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author | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 10:29:25 +0100 |
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committer | Ricardo Wurmus <rekado@elephly.net> | 2019-03-06 10:29:25 +0100 |
commit | 3dad6087beaef0ff5343858f26b0c1ec7e328c16 (patch) | |
tree | f0fa96cceacb7780ea9dfaca32ca19b90a716a4d /gnu/packages/bioconductor.scm | |
parent | 43d6776ba42e8542358a48bc80749d50b9d34bb7 (diff) |
gnu: Add r-org-dr-eg-db.
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r-- | gnu/packages/bioconductor.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ae9d7070c3..ed950d5687 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -170,6 +170,32 @@ Repeats Finder (TRF mask). Only the AGAPS and AMB masks are \"active\" by default." ) (license license:artistic2.0))) +(define-public r-org-dr-eg-db + (package + (name "r-org-dr-eg-db") + (version "3.7.0") + (source (origin + (method url-fetch) + ;; We cannot use bioconductor-uri here because this tarball is + ;; located under "data/annotation/" instead of "bioc/". + (uri (string-append "https://www.bioconductor.org/packages/" + "release/data/annotation/src/contrib/" + "org.Dr.eg.db_" version ".tar.gz")) + (sha256 + (base32 + "1xs5wsbcpy0iwbjyiv7fax57djqc529ai5fk1qfsdcvlja3cpglx")))) + (properties + `((upstream-name . "org.Dr.eg.db"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotationdbi" ,r-annotationdbi))) + (home-page "https://www.bioconductor.org/packages/org.Dr.eg.db/") + (synopsis "Annotation for Zebrafish") + (description + "This package provides genome wide annotations for Zebrafish, primarily +based on mapping using Entrez Gene identifiers.") + (license license:artistic2.0))) + (define-public r-genelendatabase (package (name "r-genelendatabase") |