diff options
| author | Afkhami, Navid <Navid.Afkhami@mdc-berlin.de> | 2023-10-13 12:12:09 +0000 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-10-13 14:42:16 +0200 |
| commit | 21b44bbc7c7b36eaaf19eb2f92ce654a44b70302 (patch) | |
| tree | 29fc0502fe96efd249ee39dc8d761bdab9d18662 | |
| parent | 4ec6fd7817ec4073547fd71309374a293d7c436c (diff) | |
gnu: Add r-mafh5-gnomad-v3-1-2-grch38.
* gnu/packages/bioconductor.scm (r-mafh5-gnomad-v3-1-2-grch38): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
| -rw-r--r-- | gnu/packages/bioconductor.scm | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index f6946b72c8..d3ff0b1127 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -68,6 +68,36 @@ ;;; Annotations +(define-public r-mafh5-gnomad-v3-1-2-grch38 + (package + (name "r-mafh5-gnomad-v3-1-2-grch38") + (version "3.15.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "MafH5.gnomAD.v3.1.2.GRCh38" version + 'annotation)) + (sha256 + (base32 "18hzw7f41ii16qpm3ch516b773900l1m1id5z6a763m01fg0mhiq")))) + (properties `((upstream-name . "MafH5.gnomAD.v3.1.2.GRCh38"))) + (build-system r-build-system) + (propagated-inputs (list r-bsgenome + r-genomeinfodb + r-genomicranges + r-genomicscores + r-hdf5array + r-iranges + r-rhdf5 + r-s4vectors)) + (home-page "https://bioconductor.org/packages/MafH5.gnomAD.v3.1.2.GRCh38") + (synopsis + "Minor allele frequency data from gnomAD version 3.1.2 for GRCh38") + (description + "This package is designed to store minor allele frequency data. +It retrieves this data from the Genome Aggregation Database +(@code{gnomAD} version 3.1.2) for the human genome version GRCh38.") + (license license:artistic2.0))) + (define-public r-org-eck12-eg-db (package (name "r-org-eck12-eg-db") |