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Add a new phase validating the usability of installed Python packages.
* gnu/packages/aux-files/python/sanity-check.py: New file.
* Makefile.am (AUX_FILES): Register it.
* guix/build-system/python.scm (sanity-check.py): New variable.
(lower): Add the script as an implicit input.
* guix/build/python-build-system.scm: Remove trailing #t.
(sanity-check): New phase.
(%standard-phases): Use it.
* tests/builders.scm: (make-python-dummy)
(dummy-ok, dummy-dummy-nosetuptools, dummy-fail-requirements)
(dummy-fail-import, dummy-fail-console-script): New variables.
("python-build-system: dummy-ok")
("python-build-system: dummy-dummy-nosetuptools")
("python-build-system: dummy-fail-requirements")
("python-build-system: dummy-fail-import")
("python-build-system: dummy-fail-console-script"): Add tests.
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* guix/scripts/package.scm (export-manifest): New procedure.
(show-help, %options): Add '--export-manifest'.
(process-query): Honor it.
* guix/build/profiles.scm (build-profile): Mention it.
* tests/guix-package.sh: Test it.
* doc/guix.texi (Invoking guix package): Document it.
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* guix/utils.scm (version-unique-prefix): New procedure.
* tests/utils.scm ("version-unique-prefix"): New test.
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* guix/profiles.scm (manifest->code): New procedure.
* tests/profiles.scm ("manifest->code, simple")
("manifest->code, simple, versions")
("manifest->code, transformations"): New tests.
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This test goes from 58s to 10s wall-clock time.
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>.
* tests/packages.scm ("fold-available-packages with/without cache"):
Remove 'find-duplicates'. Add 'list->set*' and use it instead of
'find-duplicates', 'delete-duplicates', and 'lset='.
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* guix/store/database.scm (assert-integer): New procedure.
(update-or-insert): Use it to validate NAR-SIZE and TIME.
* tests/store-database.scm ("sqlite-register with incorrect size"): New
test.
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* tests/guix-system.sh: Test 'guix system extension-graph' and 'guix
system shepherd-graph'.
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Before this change, only plain directories, tar or zip archives were supported
as the source of a package for the GNU build system; anything else would cause
the unpack phase to fail. Origins relying on snippets would suffer from the
same problem.
This change adds the support to use files of the following extensions: .gz,
.Z, .bz2, .lz, and .xz, even when they are not tarballs. Files of unknown
extensions are treated as uncompressed files and supported as well.
* guix/packages.scm (patch-and-repack): Only add the compressor utility to the
PATH when the file is compressed. Bind more inputs in the mlet, and use them
for decompressing single files. Adjust the decompression and compression
routines.
[decompression-type]: Remove nested variable.
* guix/build/utils.scm (compressor, tarball?): New procedures. Move
%xz-parallel-args to the new 'compression helpers' section.
* tests/packages.scm: Add tests. Add missing copyright year for Jan.
* guix/build/gnu-build-system.scm (first-subdirectory): Return #f when no
sub-directory was found.
(unpack): Support more file types, including uncompressed plain files.
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* guix/serialization.scm (read-string-pairs): New procedure.
* guix/store.scm (read-arg): Add support for 'string-pairs'.
(find-roots): New procedure.
* tests/store.scm ("add-indirect-root and find-roots"): New test.
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* tests/swh.scm (%origin): Change "visits_url" to "origin_visits_url".
(%visits): New variable.
("origin-visit, no snapshots"): New test.
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The 'stack' variable could be #f when code is interpreted, which in
practice happens when running in "legacy" mode--i.e., when
'open-inferior' invokes "guile" instead of "guix repl".
* guix/repl.scm (send-repl-response)[handle-exception]: Check whether
STACK is true before passing it to 'stack->frames'.
* tests/inferior.scm ("&inferior-exception, legacy mode"): New test.
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* tests/inferior.scm ("inferior-eval-with-store, exception")
("inferior-eval-with-store, not a procedure"): New tests.
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* guix/upstream.scm (upstream-source-compiler): New procedure.
(%updaters): Set! it.
* guix/transformations.scm (transform-package-latest): New procedure.
(%transformations): Add 'with-latest'.
(%transformation-options, show-transformation-options-help/detailed):
Add '--with-latest'.
* tests/transformations.scm ("options->transformation, with-latest"):
New test.
* doc/guix.texi (Package Transformation Options): Document it.
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The path normalization of `--root` option of `guix environment` was
buggy as it appended full argument after normalized directory. This
patch fixes it.
* guix/scripts/environment.scm (register-gc-root): Fix gc-root path
normalization.
* tests/guix-environment.sh: Add test.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
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* guix/scripts/system.scm (system-derivation-for-action): Rename 'disk-image'
command 'image'. Warn when using the now deprecated 'disk-image' command.
(show-help): Adapt accordingly.
(guix-system): Ditto.
* tests/guix-system.sh: Ditto.
* gnu/system/examples/bare-hurd.tmpl: Ditto.
* doc/guix.texi (Building the Installation Image,
Building the Installation Image for ARM Boards,
Invoking guix pack,
Invoking guix system): Adapt documentation.
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* gnu/services/networking.scm (openntpd-configuration): Remove
"allow-large-adjustment?" field.
(openntpd-shepherd-service): Remove use of "allow-large-adjustment?"
configuration field and "-s" daemon option.
* tests/networking.scm (%openntpd-conf-sample): Remove
"allow-large-adjustment?" field.
* doc/guix.texi (Networking Services)[openntpd-service-type]: Remove
"allow-large-adjustment?" field from sample configuration.
[openntpd-configuration]: Remove description of "allow-large-adjustment?"
field.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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This separation between the code for dealing with narinfos from the code doing
that for a purpose should make things clearer, and better support components
other that the substitute script in using this code.
This is just moving the code around, no code should have been significantly
changed.
* guix/scripts/substitute.scm (<narinfo>): Move record type to (guix narinfo).
(fields->alist, narinfo-hash-algorithm+value, narinfo-hash->sha256,
narinfo-signature->canonical-sexp, narinfo-maker, read-narinfo,
narinfo-sha256, valid-narinfo?, write-narinfo, narinfo->string,
string->narinfo, equivalent-narinfo?, supported-compression?,
compresses-better?, narinfo-best-uri): Move procedures to (guix narinfo).
(%compression-methods): Move variable to (guix narinfo).
* guix/narinfo.scm: New file.
* Makefile.am (MODULES): Add it.
* po/guix/POTFILES.in: Add 'guix/narinfo.scm'.
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Conflicts:
gnu/local.mk
gnu/packages/cmake.scm
gnu/packages/curl.scm
gnu/packages/gl.scm
gnu/packages/glib.scm
gnu/packages/guile.scm
gnu/packages/node.scm
gnu/packages/openldap.scm
gnu/packages/package-management.scm
gnu/packages/python-xyz.scm
gnu/packages/python.scm
gnu/packages/tls.scm
gnu/packages/vpn.scm
gnu/packages/xorg.scm
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This issue is caught with Guile-JSON 4.4.1, but not by 4.3.2.
* tests/crate.scm (test-root-dependencies): Add missing comma.
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* guix/scripts/publish.scm (compress-nar)[write-compressed-file]: New
procedure.
Use it for 'gzip' and 'lzip'. Add 'zstd.
(nar-response-port, string->compression-type): Add case for 'zstd'.
* tests/publish.scm (zstd-supported?): New procedure.
("/nar/zstd/*"): New test.
* doc/guix.texi (Invoking guix publish): Document zstd compression.
(Base Services): Add cross-reference to the above node.
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* guix/utils.scm (lzip-port): Return a single value.
(zstd-port): New procedure.
(decompressed-port, compressed-output-port): Add 'zstd' case.
* tests/utils.scm (test-compression/decompression): Test 'zstd' when
the (zstd) module is available.
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This procedure was unused except in one test.
* guix/utils.scm (compressed-port): Remove.
* tests/utils.scm (test-compression/decompression): Rewrite to use
'compressed-output-port' instead.
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* gnu/services/shepherd.scm (shepherd-service-type): Require a
'description' form.
* gnu/services/base.scm (root-file-system-service-type)
(rngd-service-type, host-name-service-type):
(virtual-terminal-service-type, console-keymap-service-type)
(syslog-service-type, swap-service-type)
(kmscon-service-type): Add description.
* gnu/services/networking.scm (dhcp-client-service-type): Likewise.
* gnu/system/install.scm (cow-store-service-type): Likewise.
* gnu/system/linux-container.scm (dummy-networking-service-type):
Likewise.
* gnu/system/mapped-devices.scm (device-mapping-service-type):
Likewise.
* tests/guix-system.sh: Likewise.
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Fixes <https://issues.guix.gnu.org/30116>.
Before this change, the presence of a NUL character on a line meant that
the (glibc) regexp engine used by Guile would either 1. stop scanning the
string or 2. crash with the error "string contains #\\nul character",
depending on the locale used.
This change works around this limitation by first replacing the NUL character
by an unused Unicode code point, doing the substitution, then reverting the
replacement.
* guix/build/utils.scm (unused-private-use-code-point)
(replace-char): New procedures.
(substitute): Make use of the above procedures to work around the NUL
character regexp engine limitation.
* tests/build-utils.scm: Add tests.
Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
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* guix/scripts/hash.scm (guix-hash): When 'recursive? is true, use
'open-hash-port' instead of 'open-sha256-port'.
* tests/guix-hash.sh: Add test for 'guix hash -r -H sha512'.
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Suggested by Philippe Swartvagher <philippe.swartvagher@inria.fr>.
* guix/transformations.scm (transform-package-patches): New procedure.
(%transformations): Add it as 'with-patch'.
(%transformation-options, show-transformation-options-help/detailed):
Add '--with-patch'.
* tests/transformations.scm ("options->transformation, with-patch"): New
test.
* doc/guix.texi (Package Transformation Options): Document it.
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Fixes <https://bugs.gnu.org/45453>.
* guix/import/utils.scm (alist->package): Find plain license names in (guix
licenses) first, and only fall back to SPDX names on error.
* tests/import-utils.scm ("alist->package with SPDX license name 1/2",
"alist->package with SPDX license name 2/2"): New tests.
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* gnu/bootloader/grub.scm (grub-configuration-file): New parameter
store-crypto-devices.
[crypto-devices]: New helper function.
[builder]: Use crypto-devices.
* gnu/machine/ssh.scm (roll-back-managed-host): Use
boot-parameters-store-crypto-devices to provide its contents to the
bootloader configuration generation process.
* gnu/tests/install.scm (%encrypted-root-not-boot-os,
%encrypted-root-not-boot-os): New os declaration.
(%encrypted-root-not-boot-installation-script): New script, whose contents
were initially taken from %encrypted-root-installation-script.
(%test-encrypted-root-not-boot-os): New test.
* gnu/system.scm (define-module): Export
operating-system-bootoader-crypto-devices and
boot-parameters-store-crypto-devices.
(<boot-parameters>): Add field store-crypto-devices.
(read-boot-parameters): Parse store-crypto-devices field.
[uuid-sexp->uuid]: New helper function extracted from
device-sexp->device.
(operating-system-bootloader-crypto-devices): New function.
(operating-system-bootcfg): Use
operating-system-bootloader-crypto-devices to provide its contents to
the bootloader configuration generation process.
(operating-system-boot-parameters): Add store-crypto-devices to the
generated boot-parameters.
(operating-system-boot-parameters-file): Likewise to the file with
the serialized structure.
* guix/scripts/system.scm (reinstall-bootloader): Use
boot-parameters-store-crypto-devices to provide its contents to the
bootloader configuration generation process.
* tests/boot-parameters.scm (%default-store-crypto-devices): New
variable.
(%grub-boot-parameters, test-read-boot-parameters): Use
%default-store-crypto-devices.
(tests store-crypto-devices): New tests.
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* tests/transformations.scm ("options->transformation, without-tests"):
Ensure TAR has #:tests? #f.
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Guile-JSON 4.3.2 would parse in spite of these typos, but 4.4.1 is
stricter.
* tests/swh.scm (%directory-entries): Add missing comma.
* tests/cve-sample.json: Likewise.
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* tests/store.scm ("substitute, deduplication"): New test.
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* tests/store.scm ("substitute")
("substitute + build-things with output path")
("substitute + build-things with specific output"): Call 'canonical-file?'.
* tests/substitute.scm ("substitute, authorized key"): Check the mtime
and permissions of "substitute-retrieved".
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This way, the hash of the store item can be computed as it is restored,
thereby avoiding an additional file tree traversal ('hashPath' call)
later on in the daemon. Consequently, it should reduce latency between
subsequent substitute downloads.
This is a followup to 5ff521452b9ec2aae9ed8e4bb7bdc250a581f203.
* guix/scripts/substitute.scm (narinfo-hash-algorithm+value): New
procedure.
(process-substitution): Wrap INPUT into a hash input port, 'hashed', and
read from it. Compare the actual and expected hashes, and print a
"hash-mismatch" status line when they differ. When they match, print
not just "success" but also the nar hash and size.
* nix/libstore/build.cc (class SubstitutionGoal)[expectedHashStr]:
Remove.
(SubstitutionGoal::finished): Tokenize 'status'. Parse it and handle
"success" and "hash-mismatch" accordingly. Call 'hashPath' only when
the returned hash is not SHA256.
(SubstitutionGoal::handleChildOutput): Remove 'expectedHashStr'
handling.
* tests/substitute.scm ("substitute, invalid hash"): Rename to...
("substitute, invalid narinfo hash"): ... this.
("substitute, invalid hash"): New test.
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* tests/store.scm ("substitute, corrupt output hash, build trace"): New
test.
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This avoids repeated (mkdir-p "/gnu/store/.links") calls when
deduplicating lots of files.
* guix/store/deduplication.scm (deduplicate): Remove initial call to
'mkdir-p'. Add ENOENT case in 'link' exception handler. Reindent.
* tests/store-deduplication.scm ("deduplicate, ENOSPC"): Check
for (<= links 4) to account for the initial 'link' call.
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* guix/store/database.scm (register-path): Remove.
* tests/store-database.scm ("register-path"): Rename to...
("register-items"): ... this, and use 'register-items' instead of
'register-path'.
("register-path, directory"): Rename to...
("register-items, directory"): ... this, and use 'register-items'
instead of 'register-path'.
("register-path with unregistered references"): Rename to...
("sqlite-register with unregistered references"): ... this.
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* guix/store/database.scm (register-path): Remove #:deduplicate?
and #:reset-timestamps?.
* guix/scripts/system.scm (copy-item): Adjust accordingly.
* tests/store-database.scm ("register-path")
("register-path, directory"): Call 'reset-timestamps'.
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Until now deduplication was performed as an additional pass after
copying files, which involve re-traversing all the files that had just
been copied.
* guix/store/deduplication.scm (copy-file/deduplicate): New procedure.
* tests/store-deduplication.scm ("copy-file/deduplicate"): New test.
* guix/build/store-copy.scm (populate-store): Add #:deduplicate?
parameter and honor it.
* tests/gexp.scm ("gexp->derivation, store copy"): Pass #:deduplicate? #f
to 'populate-store'.
* gnu/build/image.scm (initialize-root-partition): Pass #:deduplicate?
to 'populate-store'. Pass #:deduplicate? #f to 'register-closure'.
* gnu/build/vm.scm (root-partition-initializer): Likewise.
* gnu/build/install.scm (populate-single-profile-directory): Pass
#:deduplicate? #f to 'populate-store'.
* gnu/build/linux-initrd.scm (build-initrd): Likewise.
* guix/scripts/pack.scm (self-contained-tarball)[import-module?]: New
procedure.
[build]: Pass it as an argument to 'source-module-closure'.
* guix/scripts/pack.scm (squashfs-image)[build]: Wrap in
'with-extensions'.
* gnu/system/linux-initrd.scm (expression->initrd)[import-module?]: New
procedure.
[builder]: Pass it to 'source-module-closure'.
* gnu/system/install.scm (cow-store-service-type)[import-module?]: New
procedure. Pass it to 'source-module-closure'.
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Until now, 'populate-store' would reset permissions but not timestamps,
so callers would resort to going through an extra directory traversal to
reset timestamps.
* guix/build/store-copy.scm (reset-permissions): Remove.
(copy-recursively): New procedure.
(populate-store): Pass #:keep-permissions? to 'copy-recursively'.
Remove call to 'reset-permissions'.
* tests/gexp.scm ("gexp->derivation, store copy"): In BUILD-DRV, check
whether 'populate-store' canonicalizes permissions and timestamps.
* gnu/build/image.scm (initialize-root-partition): Pass #:reset-timestamps? #f
to 'register-closure'.
* gnu/build/vm.scm (root-partition-initializer): Likewise.
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This avoids having to traverse and re-read the files that we have just
restored, thereby reducing I/O.
* guix/serialization.scm (dump-file): New procedure.
(restore-file): Add #:dump-file parameter and honor it.
* guix/store/deduplication.scm (tee, dump-file/deduplicate): New
procedures.
* guix/nar.scm (restore-one-item): Pass #:dump-file to 'restore-file'.
(finalize-store-file): Pass #:deduplicate? #f to 'register-items'.
* tests/nar.scm <top level>: Call 'setenv' to set "NIX_STORE".
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* guix/serialization.scm (restore-file): Set the permissions and mtime
of FILE.
* guix/nar.scm (finalize-store-file): Pass #:reset-timestamps? #f to
'register-items'.
* tests/nar.scm (rm-rf): Add 'chmod' calls to ensure files are writable.
("write-file + restore-file with symlinks"): Ensure every file in OUTPUT
passes 'canonical-file?'.
* tests/guix-archive.sh: Run "chmod -R +w" before "rm -rf".
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* guix/serialization.scm (fold-archive): Call PROC with a
'directory-complete tag when done with a directory.
(restore-file): Handle it.
* guix/scripts/archive.scm (list-contents): Likewise.
* guix/scripts/challenge.scm (archive-contents): Likewise.
* tests/nar.scm ("write-file-tree + fold-archive"): Adjust accordingly.
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* guix/glob.scm (string->sglob)
(glob-match?): Add globstar support.
* tests/glob.scm: Update accordingly.
Signed-off-by: Jelle Licht <jlicht@fsfe.org>
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This is a followup to a8dccd4bdc1e58219d4ba08fe1649bf0b8325f44, which
broke the test.
* guix/import/opam.scm (get-opam-repository): Prevent inlining.
* tests/opam.scm ("opam->guix-package"): Mock 'get-opam-repository'.
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This avoids spawning one substitute process per substitution.
* nix/libstore/build.cc (class Worker)[substituter]: New field.
[outPipe, logPipe, pid]: Remove.
(class SubstitutionGoal)[expectedHashStr, status, substituter]: New fields.
(SubstitutionGoal::timedOut): Adjust to check 'substituter'.
(SubstitutionGoal::tryToRun): Remove references to 'outPipe' and
'logPipe'. Run "guix substitute --substitute" as an 'Agent'. Send the
request with 'writeLine'.
(SubstitutionGoal::finished): Likewise.
(SubstitutionGoal::handleChildOutput): Change to fill in
'expectedHashStr' and 'status'.
(SubstitutionGoal::handleEOF): Call 'wakeUp' unconditionally.
(SubstitutionGoal::~SubstitutionGoal): Adjust to check 'substituter'.
* guix/scripts/substitute.scm (process-substitution): Write "success\n"
to stdout upon success.
(%error-to-file-descriptor-4?): New variable.
(guix-substitute): Set 'current-error-port' to file descriptor 4
unless (%error-to-file-descriptor-4?) is false.
Remove "--substitute" arguments. Loop reading line from stdin.
* tests/substitute.scm <top level>: Call '%error-to-file-descriptor-4?'.
(request-substitution): New procedure.
("substitute, no signature")
("substitute, invalid hash")
("substitute, unauthorized key")
("substitute, authorized key")
("substitute, unauthorized narinfo comes first")
("substitute, unsigned narinfo comes first")
("substitute, first narinfo is unsigned and has wrong hash")
("substitute, first narinfo is unsigned and has wrong refs")
("substitute, two invalid narinfos")
("substitute, narinfo with several URLs"): Adjust to new "guix
substitute --substitute" calling convention.
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* nix/libstore/local-store.hh (RunningSubstituter): Remove.
(LocalStore)[runningSubstituter]: Change to unique_ptr<Agent>.
[setSubstituterEnv, didSetSubstituterEnv]: Remove.
[getLineFromSubstituter, getIntLineFromSubstituter]: Take an 'Agent'.
* nix/libstore/local-store.cc (LocalStore::~LocalStore): Remove
reference to 'runningSubstituter'.
(LocalStore::setSubstituterEnv, LocalStore::startSubstituter): Remove.
(LocalStore::getLineFromSubstituter): Adjust to 'run' being an 'Agent'.
(LocalStore::querySubstitutablePaths): Spawn substituter agent if
needed. Adjust to 'Agent' interface.
(LocalStore::querySubstitutablePathInfos): Likewise.
* nix/libstore/build.cc (SubstitutionGoal::tryToRun): Remove call to
'setSubstituterEnv' and add 'setenv' call for "_NIX_OPTIONS" instead.
(SubstitutionGoal::finished): Remove 'readLine' call for 'dummy'.
* guix/scripts/substitute.scm (%allow-unauthenticated-substitutes?):
Remove second argument to 'make-parameter'.
(process-query): Call 'warn-about-missing-authentication'
when (%allow-unauthenticated-substitutes?) is #t.
(guix-substitute): Wrap body in 'parameterize'. Set 'guix-warning-port'
too. No longer exit when 'substitute-urls' returns the empty list. No
longer print newline initially.
* tests/substitute.scm (test-quit): Parameterize 'current-error-port' to
account for the port changes in 'guix-substitute'.
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* guix/import/opam.scm (opam->guix-package): Rename #:repository key
to #:repo.
(opam-recursive-import): Pass #:repo keyword.
* tests/opam.scm (opam->guix-package): Rename #:repository to #:repo.
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In particular, "<origin> patches: same file name -> no warnings" would
have caught the issue which was fixed in commit
21887021b9acf60157b1b0a39c16f2ec6498021b.
* tests/lint.scm (patches: file names): Rename this test case...
("file patches: different file name -> warning"): ... to this.
("file patches: same file name -> no warnings")
("<origin> patches: different file name -> warning")
("<origin> patches: same file name -> no warnings"): New test cases.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* gnu/profiles.scm (packages->manifest): Delete duplicate entries.
* tests/profiles.scm ("packages->manifest, no duplicates"): New test.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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