From 877ab0266c69858a9d4554dffba89dc5300a0736 Mon Sep 17 00:00:00 2001 From: Efraim Flashner Date: Mon, 1 Feb 2021 18:18:42 +0200 Subject: gnu: vcflib: Fix generated pkg-config file. * gnu/packages/bioinformatics.scm (vcflib)[arguments]: In custom generated pkg-config file, link with all needed libraries and fix linker library. * gnu/packages/patches/freebayes-devendor-deps.patch: Adjust accordingly. --- gnu/packages/patches/freebayes-devendor-deps.patch | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) (limited to 'gnu/packages/patches') diff --git a/gnu/packages/patches/freebayes-devendor-deps.patch b/gnu/packages/patches/freebayes-devendor-deps.patch index 7e84666b85..9886de11fb 100644 --- a/gnu/packages/patches/freebayes-devendor-deps.patch +++ b/gnu/packages/patches/freebayes-devendor-deps.patch @@ -23,7 +23,7 @@ index f6bf242..bded4af 100644 +tabixpp_dep = dependency('tabixpp', required : false) +fastahack_dep = dependency('fastahack', required : false) +smithwaterman_dep = dependency('smithwaterman', required : false) -+vcflib_dep = dependency('libvcflib', required: false) ++vcflib_dep = dependency('vcflib', required: false) thread_dep = dependency('threads') if htslib_dep.found() -- cgit v1.2.3