From 71804546b182b8300334df6fb23d207d5e5ba61c Mon Sep 17 00:00:00 2001 From: Brian Leung Date: Tue, 25 Jun 2019 20:50:54 +0200 Subject: gnu: python-scikit-learn: Make gzip timestamps writable. * gnu/packages/machine-learning.scm (python-scikit-learn) [arguments]: Add custom phase to make gzip timestamps writable. Signed-off-by: Efraim Flashner --- gnu/packages/machine-learning.scm | 10 ++++++++-- 1 file changed, 8 insertions(+), 2 deletions(-) (limited to 'gnu/packages/machine-learning.scm') diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 2dc7dc81ef..dd5ee1e9ee 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -821,8 +821,14 @@ computing environments.") (setenv "HOME" "/tmp") (invoke "pytest" "sklearn" "-m" "not network"))) - ;; FIXME: This fails with permission denied - (delete 'reset-gzip-timestamps)))) + (add-before 'reset-gzip-timestamps 'make-files-writable + (lambda* (#:key outputs #:allow-other-keys) + ;; Make sure .gz files are writable so that the + ;; 'reset-gzip-timestamps' phase can do its work. + (let ((out (assoc-ref outputs "out"))) + (for-each make-file-writable + (find-files out "\\.gz$")) + #t)))))) (inputs `(("openblas" ,openblas))) (native-inputs -- cgit v1.2.3 From e3a699380ecb5da8008e398ea39528e7661f511f Mon Sep 17 00:00:00 2001 From: Efraim Flashner Date: Wed, 7 Aug 2019 19:34:11 +0300 Subject: gnu: ghmm: Update source file-name field. * gnu/packages/machine-learning.scm (ghmm)[source]: Change 'file-name field to include '-checkout' string. --- gnu/packages/machine-learning.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'gnu/packages/machine-learning.scm') diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index dd5ee1e9ee..5ab0e6adb3 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -193,7 +193,7 @@ classification.") (uri (svn-reference (url "http://svn.code.sf.net/p/ghmm/code/trunk") (revision svn-revision))) - (file-name (string-append name "-" version)) + (file-name (string-append name "-" version "-checkout")) (sha256 (base32 "0qbq1rqp94l530f043qzp8aw5lj7dng9wq0miffd7spd1ff638wq")))) -- cgit v1.2.3 From a491856f2ac1d9c54536b21723fa5f0fc19d71b1 Mon Sep 17 00:00:00 2001 From: Efraim Flashner Date: Wed, 7 Aug 2019 19:34:40 +0300 Subject: gnu: ghmm: Remove extra build phase. * gnu/packages/machine-learning.scm (ghmm)[arguments]: Remove unneeded 'autogen phase. --- gnu/packages/machine-learning.scm | 5 +---- 1 file changed, 1 insertion(+), 4 deletions(-) (limited to 'gnu/packages/machine-learning.scm') diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm index 5ab0e6adb3..e48c91a2cf 100644 --- a/gnu/packages/machine-learning.scm +++ b/gnu/packages/machine-learning.scm @@ -251,10 +251,7 @@ classification.") (string-append indent "@unittest.skip(\"Disabled by Guix\")\n" line))) - #t)) - (add-after 'disable-broken-tests 'autogen - (lambda _ - (invoke "bash" "autogen.sh")))))) + #t))))) (inputs `(("python" ,python-2) ; only Python 2 is supported ("libxml2" ,libxml2))) -- cgit v1.2.3