From f0f839c1240d8d42bab6351ab463d0ca38985e2f Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Sat, 5 Jun 2021 08:49:39 +0200 Subject: gnu: r-deepsnv: Update to 1.38.0. * gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.38.0. [inputs]: Remove zlib. [native-inputs]: Add r-knitr. --- gnu/packages/bioconductor.scm | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 34df07c977..a7b4aded61 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1442,17 +1442,15 @@ biological sequences.") (define-public r-deepsnv (package (name "r-deepsnv") - (version "1.36.0") + (version "1.38.0") (source (origin (method url-fetch) (uri (bioconductor-uri "deepSNV" version)) (sha256 (base32 - "1lbvx9liql8fkb4y020kwpgp61vzg67cy640dc4kybglcw9dx6j0")))) + "0zz56hf417m7bgg2g2wpbaik30pi6h2nam1n5bviqgdn4mv8n0bs")))) (properties `((upstream-name . "deepSNV"))) (build-system r-build-system) - (inputs - `(("zlib" ,zlib))) (propagated-inputs `(("r-biostrings" ,r-biostrings) ("r-genomicranges" ,r-genomicranges) @@ -1461,6 +1459,8 @@ biological sequences.") ("r-summarizedexperiment" ,r-summarizedexperiment) ("r-variantannotation" ,r-variantannotation) ("r-vgam" ,r-vgam))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://github.com/gerstung-lab/deepSNV/") (synopsis "Detection of subclonal SNVs in deep sequencing data") (description -- cgit v1.2.3