diff options
| author | zimoun <zimon.toutoune@gmail.com> | 2020-09-11 20:08:42 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-09-11 21:58:58 +0200 |
| commit | 496a52dc410e287aa2bd03e962fdc110cfb2a1cc (patch) | |
| tree | 829d12234ce31a7f73dc3c19c43cef7360c56b10 /gnu/packages/cran.scm | |
| parent | c23ff34423bec6982d59cddd295018ae5f4c68b2 (diff) | |
gnu: r-qtl: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-qtl): Move from here...
* gnu/packages/cran.scm (r-qtl): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 0d10793e9f..980ad17594 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2015 Andreas Enge <andreas@enge.fr> +;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl> ;;; Copyright © 2016, 2017 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2016, 2017, 2018, 2020 Roel Janssen <roel@gnu.org> ;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr> @@ -24330,3 +24331,28 @@ are tests where the test statistic is the sum of the product of a covariate (usually group indicator) and the scores.") ;; Any version of the GPL (license license:gpl2+))) + +(define-public r-qtl + (package + (name "r-qtl") + (version "1.46-2") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://cran/src/contrib/qtl_" + version ".tar.gz")) + (sha256 + (base32 + "0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a")))) + (build-system r-build-system) + (home-page "https://rqtl.org/") + (synopsis "R package for analyzing QTL experiments in genetics") + (description "R/qtl is an extension library for the R statistics +system. It is used to analyze experimental crosses for identifying +genes contributing to variation in quantitative traits (so-called +quantitative trait loci, QTLs). + +Using a hidden Markov model, R/qtl estimates genetic maps, to +identify genotyping errors, and to perform single-QTL and two-QTL, +two-dimensional genome scans.") + (license license:gpl3))) |