From a436582124a4e4d1e075bb8ba5eb6a18fbfd8145 Mon Sep 17 00:00:00 2001 From: Mădălin Ionel Patrașcu Date: Tue, 12 Apr 2022 18:15:09 +0200 Subject: gnu: Add r-abarray. * gnu/packages/bioconductor.scm (r-abarray): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++ 1 file changed, 26 insertions(+) (limited to 'gnu/packages/bioconductor.scm') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 6559e69711..69ffdbe79b 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1102,6 +1102,32 @@ datasets which are derived from the Allen Brain Atlas: All datasets are restricted to protein coding genes.") (license license:gpl2+))) +(define-public r-abarray + (package + (name "r-abarray") + (version "1.62.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "ABarray" version)) + (sha256 + (base32 + "0yh7jmkwdg3kmm98ii0cxbla3s5bwy84fpg6xcpggsrriwzwfb5k")))) + (properties `((upstream-name . "ABarray"))) + (build-system r-build-system) + (propagated-inputs (list r-biobase r-multtest)) + (home-page "https://bioconductor.org/packages/ABarray") + (synopsis + "Gene expression analysis for Applied Biosystems Genome Survey Microarray") + (description + "The package @code{ABarray} is designed to work with Applied Biosystems +whole genome microarray platform, as well as any other platform whose data can +be transformed into expression data matrix. Functions include data +preprocessing, filtering, control probe analysis, statistical analysis in one +single function. A @dfn{graphical user interface} (GUI) is also provided. The +raw data, processed data, graphics output and statistical results are organized +into folders according to the analysis settings used.") + (license license:gpl2+))) + (define-public r-aneufinderdata (package (name "r-aneufinderdata") -- cgit v1.2.3