From bb118f20fe6581a4acbd3799ed31ab0d21e72e78 Mon Sep 17 00:00:00 2001 From: zimoun Date: Fri, 21 May 2021 22:25:48 +0200 Subject: gnu: r-aroma-light: Move to (gnu packages bioconductor). * gnu/packages/bioinformatics.scm (r-aroma-light): Move from here... * gnu/packages/bioconductor.scm (r-aroma-light): ...to here. --- gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++ gnu/packages/bioinformatics.scm | 27 --------------------------- 2 files changed, 27 insertions(+), 27 deletions(-) (limited to 'gnu/packages') diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 8fc035b623..3f057a3a4d 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1987,6 +1987,33 @@ annotation data packages using SQLite data storage.") databases. Packages produced are intended to be used with AnnotationDbi.") (license license:artistic2.0))) +(define-public r-aroma-light + (package + (name "r-aroma-light") + (version "3.20.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "aroma.light" version)) + (sha256 + (base32 + "0pi37rlfqh24p9wd7l1xb3f7c7938xdscgcc5agp8c9qhajq25a0")))) + (properties `((upstream-name . "aroma.light"))) + (build-system r-build-system) + (propagated-inputs + `(("r-matrixstats" ,r-matrixstats) + ("r-r-methodss3" ,r-r-methodss3) + ("r-r-oo" ,r-r-oo) + ("r-r-utils" ,r-r-utils))) + (home-page "https://github.com/HenrikBengtsson/aroma.light") + (synopsis "Methods for normalization and visualization of microarray data") + (description + "This package provides methods for microarray analysis that take basic +data types such as matrices and lists of vectors. These methods can be used +standalone, be utilized in other packages, or be wrapped up in higher-level +classes.") + (license license:gpl2+))) + (define-public r-biobase (package (name "r-biobase") diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index f6ec7e32c4..687da8086e 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -9196,33 +9196,6 @@ their variance is independent of the mean, and they are usually more sensitive and specific in detecting differential transcription.") (license license:artistic2.0))) -(define-public r-aroma-light - (package - (name "r-aroma-light") - (version "3.20.0") - (source - (origin - (method url-fetch) - (uri (bioconductor-uri "aroma.light" version)) - (sha256 - (base32 - "0pi37rlfqh24p9wd7l1xb3f7c7938xdscgcc5agp8c9qhajq25a0")))) - (properties `((upstream-name . "aroma.light"))) - (build-system r-build-system) - (propagated-inputs - `(("r-matrixstats" ,r-matrixstats) - ("r-r-methodss3" ,r-r-methodss3) - ("r-r-oo" ,r-r-oo) - ("r-r-utils" ,r-r-utils))) - (home-page "https://github.com/HenrikBengtsson/aroma.light") - (synopsis "Methods for normalization and visualization of microarray data") - (description - "This package provides methods for microarray analysis that take basic -data types such as matrices and lists of vectors. These methods can be used -standalone, be utilized in other packages, or be wrapped up in higher-level -classes.") - (license license:gpl2+))) - (define-public r-deseq (package (name "r-deseq") -- cgit v1.2.3