| Age | Commit message (Expand) | Author |
|---|
| 2019-12-15 | guix: Upgrade to Bioconductor 3.10....* guix/build-system/r.scm (bioconductor-uri): Switch to version 3.10.
* guix/import/cran.scm (%bioconductor-version): Same.
| Ricardo Wurmus |
| 2019-12-15 | base64: Do not use (rnrs)....* guix/base64.scm: Remove #:use-module clauses for (rnrs) and (srfi
srfi-13). Add other #:use-module clauses.
(fxbit-field): Define as an alias for 'bit-field.
(fx=?, fx+, mod): New aliases.
(assert): New macro.
| Ludovic Courtès |
| 2019-12-15 | challenge: Fix type mismatch when comparing to a local hash....* guix/scripts/challenge.scm (call-with-mismatches)[narinfo1]: When
LOCAL-HASH is true, call 'narinfo-hash->sha256' and use 'bytevector=?'
instead of 'string=?'.
| Ludovic Courtès |
| 2019-12-14 | import: cran: Recognize LGPL 2.1+....* guix/import/cran.scm (string->license): Add case for lgpl2.1+.
| Ricardo Wurmus |
| 2019-12-13 | import: utils: Update docstring of 'recursive-import'....This is a followup to 70a8e13277d4a44b89dd9ee2290b98105f0235f1.
* guix/import/utils.scm (recursive-import): Update docstring.
| Ludovic Courtès |
| 2019-12-13 | emacs-build-system: Ensure the core libraries appear last in the load path....Fixes bug #38568 (see: https://bugs.gnu.org/38568).
* guix/build/emacs-build-system.scm (add-source-to-load-path): Ensure the core
libraries appear last in the load path.
Reported-by: Jelle Licht <jlicht@fsfe.org>
| Maxim Cournoyer |
| 2019-12-12 | challenge: Support "--diff=diffoscope"....* guix/scripts/challenge.scm (call-with-nar): New procedure.
(narinfo-contents): Express in terms of 'call-with-nar'.
(call-with-mismatches, report-differing-files/external): New
procedures.
(%diffoscope-command): New variable.
(%options): Support "diffoscope" and a string starting with "/".
* tests/challenge.scm (call-mismatch-test): New procedure.
("differing-files"): Rewrite in terms of 'call-mismatch-test'.
("call-with-mismatches"): New test.
* doc/guix.texi (Invoking guix challenge): Document it.
| Ludovic Courtès |
| 2019-12-12 | challenge: Add "--diff"....* guix/scripts/challenge.scm (dump-port*): New variable.
(archive-contents, store-item-contents, narinfo-contents)
(differing-files, report-differing-files): New procedures.
(summarize-report): Add #:report-differences and call it.
(show-help, %options): Add "--diff".
(%default-options): Add 'difference-report' key.
(report-differing-files): Parameterize CURRENT-TERMINAL-COLUMNS and pass
#:report-differences to 'summarize-report'.
* guix/tests/http.scm (%local-url): Add optional argument.
(call-with-http-server): Fix docstring typo.
* tests/challenge.scm (query-path-size, make-narinfo): New procedures.
("differing-files"): New test.
* doc/guix.texi (Invoking guix challenge): Document "--diff".
| Ludovic Courtès |
| 2019-12-12 | progress: Add 'progress-report-port'....* guix/scripts/substitute.scm (progress-report-port): Move to...
* guix/progress.scm (progress-report-port): ... here. New procedure.
| Ludovic Courtès |
| 2019-12-12 | serialization: Remove unused procedure....* guix/serialization.scm (write-contents): Remove.
| Ludovic Courtès |
| 2019-12-12 | challenge: Report the best narinfo URI....* guix/scripts/substitute.scm (select-uri): Rename to...
(narinfo-best-uri): ... this, and make public. Update callers.
* guix/scripts/challenge.scm (summarize-report): Use 'narinfo-best-uri'
instead of (first (narinfo-uris ...)).
| Ludovic Courtès |
| 2019-12-12 | guix archive: Add '--list'....* guix/scripts/archive.scm (show-help, %options): Add '--list'.
(list-contents): New procedure.
(guix-archive): Honor the '--list' option.
* tests/guix-archive.sh: Test it.
* doc/guix.texi (Invoking guix archive): Document it.
| Ludovic Courtès |
| 2019-12-12 | serialization: Add 'fold-archive'....* guix/serialization.scm (read-contents): Remove.
(read-file-type, fold-archive): New procedures.
(restore-file): Rewrite in terms of 'fold-archive'.
* tests/nar.scm ("write-file-tree + fold-archive")
("write-file-tree + fold-archive, flat file"): New tests.
| Ludovic Courtès |
| 2019-12-11 | import: crate: Better handle license expressions....* guix/import/crate.scm (%dual-license-rx): Removed function.
(crate->guix-package): Handle most of the multi-licensing cases.
* tests/crate.scm (licenses): Add tests for some licenses.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
| Brice Waegeneire |
| 2019-12-11 | import: utils: 'recursive-import' returns a list rather than a stream....* guix/import/utils.scm (recursive-import): Remove 'list->stream' call.
* guix/scripts/import/cran.scm (guix-import-cran): Remove 'stream->list'
call.
* guix/scripts/import/crate.scm (guix-import-crate): Likewise.
* guix/scripts/import/elpa.scm (guix-import-elpa): Likewise.
* guix/scripts/import/gem.scm (guix-import-gem): Likewise.
* guix/scripts/import/hackage.scm (guix-import-hackage): Likewise.
* guix/scripts/import/opam.scm (guix-import-opam): Likewise.
* guix/scripts/import/pypi.scm (guix-import-pypi): Likewise.
* guix/scripts/import/stackage.scm (guix-import-stackage): Likewise.
* tests/gem.scm ("gem-recursive-import"): Likewise.
* tests/import-utils.scm ("recursive-import"): Likewise.
Co-authored-by: Brian Leung <bkleung89@gmail.com>
| Ludovic Courtès |
| 2019-12-11 | import: utils: 'recursive-import' returns packages in topological order....* guix/import/utils.scm (topological-sort): New procedure.
(recursive-import): Rewrite to use it.
* tests/import-utils.scm ("recursive-import"): New test.
* guix/import/cran.scm (cran->guix-package): Always return two values.
* guix/scripts/import/cran.scm (guix-import-cran): Remove 'reverse' call
on 'cran-recursive-import' result.
* guix/scripts/import/crate.scm (guix-import-crate): Likewise.
* guix/scripts/import/elpa.scm (guix-import-elpa): Likewise.
* guix/scripts/import/gem.scm (guix-import-gem): Likewise.
* guix/scripts/import/hackage.scm (guix-import-hackage): Likewise.
* guix/scripts/import/opam.scm (guix-import-opam): Likewise.
* guix/scripts/import/pypi.scm (guix-import-pypi): Likewise.
* guix/scripts/import/stackage.scm (guix-import-stackage): Likewise.
* tests/gem.scm ("gem-recursive-import"): Change the order of package
expressions accordingly.
| Ludovic Courtès |
| 2019-12-10 | profiles: Use 'getpwuid' when $USER and $LOGNAME are undefined....Reported by YOANN P <yoann_mac_donald@hotmail.com>.
* guix/profiles.scm (%profile-directory): Fall back to 'getpwuid' when
"USER" and "LOGNAME" are undefined.
| Ludovic Courtès |
| 2019-12-10 | pack: Clarify the /bin/sh requirement for Singularity....* guix/scripts/pack.scm (squashfs-image)[symlinks*]: New variable.
[build]: Use it instead of SYMLINKS.
(guix-pack): Emit a warning and a hint when "bash" and "bash-minimal"
are missing and PACK-FORMAT is 'squashfs.
* doc/guix.texi (Invoking guix pack): Document the /bin/sh requirement
for Singularity.
| Ludovic Courtès |
| 2019-12-08 | lint: Add '--load-path' option....* guix/scripts/lint.scm (%options): Add '--load-path' option.
* doc/guix.texi: Document it.
* tests/guix-lint.sh: Test it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| zimoun |
| 2019-12-08 | emacs-build-system: Move the source directory to the start of EMACSLOADPATH....Fixes issue #38479 (see: https://bugs.gnu.org/38479).
* guix/build/emacs-build-system.scm (add-source-to-load-path): Move the source
directory to the start of the EMACSLOADPATH environment variable.
Reported-by: Diego Nicola Barbato <dnbarbato@posteo.de>
| Maxim Cournoyer |
| 2019-12-08 | emacs-build-system: Make the order of the phases more clear....* guix/build/emacs-build-system.scm (%standard-phases): Re-arrange to explicit
the ordering of phases.
| Maxim Cournoyer |
| 2019-12-07 | build-system: qt: Fix output missing in wrapped variables....* guix/build/qt-build-system .scm (handle-output): Use directory of
output, not its name.
| Hartmut Goebel |
| 2019-12-07 | file-systems: Add support for 'strict-atime' and 'lazy-time' flags....* guix/build/syscalls.scm (MS_LAZYTIME): New variable.
* gnu/build/file-systems.scm (mount-flags->bit-mask): Add match rules for
'strict-atime' and 'lazy-time'.
* doc/guix.texi (File Systems): Add 'strict-atime' and 'lazy-time' to the list
of supported flags.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
| Guillaume Le Vaillant |
| 2019-12-07 | guix system: Add "describe" action....* guix/scripts/system.scm (show-help): Add "describe".
(process-command): Handle it.
(guix-system): Likewise.
* doc/guix.texi (Invoking guix system): Document it.
| Ludovic Courtès |
| 2019-12-07 | guix system: "list-generations" displays provenance info....* guix/scripts/pull.scm (channel-commit-hyperlink): Export.
* guix/scripts/system.scm (display-system-generation)
[display-channel]: New procedure.
Read the "provenance" file of GENERATION and display channel info and
the configuration file name when available.
| Ludovic Courtès |
| 2019-12-07 | guix system: Use 'provenance-service-type', add "--save-provenance"....* guix/scripts/system.scm (show-help, %options): Add "--save-provenance".
(process-action): Define 'save-provenance?' and 'transform'; call
'transform' on the OS.
* doc/guix.texi (Invoking guix system): Document it under 'reconfigure'.
(Service Reference): Mention that 'provenance-service-type' is
automatically added by 'reconfigure' & 'init'.
| Ludovic Courtès |
| 2019-12-07 | derivations: Add 'derivation-input-fold'....* guix/derivations.scm (derivation-input-fold): New procedure.
(substitution-oracle)[closure]: Rewrite in terms of
'derivation-input-fold'.
* tests/derivations.scm ("derivation-input-fold"): New test.
| Ludovic Courtès |
| 2019-12-05 | gnu: Really move lisp libraries to lisp-xyz, uglify-js to javascript and stum......* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
javascript module instead of lisp.
| Pierre Neidhardt |
| 2019-12-05 | Revert "gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascrip......This reverts commit ac1ee30f4f7f9d0ae2a655676b0e8b9eb90a35dd, which
still breaks ‘guix pull’.
| Tobias Geerinckx-Rice |
| 2019-12-05 | Revert "build-system/linux-module: Accept a #:make-flags keyword."...I should've tested this better before pushing the commit.
This reverts commit fabd4900d8fb739a55e2dff76dee3a29b2a90bb1.
| Efraim Flashner |
| 2019-12-05 | gnu: Properly move lisp libraries to lisp-xyz, uglify-js to javascript and st......* gnu/local.mk: Include lisp-xyz.scm.
* gnu/packages/lisp-xyz.scm: New file.
* gnu/packages/lisp.scm: Move all lisp libraries to lisp-xyz.scm, uglify-js to
javascript.scm and stumpwm to wm.scm.
* gnu/packages/javascript.scm: Add uglify-js.
* gnu/packages/wm.scm: Add stumpwm.
* gnu/packages/bioinformatics.scm: Find uglify-js in javascript.scm.
* gnu/packages/machine-learning.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* gnu/packages/web.scm: Find uglify-js in javascript.scm.
* gnu/packages/web-browsers.scm: Depend on lisp-xyz.scm instead of lisp.scm.
* guix/build-system/minify.scm (default-uglify-js): Find uglify-js in
javascript module instead of lisp.
| Pierre Neidhardt |
| 2019-12-04 | Merge branch 'staging' | Marius Bakke |
| 2019-12-04 | ssh: 'open-ssh-session' can be passed the expected host key....* guix/ssh.scm (open-ssh-session): Add #:host-key parameter.
Pass #:knownhosts to 'make-session'. When HOST-KEY is true, call
'authenticate-server*' instead of 'authenticate-server'.
| Ludovic Courtès |
| 2019-12-04 | ssh: Always authenticate the server [security fix]....Until now, users of 'open-ssh-session', including "guix deploy" and
"GUIX_DAEMON_SOCKET=ssh://…" (but not "guix offload"), would not
authenticate the SSH server they're talking to.
* guix/ssh.scm (open-ssh-session): Call 'authenticate-server'.
| Ludovic Courtès |
| 2019-12-04 | ssh: Add 'authenticate-server*' and use it for offloading....* guix/scripts/offload.scm (host-key->type+key): Remove.
(open-ssh-session): Replace server authentication code with a call to
'authenticate-server*'.
* guix/ssh.scm (host-key->type+key, authenticate-server*): New
procedures.
| Ludovic Courtès |
| 2019-12-04 | substitute: Remove unused procedure....This became unused with commit
a9468b422b6df2349a3f4d1451c9302c3d77011b.
* guix/scripts/substitute.scm (assert-valid-signature): Remove.
| Ludovic Courtès |
| 2019-12-04 | build: emacs-build-system: Unify the installation directory....This change aims to reduce the length of the EMACSLOADPATH environment
variable, which was found to cause issues such as
<https://bugs.gnu.org/38309>.
It should also enable discovery of newly installed packages without refreshing
the session's EMACSLOADPATH of the user profile (e.g., when launching Emacs
from the desktop manager application launcher), as discussed in
<https://bugs.gnu.org/38309>.
* guix/build/emacs-build-system.scm (%legacy-install-suffix): Rename to...
(%install-dir): ...this.
(%install-suffix): Remove variable.
(build): Adjust installation target directory.
(patch-el-files): Likewise.
(install): Likewise.
(move-doc): Likewise.
(make-autoloads): Likewise.
Signed-off-by: Clément Lassieur <clement@lassieur.org>
| Maxim Cournoyer |
| 2019-12-04 | build-system/linux-module: Accept a #:make-flags keyword....Fixes bug#37882.
* guix/build-system/linux-module.scm (linux-module-build): Accept a
MAKE-FLAGS argument.
<builder>: Pass it on.
| Tobias Geerinckx-Rice |
| 2019-12-02 | lint: archival: Gracefully handle network failures....* guix/lint.scm (check-archival): Wrap re-throw in 'with-networking-fail-safe'.
| Ludovic Courtès |
| 2019-12-01 | guix: Add the 'qt' build system....* guix/build-system/qt.scm, guix/build/qt-build-system.scm: New files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Buiild systems): Add the new build system.
| Hartmut Goebel |
| 2019-12-01 | scripts: system: Add --target option....* guix/scripts/system.scm (%options): Add target option,
(%default-options): ditto,
(process-action): Rename existing target variable to target-file and pass new
target variable to run-with-store procedure.
| Mathieu Othacehe |
| 2019-11-30 | gexp: 'local-file' properly resolves non-literal relative file names....* guix/gexp.scm (local-file): Distinguish the case where FILE is a
literal string and when it's not. Add a clause for when FILE is not a
literal string.
* tests/gexp.scm ("local-file, non-literal relative file name"): New test.
* doc/guix.texi (G-Expressions): Update accordingly.
| Ludovic Courtès |
| 2019-11-30 | guix: import: Fix importing dune project....* guix/import/opam.scm: Detect dune projects from dependencies, then
filter dune from dependencies.
| Julien Lepiller |
| 2019-11-30 | guix: import: Fix opam importer....* guix/import/opam.scm: Allow line breaks in strings.
| Julien Lepiller |
| 2019-11-29 | ui: 'with-profile-lock' keeps going upon ENOLCK....* guix/build/syscalls.scm (call-with-file-lock/no-wait): Really pass
ARGS to HANDLER. Return #f when HANDLER is called.
* guix/ui.scm (profile-lock-handler): Emit a mere warning upon ENOLCK.
| Ludovic Courtès |
| 2019-11-29 | ui: Factorize 'with-profile-lock'....* guix/ui.scm (profile-lock-handler, profile-lock-file): New
procedures.
(with-profile-lock): New macro.
* guix/scripts/package.scm (process-actions): Use 'with-profile-lock'
instead of 'with-file-lock/no-wait'.
* guix/scripts/pull.scm (guix-pull): Likewise.
| Ludovic Courtès |
| 2019-11-28 | pull, describe: Emit hyperlinks for commit identifiers....* guix/scripts/pull.scm (%vcs-web-views): New variable.
(channel-commit-hyperlink): New procedure.
(display-news-entry): Add 'channel' parameter. When
'supports-hyperlinks?' returns true, call 'channel-commit-hyperlink'.
(display-profile-content): Likewise, and define CHANNEL.
(display-channel-specific-news): Pass CHANNEL to 'display-news-entry'.
* guix/ui.scm (hyperlink): Make public.
| Ludovic Courtès |
| 2019-11-28 | Merge branch 'master' into staging | Marius Bakke |
| 2019-11-28 | ui: 'display-generation' emits a hyperlink for the generation....* guix/ui.scm (supports-hyperlinks?): Make 'port' optional.
(display-generation): Use 'file-hyperlink' for the heading when
'supports-hyperlinks?' returns true.
| Ludovic Courtès |
| 2019-11-28 | ui: Add 'file-hyperlink'....* guix/ui.scm (file-hyperlink): New procedure.
(location->hyperlink): Use it.
| Ludovic Courtès |
