From ee676283e2dbd38bf40ef21ccd4e7493baa2ad6d Mon Sep 17 00:00:00 2001 From: Mădălin Ionel Patrașcu Date: Mon, 22 Aug 2022 14:14:40 +0200 Subject: gnu: Add r-rvenn. * gnu/packages/cran.scm (r-rvenn): New variable. --- gnu/packages/cran.scm | 36 ++++++++++++++++++++++++++++++++++++ 1 file changed, 36 insertions(+) (limited to 'gnu/packages') diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 3d1fcc928d..20fa3a930d 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -749,6 +749,42 @@ similar rank-based tests for equal probability distributions due to Neuhauser WebAssembly engine.") (license license:expat))) +(define-public r-rvenn + (package + (name "r-rvenn") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "RVenn" version)) + (sha256 + (base32 + "016m00xv59lkwm2is32v5nr4lw5a1ymdnz34r3ffflcv9bfrc6n4")))) + (properties `((upstream-name . "RVenn"))) + (build-system r-build-system) + (propagated-inputs + (list r-ggforce + r-ggplot2 + r-magrittr + r-pheatmap + r-purrr + r-rlang + r-vegan)) + (native-inputs (list r-knitr)) + (home-page "https://cran.r-project.org/package=RVenn") + (synopsis "Set operations for many sets") + (description + "The base functions for set operations in @code{R} can be used for only two +sets. This package @code{RVenn} provides functions for dealing with multiple sets. +It uses @code{purr} to find the union, intersection and difference of three or +more sets. This package also provides functions for pairwise set operations among +several sets. Further, based on @code{ggplot2} and @code{ggforce}, a Venn diagram +can be drawn for two or three sets. For bigger data sets, a clustered heatmap +showing the presence or absence of the elements of the sets can be drawn based on +the @code{pheatmap} package. Finally, enrichment test can be applied to two sets +whether an overlap is statistically significant or not.") + (license license:gpl3))) + (define-public r-dot (package (name "r-dot") -- cgit v1.2.3