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2016-01-28packages: Use '@' in package record printers.Mathieu Lirzin
* guix/packages.scm <package>: Use '@' in record printer. * guix/import/cabal.scm <cabal-package>: Likewise * guix/import/elpa.scm <elpa-package>: Likewise. * tests/packages.scm: Adapt to it.
2016-01-28tests: Use 'dummy-origin' for lint tests when possible.Mathieu Lirzin
* guix/tests/lint.scm ("patches: file names", "patches: not found"): Use 'dummy-origin'. 'sha256' field was wrongly set to a string instead of a bytevector.
2016-01-24Merge branch 'master' into core-updatesMark H Weaver
2016-01-22tests: Prevent 'http_proxy' from breaking Web server tests.Ludovic Courtès
* tests/lint.scm: Add call to 'unsetenv' to remove 'http_proxy'. * tests/publish.scm: Likewise.
2016-01-22system: grub: Search root device by label or UUID if possible.Ludovic Courtès
Fixes <http://bugs.gnu.org/22281>. Reported by Christopher Allan Webber <cwebber@dustycloud.org>. * gnu/system/grub.scm (eye-candy): Add 'root-fs' parameter. Replace 'search --file' command in the output with whatever 'grub-root-search' returns. (grub-root-search): New procedure. (grub-configuration-file): Add 'store-fs' parameter. Use 'grub-root-search' instead of hard-coded 'search --file' commands. * gnu/system.scm (store-file-system, operating-system-store-file-system): New procedures. (operating-system-grub.cfg): Use it, and adjust call to 'grub-configuration-file'. * tests/system.scm: New file. * Makefile.am (SCM_TESTS): Add it.
2016-01-20tests: Move beatify-description tests to import-tests.Ben Woodcroft
Fixes <http://bugs.gnu.org/22391>. * tests/cran.scm (beautify-description: use double spacing, beautify-description: transform fragment into sentence). Move from here ... * tests/import-utils.scm: ... to here. New file. * Makefile.am (SCM_TESTS): Add import-utils.
2016-01-20import: gem: Beautify only the description, not the synopsis.Ben Woodcroft
* guix/import/gem.scm (make-gem-sexp): Add synopsis argument. (gem->guix-package): Pass unbeautified synopsis to make-gem-sexp. * tests/gem.scm: Adapt it.
2016-01-20import: Add Bioconductor importer and updater.Ricardo Wurmus
* guix/import/cran.scm (%bioconductor-updater, latest-bioconductor-release, bioconductor-package?): New procedures. (cran->guix-package): Support repositories other than CRAN. (%bioconductor-url, %bioconductor-svn-url): New variables. (description->package): Update signature to distinguish between packages from different repositories. (latest-release): Rename procedure ... (latest-cran-release): ... to this. (cran-package?): Do not assume all R packages are available on CRAN. * tests/cran.scm: Update tests. * guix/scripts/import/cran.scm: Add "--archive" option and default to CRAN. * guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater". * doc/guix.texi: Document Bioconductor importer and updater.
2016-01-19derivations: Add test in keep-going mode.Ludovic Courtès
* tests/derivations.scm ("derivation fails but keep going"): New test.
2016-01-19Merge branch 'master' into core-updatesMark H Weaver
2016-01-18derivations: Add test for #:leaked-env-vars.Ludovic Courtès
* tests/derivations.scm ("derivation #:leaked-env-vars"): New test.
2016-01-13tests: Use sed instead of grep as a package with no dependencies.Ludovic Courtès
* tests/graph.scm ("node-edges"): Choose SED instead of GREP as the example.
2016-01-06utils: Add 'ensure-keyword-arguments'.Ludovic Courtès
* guix/utils.scm (delkw, ensure-keyword-arguments): New procedures. * tests/utils.scm ("ensure-keyword-arguments"): New test.
2016-01-05guix package: Allow multiple '--search' flags.Ludovic Courtès
* guix/scripts/package.scm (find-packages-by-description): Change 'rx' parameter to 'regexps'. [matches-all?, matches-one?]: New procedures. Use them. (process-query): Collect regexps from all 'search' queries, and pass them to 'find-packages-by-description'. * tests/guix-package.sh: Add tests. * doc/guix.texi (Invoking guix package): Document it.
2016-01-02graph: %BAG-WITH-ORIGINS-NODE-TYPE includes the origin's guile.Ludovic Courtès
Before that it would include #f for most origins since that the default value of 'origin-patch-guile'. * guix/scripts/graph.scm (bag-node-edges): When 'origin-patch-guile' returns #f, use (default-guile). * tests/graph.scm ("bag DAG, including origins"): Check for an edge from O to (default-guile).
2016-01-02graph: %BAG-EMERGED-NODE-TYPE filters out origins.Ludovic Courtès
Fixes <http://bugs.gnu.org/22280>. Reported by Leo Famulari <leo@famulari.name>. * guix/scripts/graph.scm (%bag-emerged-node-type)[edges]: Mimic %BAG-NODE-TYPE. This is a followup to 38b92da.
2015-12-30guix build: Augment %PATCH-PATH when -L is passed.Ludovic Courtès
Fixes <http://bugs.gnu.org/22259>. Reported by Nikolay Merinov <nikolay.merinov@member.fsf.org>. * guix/scripts/build.scm (%standard-build-options) <-L>: Augment %PATCH-PATH. * tests/guix-package.sh: Add test.
2015-12-20profiles: Honor search paths of propagated inputs.Ludovic Courtès
Fixes <http://bugs.gnu.org/22073>. Reported by Federico Beffa <beffa@ieee.org>. * guix/profiles.scm (package->manifest-entry): Use 'package-transitive-native-search-paths' when computing 'search-paths' field. * tests/profiles.scm ("package->manifest-entry, search paths"): New test.
2015-12-20packages: Add 'package-transitive-native-search-paths'.Ludovic Courtès
* guix/packages.scm (package-transitive-native-search-paths): New procedure. * tests/packages.scm ("package-transitive-native-search-paths"): New test.
2015-12-14gexp: 'local-file' resolves relative file names.Ludovic Courtès
* guix/gexp.scm (<local-file>): Rename constructor to '%%local-file'. Add 'absolute' field. (%local-file, extract-directory, absolute-file-name): New procedures. (current-source-directory): New macro. (local-file): Adjust call to '%local-file'. (local-file-absolute-file-name): New procedure. (local-file-compiler): Force the 'absolute' field. * tests/guix-system.sh: Test whether 'local-file' canonicalization works. * doc/guix.texi (G-Expressions): Adjust.
2015-12-13graph: Add synthetic test.Ludovic Courtès
* tests/graph.scm ("node-transitive-edges, no duplicates"): New test.
2015-12-11import: cran: Parse DESCRIPTION instead of HTML.Ricardo Wurmus
* guix/import/cran.scm (description->alist, listify, beautify-description, description->package): New procedures. (table-datum, downloads->url, nodes->text, cran-sxml->sexp): Remove proceduces. (latest-release): Use parsed DESCRIPTION instead of SXML. * tests/cran.scm: Rewrite to match importer.
2015-12-09derivations: Determine what's built in 'check' mode.Ludovic Courtès
* guix/derivations.scm (substitution-oracle): Add #:mode parameter and honor it. (derivation-prerequisites-to-build): Likewise. [derivation-built?]: Take it into account. * guix/ui.scm (show-what-to-build): Add #:mode parameter. Pass it to 'substitute-oracle' and 'derivations-prerequisites-to-build'. * tests/derivations.scm ("derivation-prerequisites-to-build in 'check' mode"): New test.
2015-12-08store: Allow clients to request multiple builds.Ludovic Courtès
* guix/store.scm (set-build-options): Add #:rounds parameter and honor it. * tests/store.scm ("build multiple times"): New test.
2015-12-07gnu-maintenance: Add tests for 'release-file?'.Ludovic Courtès
* tests/gnu-maintenance.scm: New file. * Makefile.am (SCM_TESTS): Add it. * guix/gnu-maintenance.scm (release-file?): Export.
2015-12-03store: Add mode parameter to 'build-paths'.Ludovic Courtès
* guix/store.scm (%protocol-version): Set minor to 15. (build-mode): New enumerate type. (build-things): Add 'mode' parameter; pass it to the RPC. * tests/store.scm ("build-things, check mode"): New check.
2015-11-28lint: Do not report already-patched vulnerabilities.Ludovic Courtès
* guix/scripts/lint.scm (patch-file-name): New procedure. (check-vulnerabilities): Use it to filter out patched vulnerabilities. * tests/lint.scm ("cve: one patched vulnerability"): New test.
2015-11-26lint: Add "cve" checker.Ludovic Courtès
Fixes <http://bugs.gnu.org/21289>. * guix/scripts/lint.scm (package-name->cpe-name, package-vulnerabilities) (check-vulnerabilities): New procedures. * guix/scripts/lint.scm (%checkers): Add "cve" checker. * tests/lint.scm ("cve", "cve: one vulnerability"): New tests. * doc/guix.texi (Invoking guix lint): Mention it.
2015-11-26Add (guix cve).Ludovic Courtès
* guix/cve.scm, tests/cve-sample.xml, tests/cve.scm: New files. * Makefile.am (MODULES): Add guix/cve.scm. (SCM_TESTS): Add tests/cve.scm. (EXTRA_DIST): Add tests/cve-sample.scm.
2015-11-26import: hackage: Add new tests.Federico Beffa
* tests/hackage.scm (eval-test-with-cabal): Add optional argument. (test-cabal-3): New variable and test. (test-read-cabal-1): Exercise more parsing variants.
2015-11-26utils: Add 'canonical-newline-port'.Federico Beffa
* guix/utils.scm (canonical-newline-port): New procedure. * tests/utils.scm ("canonical-newline-port"): New test.
2015-11-24services: dmd: Error out upon unmet dmd requirements.Ludovic Courtès
* gnu/services/dmd.scm (assert-no-duplicates): Rename to... (assert-valid-graph): ... this. [provisions]: New variable. [assert-satisfied-requirements]: New procedure. Use it. * tests/guix-system.sh: Add test with unmet dmd requirements.
2015-11-23graph: Add '%bag-with-origins-node-type'.Ludovic Courtès
* guix/scripts/graph.scm (bag-node-edges): Remove 'filter' call. Add case for 'origin'. (%bag-node-type)[edges]: Add filtering here. (%bag-with-origins-node-type): New variable. (%node-types): Add it. * tests/graph.scm ("bag DAG, including origins"): New test. * tests/guix-graph.sh: Add 'bag-with-origins'. * doc/guix.texi (Invoking guix graph): Document it.
2015-11-23guix download: Fail when more than one URL is passed.Ludovic Courtès
* guix/scripts/download.scm (guix-download)[parse-option]: Call 'leave' when passed an extra argument. * tests/guix-download.sh: Add test.
2015-11-21environment: Correctly handle abnormal exits.Ludovic Courtès
Fixes <http://bugs.gnu.org/21958>. * guix/scripts/environment.scm (status->exit-code): New procedure. (exit/status, primitive-exit/status): Use it. * tests/guix-environment-container.sh: Add test.
2015-11-21tests: Skip 'guix-container-environment.sh' when support is missing.Ludovic Courtès
Fixes <http://bugs.gnu.org/21410>. Reported by Alex Vong <alexvong1995@gmail.com>. * tests/guix-environment-container.sh: Exit with 77 when '((@@ (guix scripts environment) assert-container-features))' fails.
2015-11-21graph: Add procedures to query a node's edges.Ludovic Courtès
* guix/graph.scm (%node-edges, node-edges, node-back-edges) (node-transitive-edges): New procedures. * tests/graph.scm ("node-edges") ("node-transitive-edges + node-back-edges"): New tests.
2015-11-21Add (guix graph).Ludovic Courtès
* guix/scripts/graph.scm (<node-type>, <graph-backend>, emit-prologue) (emit-epilogue, emit-node, emit-edge, %graphviz-backend, export-graph): Move to... * guix/graph.scm: ... here. New file. * guix/scripts/system.scm, tests/graph.scm: Use it. * Makefile.am (MODULES): Add it.
2015-11-11guix gc: Error out when extra arguments are passed.Ludovic Courtès
Fixes <http://bugs.gnu.org/21817>. Reported by Petter Berntsen <petter@mykolab.ch>. * guix/scripts/gc.scm (guix-gc)[assert-no-extra-arguments]: New procedure. Use it for actions 'collect-garbage', 'optimize', and 'verify'. * tests/guix-gc.sh: Add tests.
2015-11-11guix package: '--search-paths' can report combined search paths.Ludovic Courtès
Partly fixes <http://bugs.gnu.org/20255>. * guix/scripts/package.scm (search-path-environment-variables): Change 'profile' to 'profiles'; expect it to be a list. (display-search-paths): Likewise. (%default-options): Remove 'profile' entry. (%options) <--profile>: Keep previous values associated with 'profile' in RESULT. (guix-package)[process-actions, process-query]: Handle the possible lack of 'profile' pair in OPTS.
2015-11-04tests: Use the canonical current directory name.Ludovic Courtès
* tests/guix-environment-container.sh (current_dir): New variable. Use it when grepping "mounts".
2015-11-04tests: Skip 'program-file' test when shebang is too long.Ludovic Courtès
* tests/gexp.scm ("program-file"): Skip when SHEBANG is too long.
2015-11-03import: pypi: Use "pypi-uri" instead of building the URL manually.Cyril Roelandt
* guix/import/pypi.scm (make-pypi-sexp): Use "pypi-uri". * tests/pypi.scm: Update the tests accordingly.
2015-11-03build: container: Add feature test predicates.David Thompson
* gnu/build/linux-container.scm (user-namespace-supported?, unprivileged-user-namespace-supported?, setgroups-supported?): New procedures. * tests/container.scm: Use predicates. * tests/syscalls.scm: Likewise.
2015-11-02tests: Set 'SHELL' for 'guix environment'.Ludovic Courtès
* tests/guix-environment.sh: Export 'SHELL'.
2015-11-01tests: Make sure the daemon dumps directory entries deterministically.Ludovic Courtès
* tests/store.scm ("write-file & export-path yield the same result"): New test.
2015-10-30scripts: environment: Allow lists of packages in expressions.David Thompson
* guix/scripts/environment.scm (options/resolve-packages): Match against lists of packages when evaluating expressions. * tests/guix-environment.sh: Add test. * doc/guix.texi ("invoking guix environment"): Add docs.
2015-10-29scripts: environment: Allow mixing regular and ad-hoc packages.David Thompson
This patch changes the --ad-hoc flag to be positional. That is, the packages that appear before --ad-hoc are interpreted as packages whose inputs should be in the environment; the packages that appear after are interpreted as packages to be directly added to the environment. * guix/scripts/environment.scm (tag-package-arg, compact): New procedures. (%options): Tweak the handlers for --load and --expression options. (options/resolve-packages): Preserve package mode tag. (parse-args): Tweak argument handler to use package tagging procedure. (guix-environment): Apply ad-hoc behavior on a per package basis. * tests/guix-environment.sh: Add test. * doc/guix.texi ("invoking guix environment"): Document new behavior of --ad-hoc.
2015-10-28tests: Print the mounts visible in the container.Ludovic Courtès
* tests/guix-environment-container.sh: Print the content of $tmpdir/mounts.
2015-10-28scripts: build: Add --file option.David Thompson
* guix/scripts/build.scm (show-help): Add help text for --file option. (%options): Add --file option. (options/resolve-packages): Handle 'file' options. * tests/guix-build.sh: Add tests. * doc/guix.texi ("invoking guix build"): Add doc.
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