From 655c4bb25cfb1fa02ad1378e9d0dc2cfb2b3a03c Mon Sep 17 00:00:00 2001 From: Peter Lo Date: Fri, 11 Sep 2020 21:01:30 +0200 Subject: gnu: Add r-interval. * gnu/packages/bioconductor.scm (r-interval): New variable. Signed-off-by: Ricardo Wurmus --- gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++ 1 file changed, 27 insertions(+) (limited to 'gnu/packages') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 5fb360995c..9f770b3d9a 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -8177,3 +8177,30 @@ hypothesis @code{K=1}.") @dfn{nonparametric maximum likelihood estimator} (NPMLE) for censored and truncated data.") (license license:artistic2.0))) + +;; This is a CRAN package but it depends on r-icens, which is published on +;; Bioconductor. +(define-public r-interval + (package + (name "r-interval") + (version "1.1-0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "interval" version)) + (sha256 + (base32 + "1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8")))) + (properties `((upstream-name . "interval"))) + (build-system r-build-system) + (propagated-inputs + `(("r-icens" ,r-icens) + ("r-mlecens" ,r-mlecens) + ("r-perm" ,r-perm) + ("r-survival" ,r-survival))) + (home-page "https://cran.r-project.org/web/packages/interval/") + (synopsis "Weighted Logrank tests and NPMLE for interval censored data") + (description + "This package provides functions to fit nonparametric survival curves, +plot them, and perform logrank or Wilcoxon type tests.") + (license license:gpl2+))) -- cgit v1.2.3