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authorRicardo Wurmus <rekado@elephly.net>2019-03-06 21:25:18 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-03-06 21:25:18 +0100
commit5acb9052cf7f57aecebfa1e719022efad52322b0 (patch)
treec66303cb6ddafd0c22d7e732d59a1f9fbb444094 /gnu/packages/bioinformatics.scm
parentfe0b76e2159589227c2b4354897d69234a1192dc (diff)
gnu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm31
1 files changed, 0 insertions, 31 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 67eee4024e..51bb3bb9b7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8105,37 +8105,6 @@ plots the corresponding sequence logo as introduced by Schneider and
Stephens (1990).")
(license license:lgpl2.0+)))
-(define-public r-bsgenome-mmusculus-ucsc-mm9
- (package
- (name "r-bsgenome-mmusculus-ucsc-mm9")
- (version "1.4.0")
- (source (origin
- (method url-fetch)
- ;; We cannot use bioconductor-uri here because this tarball is
- ;; located under "data/annotation/" instead of "bioc/".
- (uri (string-append "https://www.bioconductor.org/packages/"
- "release/data/annotation/src/contrib/"
- "BSgenome.Mmusculus.UCSC.mm9_"
- version ".tar.gz"))
- (sha256
- (base32
- "1birqw30g2azimxpnjfzmkphan7x131yy8b9h85lfz5fjdg7841i"))))
- (properties
- `((upstream-name . "BSgenome.Mmusculus.UCSC.mm9")))
- (build-system r-build-system)
- ;; As this package provides little more than a very large data file it
- ;; doesn't make sense to build substitutes.
- (arguments `(#:substitutable? #f))
- (propagated-inputs
- `(("r-bsgenome" ,r-bsgenome)))
- (home-page
- "https://www.bioconductor.org/packages/BSgenome.Mmusculus.UCSC.mm9/")
- (synopsis "Full genome sequences for Mouse")
- (description
- "This package provides full genome sequences for Mus musculus (Mouse) as
-provided by UCSC (mm9, July 2007) and stored in Biostrings objects.")
- (license license:artistic2.0)))
-
(define-public r-bsgenome-mmusculus-ucsc-mm10
(package
(name "r-bsgenome-mmusculus-ucsc-mm10")