (rmlint)[synopsis, description]: Likewise.
* gnu/packages/golang.scm (go-github-com-kr-fs)[synopsis, description]:
Likewise & edit for grammar.
* gnu/packages/ipfs.scm (gx, go-ipfs)[description]: Likewise.
* /gnu/packages/java.scm (java-commons-vfs)[synopsis]: Likewise.
* gnu/packages/linux.scm (fuseiso)[description]: Likewise.
(genext2fs)[synopsis, description]: Likewise.
* gnu/packages/package-management.scm (libostree)[description]: Likewise.
* gnu/packages/python-xyz.scm (python-requests-file)[description]:
Likewise & mark up.
* gnu/packages/rails.scm (ruby-with-advisory-lock)[description]:
Likewise.
* gnu/packages/ruby.scm (ruby-rerun)[description]: Likewise.
* guix/build/go-build-system.scm (setup-go-environment)<docstring>:
Likewise.
* guix/store/deduplication.scm (get-temp-link)<docstring>: Likewise.
| Tobias Geerinckx-Rice |
| 2019-04-25 | self: Install 'guix.zh_CN.info'....Reported by Julien Lepiller.
* guix/self.scm (info-manual): Adjust file name regexp so that it
matches *.zh_CN.texi.
| Ludovic Courtès |
| 2019-04-23 | guix system: Compute 'bootcfg' only for 'init' and 'reconfigure'....Previously, 'guix system vm' would start by computing the bootcfg
derivation, which itself depended on an incorrect OS derivation (for the
original OS instead of the one passed through
'virtualized-operating-system'.) That added overhead and would force
the user's config file to define a root file system, for example, even
though it makes no sense in the case of a VM.
* guix/scripts/system.scm (perform-action)[bootcfg]: Limit to the 'init'
and 'reconfigure' actions.
| Ludovic Courtès |
| 2019-04-23 | Merge branch 'master' into staging | Marius Bakke |
| 2019-04-22 | pull: Create profile after the store connection has been opened....Fixes <https://bugs.gnu.org/35341>.
Reported by Florian Pelz <pelzflorian@pelzflorian.de>.
Previously, we'd call 'ensure-default-profile' before the connection to
the daemon has been opened. On the first connection, the daemon ensures
that /var/guix/profiles/per-user is world-writable. Since we were
calling 'ensure-default-profile' before that,
/var/guix/profiles/per-user was typically non-writable (555 and
root-owned), and thus 'guix pull' would error out.
* guix/scripts/pull.scm (guix-pull): Call 'ensure-default-profile'
within 'with-store'.
| Ludovic Courtès |
| 2019-04-22 | pull: Add '--news'....Suggested by Tobias Geerinckx-Rice <me@tobias.gr>.
* guix/scripts/pull.scm (%options, show-help): Add '--news'.
(display-profile-news): Add #:current-is-newer? and #:concise?.
Honor them.
(build-and-install): Pass #:concise? #t.
(display-new/upgraded-packages)[concise/max-item-count]: New variable.
Add call to 'display-hint'.
(process-query): Add clause for 'display-news'.
* doc/guix.texi (Invoking guix pull): Add '--news'.
| Ludovic Courtès |
| 2019-04-19 | guix build: Accept multiple '-s' options....* guix/scripts/build.scm (%default-options): Remove 'system'.
(%options) <--system>: Keep previous occurrences of 'system in RESULT.
(options->derivations)[system]: Remove.
[systems, things-to-build]: New variables.
[compute-derivation]: New procedure.
Iterate on all of SYSTEMS to compute the derivations of THINGS-TO-BUILD.
* tests/guix-build.sh: Add test for one and multiple '-s' flags.
* doc/guix.texi (Additional Build Options): Document this behavior.
| Ludovic Courtès |
| 2019-04-18 | guile-build-system: Support building in parallel....* guix/build/guile-build-system.scm (build): Use invoke-each, instead of
for-each, to use multiple cores if available.
(invoke-each, report-build-process): New procedures.
| Christopher Baines |
| 2019-04-18 | lint: 'check-github-url' uses our own 'open-connection-for-uri'....Fixes <https://bugs.gnu.org/35053>.
Reported by Efraim Flashner <efraim@flashner.co.il>.
Previously 'check-github-url' would let Guile 2.2's (web client) module
take care of opening the connection. Consequently, it wouldn't use the
TLS priority strings that we use in (guix build download),
'open-connection-for-uri'. In particular, it would not disable TLSv1.3,
which would trigger <https://bugs.gnu.org/34102> for github.com.
* guix/scripts/lint.scm (check-github-url): Add #:timeout parameter.
[follow-redirect]: Change parameter name to 'url' and pass it to
'string->uri'. Call 'guix:open-connection-for-uri' to open the
connection and pass it to 'http-head' via #:port.
| Ludovic Courtès |
| 2019-04-17 | pull: '--url', '--commit', and '--branch' apply to the 'guix' channel....Suggested by pkill9 <pkill9@runbox.com>.
* guix/scripts/pull.scm (channel-list): Apply REF and URL to the 'guix'
channel.
* doc/guix.texi (Invoking guix pull): Adjust accordingly.
| Ludovic Courtès |
| 2019-04-17 | build: No longer substitute 'LIBGCRYPT'....This had become useless since ca719424455465fca4b872c371daf2a46de88b33.
* configure.ac (LIBGCRYPT): Remove.
* guix/config.scm.in (%libgcrypt): Remove.
| Ludovic Courtès |
| 2019-04-17 | self: Remove unused variable....This variable is unused since commit
45779fa676419de8838cb26b6c7a24678a2be1cd.
* guix/self.scm (%dependency-variables): Remove.
* build-aux/build-self.scm (%dependency-variables): Remove.
| Ludovic Courtès |
| 2019-04-17 | Merge branch 'master' into staging | Marius Bakke |
| 2019-04-16 | store: Add "add-data-to-store-cache" profiling component....* guix/store.scm (add-data-to-store): Define 'lookup' and use it instead
of 'hash-ref'.
| Ludovic Courtès |
| 2019-04-16 | derivations: Reduce 'valid-path?' RPCs in 'derivation-prerequisites-to-build'....On a profile with 280 packages, this reduces the number of
'valid-paths?' RPCs made by 'guix package -nu' from 6K to 500.
* guix/derivations.scm (derivation-prerequisites-to-build)[built?]:
Memoize 'valid-path?' calls.
| Ludovic Courtès |
| 2019-04-16 | store: Memoize 'built-in-builders' call directly in <store-connection>....The caching strategy introduced in
40cc850aebb497faed0a11d867d8fcee729023df was ineffective since we
regularly start from an empty object cache. For example, "guix build
inkscape -n" would make 241 'built-in-builders' RPCs.
* guix/store.scm (<store-connection>)[built-in-builders]: New field.
(open-connection): Adjust '%make-store-connection' call accordingly.
(port->connection): Likewise.
(built-in-builders): Rename to...
(%built-in-builders): ... this.
(built-in-builders): New procedure.
* guix/download.scm (built-in-builders*): Remove 'mcached' call.
| Ludovic Courtès |
| 2019-04-15 | guix build: Fix relative file name canonicalization for '--root'....Fixes <https://bugs.gnu.org/35271>.
Reported by rendaw <7e9wc56emjakcm@s.rendaw.me>.
* guix/scripts/build.scm (register-root): When ROOT is a relative file
name, append the basename of ROOT, not ROOT itself.
* tests/guix-build.sh: Add test.
| Ludovic Courtès |
| 2019-04-14 | ui: Highlight heading of generation lists....* guix/ui.scm (display-generation): Highlight the "Generation" heading.
| Ludovic Courtès |
| 2019-04-14 | colors: Add 'highlight'....* guix/colors.scm (%highlight-color): New variable.
(highlight): New procedure.
* guix/ui.scm (%highlight-argument)[highlight]: Remove.
(%highlight-color): Remove.
| Ludovic Courtès |
| 2019-04-12 | build-system/linux-module: Configure module like the kernel....* guix/build/linux-module-build-system.scm (configure): New procedure.
(%standard-phases): Add "configure" phase.
| Danny Milosavljevic |
| 2019-04-12 | build-system/linux-module: Support module source versioning....* guix/build-system/linux-module.scm (make-linux-module-builder)
[native-inputs]: Add linux.
[arguments]<#:phases>[install]: Install "System.map" and "Module.symvers".
* guix/build/linux-module-build-system.scm (configure): Delete procedure.
(%standard-phases): Delete "configure" phase.
| Danny Milosavljevic |
| 2019-04-11 | colors: Add 'colorize-matches'....* guix/colors.scm (colorize-matches): New procedure.
(color-rules): Rewrite in terms of 'colorize-matches'.
| Ludovic Courtès |
| 2019-04-11 | colors: Introduce a disjoint type and pre-compute ANSI escapes....* guix/colors.scm (color-table, color): Remove.
(<color>): New record type.
(print-color): New procedure.
(define-color-table, color): New macros.
(color-codes->ansi): New procedure.
(%reset): New variable.
(colorize-string): Rewrite accordingly.
(color-rules): Adjust accordingly.
* guix/status.scm (print-build-event): Adjust to new 'colorize-string'
interface.
* guix/ui.scm (%highlight-argument): Likewise.
(%warning-colors, %info-colors, %error-colors, %hint-colors)
(%highlight-colors): Remove.
(%warning-color, %info-color, %error-color, %hint-color)
(%highlight-color): New variables.
| Ludovic Courtès |
| 2019-04-11 | guix gc: '-d' does not attempt to delete non-user-owned roots....* guix/scripts/gc.scm (guix-gc)[delete-generations]: Limit to user-owned
roots, unless we're running as root.
| Ludovic Courtès |
| 2019-04-11 | Add (guix build-system linux-module)....* guix/build/linux-module-build-system.scm: New file.
* guix/build-system/linux-module.scm: New file.
* doc/guix.texi (Build Systems): Document it.
* Makefile.am (MODULES): Add them.
| Danny Milosavljevic |
| 2019-04-10 | import: opam: Use dune-build-system when possible....* guix/import/opam.scm (opam->guix-package): Detect when dune can be used.
| Julien Lepiller |
| 2019-04-10 | import: opam: Add more patterns to opam file parser....* guix/import/opam.scm: Add more patterns to peg parser.
(choice-pat choice condition-not condition-paren): New patterns.
(ground-value condition-content condition-var): Update patterns.
| Julien Lepiller |
| 2019-04-10 | scripts: GC hint suggests 'guix gc -d 1m'....* guix/scripts.scm (warn-about-disk-space): Suggest 'guix gc -d'.
| Ludovic Courtès |
| 2019-04-10 | guix gc: Add '--delete-generations'....* guix/scripts/gc.scm (show-help, %options): Add
'--delete-generations'. Change '--delete' shorthand to '-D'.
(delete-old-generations): New procedure.
(guix-gc)[delete-generations]: New procedure.
Call it when ACTION is 'collect-garbage' and OPTS contains
'delete-generations.
* doc/guix.texi (Invoking guix gc): Document it.
| Ludovic Courtès |
| 2019-04-10 | profiles: Add 'generation-profile'....* guix/profiles.scm (%profile-generation-rx): New variable.
(generation-profile): New procedure.
| Ludovic Courtès |
| 2019-04-10 | guix gc: Add '--list-roots'....* guix/scripts/gc.scm (show-help, %options): Add '--list-roots'.
(guix-gc)[list-roots]: New procedure.
Handle '--list-roots'.
* tests/guix-gc.sh: Test it.
* doc/guix.texi (Invoking guix gc): Document it.
| Ludovic Courtès |
| 2019-04-10 | Add (guix store roots)....* guix/store/roots.scm, tests/store-roots.scm: New files.
* Makefile.am (STORE_MODULES): Add guix/store/roots.scm.
(SCM_TESTS): Add tests/store-roots.scm.
| Ludovic Courtès |
| 2019-04-10 | pull: Remove duplicate '--dry-run' description....Reported by pkill9.
* guix/scripts/pull.scm (show-help): Remove duplicate '--dry-run'
description.
| Ludovic Courtès |
| 2019-04-10 | ui: Highlight diagnostic format string arguments....* guix/ui.scm (highlight-argument): New macro.
(%highlight-argument): New procedure.
(define-diagnostic): Use 'highlight-argument'.
| Ludovic Courtès |
| 2019-04-10 | ui: Colorize hints....* guix/ui.scm (%info-colors): Remove CYAN.
(%hint-colors): New variable.
(display-hint): Adjust so that the "hint:" prefix is colorized.
| Ludovic Courtès |
| 2019-04-10 | ui: Colorize diagnostics....* guix/ui.scm (define-diagnostic): Add 'colors' parameter and pass it to
'print-diagnostic-prefix'.
(warning, info, report-error): Add extra argument.
(%warning-colors, %info-colors, %error-colors): New variables.
(print-diagnostic-prefix): Add #:colors parameter and honor it.
| Ludovic Courtès |
