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2020-05-26Merge branch 'master' into stagingMarius Bakke
2020-05-15channels: Move quirks and patches to (guix quirks).Ludovic Courtès
* guix/channels.scm (apply-patches): Don't access <patch> record directly; use 'applicable-patch?' and 'apply-patch' instead. (<patch>, syscalls-reexports-local-variables?) (guile-2.2.4, %quirks, %bug-41028-patch, %patches): Move to... * guix/quirks.scm: ... here. New file. (apply-patch, applicable-patch?): New procedures.
2020-05-14pack: Add relocation via ld.so and fakechroot.Ludovic Courtès
* gnu/packages/aux-files/run-in-namespace.c (HAVE_EXEC_WITH_LOADER): New macro. (bind_mount): Rename to... (mirror_directory): ... this. Add 'firmlink' argument and use it instead of calling mkdir/open/close/mount directly. (bind_mount, make_symlink): New functions. (exec_in_user_namespace): Adjust accordingly. (exec_with_loader) [HAVE_EXEC_WITH_LOADER]: New function. (exec_performance): New function. (engines): Add them. * guix/scripts/pack.scm (wrapped-package)[fakechroot-library] [audit-module]: New procedures. [audit-source]: New variable. [build](elf-interpreter, elf-loader-compile-flags): New procedures. (build-wrapper): Use them. * tests/guix-pack-relocatable.sh: Test with 'GUIX_EXECUTION_ENGINE=fakechroot'. * doc/guix.texi (Invoking guix pack): Document the 'performance' and 'fakechroot' engines. * gnu/packages/aux-files/pack-audit.c: New file. * Makefile.am (AUX_FILES): Add it.
2020-05-14store: 'mapm/accumulate-builds' preserves '%current-target-system'.Ludovic Courtès
Fixes <https://bugs.gnu.org/41182>. * guix/store.scm (mapm/accumulate-builds): Pass #:system and #:target to 'run-with-store'. * tests/store.scm ("mapm/accumulate-builds, %current-target-system"): New test. * tests/guix-pack.sh: Add 'guix pack -d --target' test.
2020-05-14packages: Ensure bags are insensitive to '%current-target-system'.Ludovic Courtès
Fixes a bug whereby a bag's transitive dependencies would depend on the global '%current-target-system' value. Partly fixes <https://issues.guix.gnu.org/41182>. * guix/packages.scm (bag-transitive-inputs) (bag-transitive-build-inputs, bag-transitive-target-inputs): Parameterize '%current-target-system'. * tests/packages.scm ("package->bag, sensitivity to %current-target-system"): New test.
2020-05-14pack: Do not cross-compile the image building tools.Ludovic Courtès
Until now, something like: guix pack -f docker --target=arm-linux-gnueabihf would attempt to cross-compile tar. * guix/scripts/pack.scm (self-contained-tarball): Pass #:target to 'gexp->derivation'. (squashfs-image): Use #+ instead of #$ for ARCHIVER. Use 'file-append' instead of 'string-append'. Pass #:target to 'gexp->derivation'. (docker-image): Likewise.
2020-05-14syscalls: Add 'getxattr'.Jan (janneke) Nieuwenhuizen
* guix/build/syscalls.scm (getxattr): New procedure. * tests/syscalls.scm ("getxattr, setxattr"): Test it, together with setxattr.
2020-05-13compile: Reduce optimization levels for gnu/services and gnu/packages.Ludovic Courtès
* guix/build/compile.scm (optimization-options)[strip-option] [override-option]: New procedures. Add case for "gnu/services". Change "gnu/packages" to '-O0 -Opartial-eval'.
2020-05-13syscalls: Add 'setxattr'.Jan (janneke) Nieuwenhuizen
* guix/build/syscalls.scm (setxattr): New procedure. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2020-05-13guix: cran: Add missing default R package.pimi
* guix/import/cran.scm (default-r-packages): Add "datasets" to the list of default R packages. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-05-13mailmap: Update entries for Nikita.nikita
* .mailmap: change email and name for Nikita. * Makefile.am, doc/guix.texi, etc/completion/fish/guix.fish, gnu/packages/accessibility.scm, gnu/packages/admin.scm, gnu/packages/audio.scm, gnu/packages/autotools.scm, gnu/packages/cdrom.scm, gnu/packages/check.scm, gnu/packages/cinnamon.scm, gnu/packages/compression.scm, gnu/packages/crypto.scm, gnu/packages/databases.scm, gnu/packages/django.scm, gnu/packages/dns.scm, gnu/packages/elixir.scm, gnu/packages/emacs-xyz.scm, gnu/packages/emacs.scm, gnu/packages/enlightenment.scm, gnu/packages/erlang.scm, gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/forth.scm, gnu/packages/fvwm.scm, gnu/packages/games.scm, gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm, gnu/packages/gtk.scm, gnu/packages/guile-wm.scm, gnu/packages/guile-xyz.scm, gnu/packages/haskell-apps.scm, gnu/packages/haskell-check.scm, gnu/packages/haskell-crypto.scm, gnu/packages/haskell-xyz.scm, gnu/packages/haskell.scm, gnu/packages/image-viewers.scm, gnu/packages/image.scm, gnu/packages/irc.scm, gnu/packages/language.scm, gnu/packages/libcanberra.scm, gnu/packages/linux.scm, gnu/packages/lisp-xyz.scm, gnu/packages/lisp.scm, gnu/packages/lolcode.scm, gnu/packages/lxde.scm, gnu/packages/lxqt.scm, gnu/packages/mail.scm, gnu/packages/markup.scm, gnu/packages/mate.scm, gnu/packages/maths.scm, gnu/packages/mc.scm, gnu/packages/messaging.scm, gnu/packages/music.scm, gnu/packages/ncurses.scm, gnu/packages/networking.scm, gnu/packages/nickle.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm, gnu/packages/perl-check.scm, gnu/packages/perl.scm, gnu/packages/python-compression.scm, gnu/packages/python-crypto.scm, gnu/packages/python-web.scm, gnu/packages/python-xyz.scm, gnu/packages/python.scm, gnu/packages/qt.scm, gnu/packages/ruby.scm, gnu/packages/rust.scm, gnu/packages/scheme.scm, gnu/packages/serialization.scm, gnu/packages/shells.scm, gnu/packages/ssh.scm, gnu/packages/suckless.scm, gnu/packages/tbb.scm, gnu/packages/telephony.scm, gnu/packages/text-editors.scm, gnu/packages/textutils.scm, gnu/packages/time.scm, gnu/packages/tls.scm, gnu/packages/tor.scm, gnu/packages/version-control.scm, gnu/packages/video.scm, gnu/packages/vim.scm, gnu/packages/web.scm, gnu/packages/wm.scm, gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/services/certbot.scm, gnu/services/desktop.scm, gnu/services/version-control.scm, gnu/services/web.scm, guix/import/hackage.scm, guix/licenses.scm: Likewise. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2020-05-11guix graph: Add '--path'.Ludovic Courtès
* guix/scripts/graph.scm (display-path): New procedure. (%options, show-help): Add '--path'. (guix-graph): Handle it. * tests/guix-graph.sh: Add tests. * doc/guix.texi (Invoking guix graph): Document it. (Invoking guix size): Mention it.
2020-05-11graph: Add 'shortest-path'.Ludovic Courtès
* guix/graph.scm (shortest-path): New procedure. * tests/graph.scm ("shortest-path, packages + derivations") ("shortest-path, reverse packages") ("shortest-path, references"): New tests.
2020-05-11graph: reference/referrer node types work with graph traversal.Ludovic Courtès
The graph traversal procedures in (guix graph) assume that nodes can be compared with 'eq?', which was not the case for nodes of %REFERENCE-NODE-TYPE and %REFERRER-NODE-TYPE (strings). * guix/scripts/graph.scm (intern): New procedure. (ensure-store-items, references*) (%reference-node-type, non-derivation-referrers) (%referrer-node-type): Use it on all store items. * tests/graph.scm ("node-transitive-edges, references"): New test.
2020-05-11guix package, show: Support multiple queries.zimoun
* guix/scripts/package.scm (process-query): Show multiple queries. * guix/scripts/show.scm (guix-show): Reverse to display in order. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-05-08Merge branch 'core-updates'Marius Bakke
2020-05-07build-system/emacs: Hide the 'delete' binding from (guix build utils).Marius Bakke
This gets rid of a warning from 'compute-guix-derivation.drv' when running on Guile 3.0. (guix build emacs-build-system) includes (srfi srfi-1) anyway. * guix/build/emacs-build-system.scm: Do not import 'delete' from (guix build utils).
2020-05-07nar: 'with-temporary-store-file' uses a single connectionCaleb Ristvedt
Previously the 'with-store' form was entered every time a different temporary file was tried. This caused there to be as many simultaneous open connections as there were attempts, and prevented the (loop ...) call from being a tail call. This change fixes that. * guix/nar.scm (with-temporary-store-file): open connection once prior to entering the loop.
2020-05-07nar: 'finalize-store-file' follows proper store lock protocol.Caleb Ristvedt
* guix/nar.scm (finalize-store-file): check for deletion token when acquiring lock, write deletion token and delete lock file before releasing lock.
2020-05-07guix system: 'docker-image' honors '--network'.Ludovic Courtès
* gnu/system/vm.scm (system-docker-image): Add #:shared-network? and pass it to 'containerized-operating-system'. (qemu-image): * guix/scripts/system.scm (system-derivation-for-action): Pass #:shared-network? to 'system-docker-image'. * doc/guix.texi (Invoking guix system): Document it.
2020-05-07channels: Add patch for <https://bugs.gnu.org/41028>.Ludovic Courtès
Without this patch, we couldn't jump from here to commits before 05e783871c2c69b402e088863d46f5be7915ac74 because the 'compute-guix-derivation' script would crash with an unbound-variable error for 'call-with-new-thread'. Fixes <https://bugs.gnu.org/41028>. Reported by Christopher Baines <mail@cbaines.net>. * guix/channels.scm (%bug-41028-patch): New variable. (%patches): Add it.
2020-05-07channels: Add mechanism to patch checkouts of the 'guix channel.Ludovic Courtès
* guix/channels.scm (<patch>): New record type. (apply-patches): New procedure. (latest-channel-instance)[dot-git?]: New procedure. Use 'update-cached-checkout' and 'add-to-store' instead of 'latest-repository-commit'. Call 'apply-patches' when CHANNEL is the 'guix channel. (%patches): New variable. * guix/git.scm (url+commit->name): Make public. * tests/channels.scm ("latest-channel-instances includes channel dependencies") ("latest-channel-instances excludes duplicate channel dependencies"): Mock 'update-cached-checkout' instead of 'latest-repository-commit'. Wrap body in 'with-store' and pass the store to 'latest-channel-instances'.
2020-05-07channels: Add 'latest-channel-instance'.Ludovic Courtès
* guix/channels.scm (latest-channel-instance): New procedure. (latest-channel-instances): Use it.
2020-05-07syscalls: Add ioctl flags for the Hurd.Jan (janneke) Nieuwenhuizen
Use #include <stdio.h> #include <net/if.h> #include <hurd/ioctl.h> int main () { printf ("SIOCSIFFLAGS #x%x\n", SIOCSIFFLAGS); printf ("SIOCGIFADDR #x%x\n", SIOCGIFADDR); printf ("SIOCSIFADDR #x%x\n", SIOCSIFADDR); printf ("SIOCGIFNETMASK #x%x\n", SIOCGIFNETMASK); printf ("SIOCSIFNETMASK #x%x\n", SIOCSIFNETMASK); #if 0 printf ("SIOCADDRT #x%x\n", SIOCADDRT); printf ("SIOCDELRT #x%x\n", SIOCDELRT); #endif } to fill in some blanks. Adding and removing route apparently not supported. * guix/build/syscalls.scm (SIOCSIFFLAGS SIOCGIFADDR, SIOCSIFADDR, SIOCGIFNETMASK, SIOCSIFNETMASK):
2020-05-06Merge branch 'master' into core-updatesMarius Bakke
2020-05-05syscalls: 'define-c-struct' supports cross-compilation.Ludovic Courtès
Reported by Jan (janneke) Nieuwenhuizen <janneke@gnu.org>. Before that, we'd always use the 'sizeof' and 'alignof' value obtained from the host at macro-expansion time. * guix/build/syscalls.scm (sizeof*, alignof*): When the target word size differs from the host word size, emit a call to 'sizeof'/'alignof'.
2020-05-05Merge branch 'master' into core-updatesMarius Bakke
2020-05-05image: Add a new API.Mathieu Othacehe
Raw disk-images and ISO9660 images are created in a Qemu virtual machine. This is quite fragile, very slow, and almost unusable without KVM. For all these reasons, add support for host image generation. This implies the use new image generation mechanisms. - Raw disk images: images of partitions are created using tools such as mke2fs and mkdosfs depending on the partition file-system type. The partition images are then assembled into a final image using genimage. - ISO9660 images: the ISO root directory is populated within the store. GNU xorriso is then called on that directory, in the exact same way as this is done in (gnu build vm) module. Those mechanisms are built upon the new (gnu image) module. * gnu/image.scm: New file. * gnu/system/image.scm: New file. * gnu/build/image: New file. * gnu/local.mk: Add them. * gnu/system/vm.scm (system-disk-image): Rename to system-disk-image-in-vm. * gnu/ci.scm (qemu-jobs): Adapt to new API. * gnu/tests/install.scm (run-install): Ditto. * guix/scripts/system.scm (system-derivation-for-action): Ditto.
2020-05-05build: store-copy: Export file-size procedure.Mathieu Othacehe
* guix/build/store-copy.scm (file-size): Export it.
2020-05-04openpgp: Add missing type predicate for '&openpgp-invalid-signature-error'.Ludovic Courtès
Reported by brendyyn on #guix. The mistake led to a macro expansion error on Guile 2.2 but not on 3.0.2. * guix/openpgp.scm (&openpgp-invalid-signature-error): Add missing type predicate.
2020-05-04openpgp: Raise error conditions instead of calling 'error'.Ludovic Courtès
* guix/openpgp.scm (&openpgp-error, &openpgp-unrecognized-packet-error) (&openpgp-invalid-signature-error): New error conditions. (openpgp-hash-algorithm): Add 'signature-port' parameter. Raise an error condition instead of calling 'error'. (parse-subpackets): Likewise. (get-data): Raise instead of calling 'error'. (get-openpgp-detached-signature/ascii): Likewise. (get-signature): Likewise.
2020-05-04openpgp: Add 'string->openpgp-packet'.Ludovic Courtès
* guix/openpgp.scm (string->openpgp-packet): New procedure. * tests/openpgp.scm ("verify-openpgp-signature, missing key") ("verify-openpgp-signature, good signatures") ("verify-openpgp-signature, bad signature"): Use it.
2020-05-04openpgp: 'lookup-key-by-{id,fingerprint}' return the key first.Ludovic Courtès
Previously, 'lookup-key-by-{id,fingerprint}' would always return the list of packets where the primary key is first. Thus, the caller would need to use 'find' to actually find the requested key. * guix/openpgp.scm (keyring-insert): Always add KEY to PACKETS. (lookup-key-by-id, lookup-key-by-fingerprint): Change to return the key as the first value. (verify-openpgp-signature): Remove now unneeded call to 'find'. * tests/openpgp.scm ("get-openpgp-keyring"): Adjust accordingly.
2020-05-04openpgp: 'verify-openpgp-signature' looks up by fingerprint when possible.Ludovic Courtès
* guix/openpgp.scm (verify-openpgp-signature): Use 'lookup-key-by-fingerprint' when SIG contains a fingerprint. Honor FINGERPRINT in the 'find' predicate. Upon missing-key, return FINGERPRINT if available. * tests/openpgp.scm ("verify-openpgp-signature, missing key"): Adjust expected value accordingly.
2020-05-04openpgp: Add 'lookup-key-by-fingerprint'.Ludovic Courtès
* guix/openpgp.scm (<openpgp-keyring>)[table]: Rename to... [ids]: ... this. [fingerprints]: New field. (keyring-insert, lookup-key-by-fingerprint): New procedures. (%empty-keyring): Adjust. (get-openpgp-keyring): Manipulate KEYRING instead of its vhash, use 'keyring-insert'. * tests/openpgp.scm ("get-openpgp-keyring"): Test 'lookup-key-by-fingerprint'.
2020-05-04openpgp: Store the issuer key id and fingerprint in <openpgp-signature>.Ludovic Courtès
* guix/openpgp.scm (<openpgp-signature>)[issuer, issuer-fingerprint]: New fields. (openpgp-signature-issuer, openpgp-signature-issuer-fingerprint): Remove. (verify-openpgp-signature): Use 'openpgp-signature-issuer-key-id'. (get-signature): Initialize 'issuer' and 'issuer-fingerprint'. * tests/openpgp.scm ("get-openpgp-detached-signature/ascii"): Adjust accordingly.
2020-05-04openpgp: Decode the issuer-fingerprint signature subpacket.Ludovic Courtès
* guix/openpgp.scm (SUBPACKET-ISSUER-FINGERPRINT): New variable. (openpgp-signature-issuer-fingerprint): New procedure. (key-id-matches-fingerprint?): New procedure. (get-signature): Look for the 'issuer and 'issuer-fingerprint subpackets. Ensure the issuer key ID matches the fingerprint when both are available. (parse-subpackets): Handle SUBPACKET-ISSUER-FINGERPRINT. * tests/openpgp.scm (%rsa-key-fingerprint) (%dsa-key-fingerprint, %ed25519-key-fingerprint): New variables. * tests/openpgp.scm ("get-openpgp-detached-signature/ascii"): Check the result of 'openpgp-signature-issuer-fingerprint'.
2020-05-04Add (guix openpgp).Ludovic Courtès
* guix/openpgp.scm, tests/openpgp.scm, tests/civodul.key, tests/dsa.key, tests/ed25519.key, tests/rsa.key, tests/ed25519.sec: New files. * Makefile.am (MODULES): Add guix/openpgp.scm. (SCM_TESTS): Add tests/openpgp.scm. (EXTRA_DIST): Add tests/*.key and tests/ed25519.sec.
2020-05-02Merge branch 'master' into core-updatesMarius Bakke
2020-05-01profiles: Mark manual database as non-substitutable.Ludovic Courtès
Fixes <https://bugs.gnu.org/40381>. Reported by pkill9 <pkill9@runbox.com>. * guix/profiles.scm (manual-database): Pass #:substitutable? #f.
2020-04-30Merge branch 'master' into core-updatesMarius Bakke
Conflicts: gnu/local.mk gnu/packages/backup.scm gnu/packages/emacs-xyz.scm gnu/packages/guile.scm gnu/packages/lisp.scm gnu/packages/openldap.scm gnu/packages/package-management.scm gnu/packages/web.scm gnu/packages/xorg.scm
2020-04-29Merge branch 'master' into stagingJakub Kądziołka
2020-04-27guix: edit: Make nano the default editor.Raghav Gururajan
* guix/scripts/edit.scm: Make nano the default editor. Nano is sensible default, as it is installed by base system. For development, user can set custom value for $EDITOR. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-04-27import: crate: Gracefully handle non-existent crates.Ludovic Courtès
Fixes <https://bugs.gnu.org/40891>. Reported by Hartmut Goebel <h.goebel@crazy-compilers.com>. * guix/import/crate.scm (crate->guix-package): Wrap value of 'version-number' and 'version*' in (and crate ...).
2020-04-26channels: Use a declarative profile.Ludovic Courtès
* guix/channels.scm (package-cache-file): Use 'profile' instead of 'profile-derivation'.
2020-04-26pack: Use a declarative profile.Ludovic Courtès
* guix/scripts/pack.scm (guix-pack): Use a declarative profile instead of 'profile-derivation'.
2020-04-26profiles: Add lowerable <profile> record type.Ludovic Courtès
* guix/profiles.scm (<profile>): New record type. * tests/profiles.scm ("<profile>"): New test.
2020-04-26substitute: Close port at the end of http-multiple-get.Christopher Baines
* guix/scripts/substitute.scm (http-multiple-get): Add close-port call.
2020-04-26substitute: Make http-multiple-get batch size configurable.Christopher Baines
* guix/scripts/substitute.scm (http-multiple-get): Add batch-size parameter.
2020-04-26substitute: Use the same port for multiple request batches.Christopher Baines
In http-multiple-get. * guix/scripts/substitute.scm (http-multiple-get): Switch port to p in one occurrence.
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