From 8394619baceb118df92e355377fd543bb1aa501a Mon Sep 17 00:00:00 2001
From: Ludovic Courtès <ludo@gnu.org>
Date: Mon, 13 Dec 2021 17:18:24 +0100
Subject: gnu: Simplify package inputs.

This commit was obtained by running:

  ./pre-inst-env guix style

without any additional argument.
---
 gnu/packages/python-science.scm | 278 ++++++++++++++++++----------------------
 1 file changed, 127 insertions(+), 151 deletions(-)

(limited to 'gnu/packages/python-science.scm')

diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index eb1f8312cd..d23c56daa6 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -75,20 +75,17 @@
         (base32 "0rh5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb"))))
     (build-system python-build-system)
     (propagated-inputs
-     `(("python-numpy" ,python-numpy)
-       ("python-matplotlib" ,python-matplotlib)
-       ("python-pyparsing" ,python-pyparsing)))
+     (list python-numpy python-matplotlib python-pyparsing))
     (inputs
-     `(("openblas" ,openblas)
-       ("pybind11" ,pybind11)))
+     (list openblas pybind11))
     (native-inputs
-     `(("python-cython" ,python-cython)
-       ("python-pytest" ,python-pytest)
-       ("python-sphinx" ,python-sphinx)
-       ("python-numpydoc" ,python-numpydoc)
-       ("gfortran" ,gfortran)
-       ("perl" ,perl)
-       ("which" ,which)))
+     (list python-cython
+           python-pytest
+           python-sphinx
+           python-numpydoc
+           gfortran
+           perl
+           which))
     (outputs '("out" "doc"))
     (arguments
      `(#:phases
@@ -188,14 +185,14 @@ routines such as routines for numerical integration and optimization.")
         (base32
          "1cgvgin8fvckv96hjh3ikmwkra5rif51bdb75ifzf7xbil5iwcx4"))))
     (native-inputs
-     `(("python-cython" ,python2-cython)
-       ("python-pytest" ,python2-pytest)
-       ("python-sphinx" ,python2-sphinx)
-       ("python-numpydoc" ,python2-numpydoc)
-       ("gfortran" ,gfortran-7)
-       ("gcc" ,gcc-7)
-       ("perl" ,perl)
-       ("which" ,which)))))
+     (list python2-cython
+           python2-pytest
+           python2-sphinx
+           python2-numpydoc
+           gfortran-7
+           gcc-7
+           perl
+           which))))
 
 (define-public python2-weave
   (package
@@ -218,9 +215,9 @@ routines such as routines for numerical integration and optimization.")
                      "--exclude"
                      "test_(user|incorrect_ownership|char_fail|obj_fail)"))))))
     (propagated-inputs
-     `(("python-numpy" ,python2-numpy)))
+     (list python2-numpy))
     (native-inputs
-     `(("python-nose" ,python2-nose)))
+     (list python2-nose))
     (home-page "https://www.scipy.org/")
     (synopsis "Tools for including C/C++ code within Python code")
     (description "Weave is the stand-alone version of the obsolete Scipy
@@ -249,11 +246,9 @@ Cython.")
              (invoke "nosetests" "-s" "-v" "skfuzzy")
              #t)))))
     (native-inputs
-     `(("python-nose" ,python-nose)))
+     (list python-nose))
     (propagated-inputs
-     `(("python-networkx" ,python-networkx)
-       ("python-numpy" ,python-numpy)
-       ("python-scipy" ,python-scipy)))
+     (list python-networkx python-numpy python-scipy))
     (home-page "https://github.com/scikit-fuzzy/scikit-fuzzy")
     (synopsis "Fuzzy logic toolkit for SciPy")
     (description
@@ -293,24 +288,24 @@ logic, also known as grey logic.")
     ;; NOTE: scikit-image has an optional dependency on python-pooch, however
     ;; propagating it would enable many more tests that require online data.
     (propagated-inputs
-     `(("python-cloudpickle" ,python-cloudpickle)
-       ("python-dask" ,python-dask)
-       ("python-imageio" ,python-imageio)
-       ("python-matplotlib" ,python-matplotlib)
-       ("python-networkx" ,python-networkx)
-       ("python-numpy" ,python-numpy)
-       ("python-pillow" ,python-pillow)
-       ("python-pywavelets" ,python-pywavelets)
-       ("python-scipy" ,python-scipy)
-       ("python-tifffile" ,python-tifffile)))
+     (list python-cloudpickle
+           python-dask
+           python-imageio
+           python-matplotlib
+           python-networkx
+           python-numpy
+           python-pillow
+           python-pywavelets
+           python-scipy
+           python-tifffile))
     (native-inputs
-     `(("python-codecov" ,python-codecov)
-       ("python-cython" ,python-cython)
-       ("python-flake8" ,python-flake8)
-       ("python-pytest" ,python-pytest)
-       ("python-pytest-cov" ,python-pytest-cov)
-       ("python-pytest-localserver" ,python-pytest-localserver)
-       ("python-wheel" ,python-wheel)))
+     (list python-codecov
+           python-cython
+           python-flake8
+           python-pytest
+           python-pytest-cov
+           python-pytest-localserver
+           python-wheel))
     (home-page "https://scikit-image.org/")
     (synopsis "Image processing in Python")
     (description
@@ -329,7 +324,7 @@ logic, also known as grey logic.")
         (base32 "0dncp9i5b6afkg7f8mj9j0qzsp008b8v73yc0qkmizhpns7mvwvx"))))
     (build-system python-build-system)
     (propagated-inputs
-     `(("python-numpy" ,python-numpy)))
+     (list python-numpy))
     (home-page "https://github.com/brandon-rhodes/python-sgp4")
     (synopsis "Track earth satellite TLE orbits using SGP4")
     (description
@@ -394,26 +389,24 @@ of the SGP4 satellite tracking algorithm.")
                                           " and not TestS3"
                                           " and not s3"))))))))))
     (propagated-inputs
-     `(("python-jinja2" ,python-jinja2)
-       ("python-numpy" ,python-numpy)
-       ("python-openpyxl" ,python-openpyxl)
-       ("python-pytz" ,python-pytz)
-       ("python-dateutil" ,python-dateutil)
-       ("python-xlrd" ,python-xlrd)))
+     (list python-jinja2
+           python-numpy
+           python-openpyxl
+           python-pytz
+           python-dateutil
+           python-xlrd))
     (inputs
-     `(("which" ,which)
-       ("xclip" ,xclip)
-       ("xsel" ,xsel)))
+     (list which xclip xsel))
     (native-inputs
-     `(("python-cython" ,python-cython)
-       ("python-beautifulsoup4" ,python-beautifulsoup4)
-       ("python-lxml" ,python-lxml)
-       ("python-html5lib" ,python-html5lib)
-       ("python-nose" ,python-nose)
-       ("python-pytest" ,python-pytest)
-       ("python-pytest-mock" ,python-pytest-mock)
-       ;; Needed to test clipboard support.
-       ("xorg-server" ,xorg-server-for-tests)))
+     (list python-cython
+           python-beautifulsoup4
+           python-lxml
+           python-html5lib
+           python-nose
+           python-pytest
+           python-pytest-mock
+           ;; Needed to test clipboard support.
+           xorg-server-for-tests))
     (home-page "https://pandas.pydata.org")
     (synopsis "Data structures for data analysis, time series, and statistics")
     (description
@@ -508,21 +501,18 @@ doing practical, real world data analysis in Python.")
                            ;; XXX: Due to the deleted tests above.
                            "not test_read_s3_jsonl"))))))))
       (propagated-inputs
-       `(("python-numpy" ,python2-numpy)
-         ("python-openpyxl" ,python2-openpyxl)
-         ("python-pytz" ,python2-pytz)
-         ("python-dateutil" ,python2-dateutil)
-         ("python-xlrd" ,python2-xlrd)))
+       (list python2-numpy python2-openpyxl python2-pytz python2-dateutil
+             python2-xlrd))
       (inputs
-       `(("which" ,which)))
+       (list which))
       (native-inputs
-       `(("python-cython" ,python2-cython)
-         ("python-beautifulsoup4" ,python2-beautifulsoup4)
-         ("python-lxml" ,python2-lxml)
-         ("python-html5lib" ,python2-html5lib)
-         ("python-nose" ,python2-nose)
-         ("python-pytest" ,python2-pytest)
-         ("python-pytest-mock" ,python2-pytest-mock))))))
+       (list python2-cython
+             python2-beautifulsoup4
+             python2-lxml
+             python2-html5lib
+             python2-nose
+             python2-pytest
+             python2-pytest-mock)))))
 
 (define-public python-pyflow
   (package
@@ -563,11 +553,9 @@ context of a task dependency graph.  It has some similarities to make.")
            (lambda _
              (invoke "python" "setup.py" "pytest"))))))
     (native-inputs
-     `(("python-hypothesis" ,python-hypothesis)
-       ("python-pytest" ,python-pytest)
-       ("python-pytest-runner" ,python-pytest-runner)))
+     (list python-hypothesis python-pytest python-pytest-runner))
     (propagated-inputs
-     `(("python-numpy" ,python-numpy)))
+     (list python-numpy))
     (home-page "https://github.com/pydata/bottleneck")
     (synopsis "Fast NumPy array functions written in C")
     (description
@@ -587,9 +575,7 @@ written in C.")
         (base32 "1c1354a7b3g8slychjgyjxqdm8z40z9kviyl9n4g9kfpdg0p4d64"))))
     (build-system python-build-system)
     (propagated-inputs
-     `(("python-matplotlib" ,python-matplotlib)
-       ("python-numpy" ,python-numpy)
-       ("python-scipy" ,python-scipy)))
+     (list python-matplotlib python-numpy python-scipy))
     (home-page "https://github.com/janezd/baycomp")
     (synopsis "Library for comparison of Bayesian classifiers")
     (description
@@ -613,11 +599,9 @@ higher scores.")
                 "1yx8j66b7rn10m2l6gmn8yr9cn38pi5cj0x0wwpy4hdnhy6i7qv4"))))
     (build-system python-build-system)
     (native-inputs
-     `(("python-setuptools-scm" ,python-setuptools-scm)
-       ("python-pytest" ,python-pytest)))
+     (list python-setuptools-scm python-pytest))
     (propagated-inputs
-     `(("python-numpy" ,python-numpy)
-       ("python-pandas" ,python-pandas)))
+     (list python-numpy python-pandas))
     (arguments
      `(#:phases
        (modify-phases %standard-phases
@@ -649,8 +633,7 @@ and visualization with these data structures.")
          "0syzy645mwcy7lfjwz6pc8f9p2vv1qk4limc8iina3l5nnf0rjyz"))))
     (build-system python-build-system)
     (propagated-inputs
-     `(("python-msgpack" ,python-msgpack)
-       ("python-numpy" ,python-numpy)))
+     (list python-msgpack python-numpy))
     (home-page "https://github.com/lebedov/msgpack-numpy")
     (synopsis
      "Numpy data serialization using msgpack")
@@ -684,7 +667,7 @@ Python's native complex data types is also supported.")
                (with-directory-excursion "ruffus/test"
                  (invoke "bash" "run_all_unit_tests3.cmd"))))))))
     (native-inputs
-     `(("python-pytest" ,python-pytest)))
+     (list python-pytest))
     (home-page "http://www.ruffus.org.uk")
     (synopsis "Light-weight computational pipeline management")
     (description
@@ -705,11 +688,8 @@ automated with the minimum of fuss and the least effort.")
          "1f8c2sylzr7lpjbyqxsqlp9xi8rj3d8c9hfh98x4jbb83zxc4026"))))
     (build-system python-build-system)
     (propagated-inputs
-     `(("python-numpy" ,python-numpy)
-       ("python-seaborn" ,python-seaborn)
-       ("python-matplotlib" ,python-matplotlib)
-       ("python-pandas" ,python-pandas)
-       ("python-scipy" ,python-scipy)))
+     (list python-numpy python-seaborn python-matplotlib python-pandas
+           python-scipy))
     (home-page
      "https://github.com/webermarcolivier/statannot")
     (synopsis "Add annotations to existing plots generated by seaborn")
@@ -742,11 +722,9 @@ annotations on an existing boxplots and barplots generated by seaborn.")
              (add-installed-pythonpath inputs outputs)
              (invoke "pytest" "-v" "--doctest-modules"))))))
     (propagated-inputs
-     `(("python-matplotlib" ,python-matplotlib)
-       ("python-pandas" ,python-pandas)))
+     (list python-matplotlib python-pandas))
     (native-inputs
-     `(("python-pytest-runner" ,python-pytest-runner)
-       ("python-pytest-cov" ,python-pytest-cov)))
+     (list python-pytest-runner python-pytest-cov))
     (home-page "https://upsetplot.readthedocs.io")
     (synopsis "Draw UpSet plots with Pandas and Matplotlib")
     (description
@@ -790,7 +768,7 @@ readable.")
        ("pkgconfig" ,python-pkgconfig)
        ("matplotlib" ,python-matplotlib)))
     (native-inputs ; for python-pkgconfig
-     `(("pkg-config" ,pkg-config)))
+     (list pkg-config))
     (propagated-inputs
      `(("numpy" ,python-numpy)
        ("vtk" ,vtk)))
@@ -826,8 +804,7 @@ dependencies.")
          "12g4av8gpl6l83yza3h97j3f2jblqv69frlidrvdq8ny2rc6awbq"))))
     (build-system python-build-system)
     (propagated-inputs
-     `(("python-pandas" ,python-pandas)
-       ("python-xarray" ,python-xarray)))
+     (list python-pandas python-xarray))
     (home-page "https://github.com/Zsailer/pandas_flavor")
     (synopsis "Write your own flavor of Pandas")
     (description "Pandas 0.23 added a simple API for registering accessors
@@ -874,19 +851,18 @@ of Pandas
              (when tests?
                (invoke "pytest")))))))
     (native-inputs
-     `(("python-pytest" ,python-pytest)
-       ("python-pytest-cov" ,python-pytest-cov)))
+     (list python-pytest python-pytest-cov))
     (propagated-inputs
-     `(("python-matplotlib" ,python-matplotlib)
-       ("python-mpmath" ,python-mpmath)
-       ("python-numpy" ,python-numpy)
-       ("python-pandas" ,python-pandas)
-       ("python-pandas-flavor" ,python-pandas-flavor)
-       ("python-scikit-learn" ,python-scikit-learn)
-       ("python-scipy" ,python-scipy)
-       ("python-seaborn" ,python-seaborn)
-       ("python-statsmodels" ,python-statsmodels)
-       ("python-tabulate" ,python-tabulate)))
+     (list python-matplotlib
+           python-mpmath
+           python-numpy
+           python-pandas
+           python-pandas-flavor
+           python-scikit-learn
+           python-scipy
+           python-seaborn
+           python-statsmodels
+           python-tabulate))
     (home-page "https://pingouin-stats.org/")
     (synopsis "Statistical package for Python")
     (description "Pingouin is a statistical package written in Python 3 and
@@ -964,21 +940,21 @@ and more
                         ;; "AttributeError: module 'distributed.dashboard' has no attribute 'scheduler'"
                         " and not test_get_client_functions_spawn_clusters"))))))))
     (propagated-inputs
-     `(("python-click" ,python-click)
-       ("python-cloudpickle" ,python-cloudpickle)
-       ("python-cryptography" ,python-cryptography)
-       ("python-dask" ,python-dask)
-       ("python-msgpack" ,python-msgpack)
-       ("python-psutil" ,python-psutil)
-       ("python-pyyaml" ,python-pyyaml)
-       ("python-setuptools" ,python-setuptools)
-       ("python-sortedcontainers" ,python-sortedcontainers)
-       ("python-tblib" ,python-tblib)
-       ("python-toolz" ,python-toolz)
-       ("python-tornado" ,python-tornado-6)
-       ("python-zict" ,python-zict)))
+     (list python-click
+           python-cloudpickle
+           python-cryptography
+           python-dask
+           python-msgpack
+           python-psutil
+           python-pyyaml
+           python-setuptools
+           python-sortedcontainers
+           python-tblib
+           python-toolz
+           python-tornado-6
+           python-zict))
     (native-inputs
-     `(("python-pytest" ,python-pytest)))
+     (list python-pytest))
     (home-page "https://distributed.dask.org")
     (synopsis "Distributed scheduler for Dask")
     (description "Dask.distributed is a lightweight library for distributed
@@ -1018,31 +994,31 @@ computing in Python.  It extends both the @code{concurrent.futures} and
                (invoke "python" "-m" "pytest"
                        "modin/pandas/test/test_concat.py")))))))
     (propagated-inputs
-     `(("python-cloudpickle" ,python-cloudpickle)
-       ("python-dask" ,python-dask)
-       ("python-distributed" ,python-distributed)
-       ("python-numpy" ,python-numpy)
-       ("python-packaging" ,python-packaging)
-       ("python-pandas" ,python-pandas)))
+     (list python-cloudpickle
+           python-dask
+           python-distributed
+           python-numpy
+           python-packaging
+           python-pandas))
     (native-inputs
-     `(("python-coverage" ,python-coverage)
-       ("python-jinja2" ,python-jinja2)
-       ("python-lxml" ,python-lxml)
-       ("python-matplotlib" ,python-matplotlib)
-       ("python-msgpack" ,python-msgpack)
-       ("python-openpyxl" ,python-openpyxl)
-       ("python-psutil" ,python-psutil)
-       ("python-pyarrow" ,python-pyarrow)
-       ("python-pytest" ,python-pytest)
-       ("python-pytest-benchmark" ,python-pytest-benchmark)
-       ("python-pytest-cov" ,python-pytest-cov)
-       ("python-pytest-xdist" ,python-pytest-xdist)
-       ("python-scipy" ,python-scipy)
-       ("python-sqlalchemy" ,python-sqlalchemy)
-       ("python-tables" ,python-tables)
-       ("python-tqdm" ,python-tqdm)
-       ("python-xarray" ,python-xarray)
-       ("python-xlrd" ,python-xlrd)))
+     (list python-coverage
+           python-jinja2
+           python-lxml
+           python-matplotlib
+           python-msgpack
+           python-openpyxl
+           python-psutil
+           python-pyarrow
+           python-pytest
+           python-pytest-benchmark
+           python-pytest-cov
+           python-pytest-xdist
+           python-scipy
+           python-sqlalchemy
+           python-tables
+           python-tqdm
+           python-xarray
+           python-xlrd))
     (home-page "https://github.com/modin-project/modin")
     (synopsis "Make your pandas code run faster")
     (description
-- 
cgit v1.2.3