gnu: Move Sphinx and friends to (gnu packages sphinx).

* gnu/packages/python-xyz.scm (python-sphinxcontrib-websupport,
python2-sphinxcontrib-websupport, python-sphinx, python2-sphinx,
python-sphinx-gallery, python2-sphinx-gallery, python-sphinx-rtd-theme,
python2-sphinx-rtd-theme, python-guzzle-sphinx-theme,
python2-guzzle-sphinx-theme, python-sphinxcontrib-newsfeed,
python-sphinxcontrib-programoutput, python2-sphinxcontrib-programoutput,
python-sphinx-repoze-interface, python2-sphinx-repoze-interface,
python-sphinx-cloud-sptheme, python2-sphinx-cloud-sptheme,
python-sphinx-alabaster-theme, python2-sphinx-alabaster-theme,
python-sphinx-me, python-sphinxcontrib-svg2pdfconverter): Move to ...
(gnu):
* gnu/packages/sphinx.scm: ... here.  New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/packages/admin.scm, gnu/packages/bioinformatics.scm,
gnu/packages/calendar.scm, gnu/packages/cluster.scm,
gnu/packages/databases.scm, gnu/packages/dav.scm, gnu/packages/disk.scm,
gnu/packages/django.scm, gnu/packages/elf.scm, gnu/packages/emacs-xyz.scm,
gnu/packages/emulators.scm, gnu/packages/finance.scm, gnu/packages/image.scm,
gnu/packages/libffi.scm, gnu/packages/mail.scm, gnu/packages/mpd.scm,
gnu/packages/openstack.scm, gnu/packages/pdf.scm, gnu/packages/python-web.scm,
gnu/packages/search.scm, gnu/packages/statistics.scm,
gnu/packages/storage.scm, gnu/packages/sync.scm, gnu/packages/terminals.scm,
gnu/packages/tls.scm, gnu/packages/web.scm: Adjust module imports.

1 files changed, 369 insertions, 0 deletions

diff --git a/gnu/packages/sphinx.scm b/gnu/packages/sphinx.scm
new file mode 100644
index 0000000000..28925a0492
--- /dev/null
+++ b/gnu/packages/sphinx.scm
@@ -0,0 +1,369 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2014 David Thompson <davet@gnu.org>
+;;; Copyright © 2015, 2017 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2016, 2017 Leo Famulari <leo@famulari.name>
+;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
+;;; Copyright © 2016, 2017, 2018, 2019 Marius Bakke <mbakke@fastmail.com>
+;;; Copyright © 2017 Danny Milosavljevic <dannym+a@scratchpost.org>
+;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
+;;; Copyright © 2017 Christopher Allan Webber <cwebber@dustycloud.org>
+;;; Copyright © 2017 Julien Lepiller <julien@lepiller.eu>
+;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages sphinx)
+  #:use-module (guix packages)
+  #:use-module (guix download)
+  #:use-module (guix build-system python)
+  #:use-module ((guix licenses) #:prefix license:)
+  #:use-module (gnu packages)
+  #:use-module (gnu packages check)
+  #:use-module (gnu packages graphviz)
+  #:use-module (gnu packages image)
+  #:use-module (gnu packages imagemagick)
+  #:use-module (gnu packages python-web)
+  #:use-module (gnu packages python-xyz)
+  #:use-module (gnu packages time))
+
+(define-public python-sphinx
+  (package
+    (name "python-sphinx")
+    (version "1.7.7")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "Sphinx" version))
+       (sha256
+        (base32
+         "0pkkbfj7cl157q550gcs45am5y78ps0h7q6455d64s1zmw01jlvi"))))
+    (build-system python-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (replace 'check
+           (lambda _
+             ;; Requires Internet access.
+             (delete-file "tests/test_build_linkcheck.py")
+             (substitute* "tests/test_build_latex.py"
+               (("@pytest.mark.sphinx\\('latex', testroot='images'\\)")
+                "@pytest.mark.skip()"))
+             (when (which "python")
+               ;; XXX: These tests are broken when using Python2:
+               ;; <https://github.com/sphinx-doc/sphinx/issues/4710>.
+               (delete-file "tests/test_api_translator.py")
+               (delete-file "tests/test_setup_command.py"))
+             (invoke "make" "test"))))))
+    (propagated-inputs
+     `(("python-imagesize" ,python-imagesize)
+       ("python-sphinx-alabaster-theme"
+        ,python-sphinx-alabaster-theme)
+       ("python-babel" ,python-babel)
+       ("python-snowballstemmer" ,python-snowballstemmer)
+       ("python-docutils" ,python-docutils)
+       ("python-jinja2" ,python-jinja2)
+       ("python-packaging" ,python-packaging)
+       ("python-pygments" ,python-pygments)
+       ("python-requests" ,python-requests)
+       ("python-six" ,python-six)
+       ("python-sphinxcontrib-websupport" ,python-sphinxcontrib-websupport)))
+    (native-inputs
+     `(("graphviz" ,graphviz)
+       ("imagemagick" ,imagemagick)                    ;for "convert"
+       ("python-html5lib" ,python-html5lib)
+       ("python-mock" ,python-mock)
+       ("python-nose" ,python-nose)
+       ("python-pytest" ,python-pytest)))
+    (home-page "http://sphinx-doc.org/")
+    (synopsis "Python documentation generator")
+    (description "Sphinx is a tool that makes it easy to create documentation
+for Python projects or other documents consisting of multiple reStructuredText
+sources.")
+    (license license:bsd-3)
+    (properties `((python2-variant . ,(delay python2-sphinx))))))
+
+(define-public python2-sphinx
+  (let ((base (package-with-python2 (strip-python2-variant python-sphinx))))
+    (package
+      (inherit base)
+      (native-inputs `(("python2-mock" ,python2-mock)
+                       ("python2-enum34" ,python2-enum34)
+                       ,@(package-native-inputs base)))
+      (propagated-inputs `(("python2-pytz" ,python2-pytz)
+                           ("python2-typing" ,python2-typing)
+                       ,@(package-propagated-inputs base))))))
+
+(define-public python-sphinxcontrib-newsfeed
+  (package
+    (name "python-sphinxcontrib-newsfeed")
+    (version "0.1.4")
+    (source (origin
+             (method url-fetch)
+             (uri (pypi-uri "sphinxcontrib-newsfeed" version))
+             (sha256
+              (base32
+               "1d7gam3mn8v4in4p16yn3v10vps7nnaz6ilw99j4klij39dqd37p"))))
+    (arguments '(#:tests? #f)) ; No tests.
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-sphinx" ,python-sphinx)))
+    (synopsis "News Feed extension for Sphinx")
+    (description "Sphinxcontrib-newsfeed is an extension for adding a simple
+Blog, News or Announcements section to a Sphinx website.")
+    (home-page "https://bitbucket.org/prometheus/sphinxcontrib-newsfeed")
+    (license license:bsd-2)))
+
+(define-public python-sphinxcontrib-programoutput
+  (package
+    (name "python-sphinxcontrib-programoutput")
+    (version "0.10")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "sphinxcontrib-programoutput" version))
+              (sha256
+               (base32
+                "153hhnlbx4688zj9wd64819ps5znc2jlyp5crkgzvn5hxgy99vpx"))))
+    (build-system python-build-system)
+    (arguments
+     ;; FIXME: Many tests are failing and the upstream is gone.
+     '(#:tests? #f))
+    (propagated-inputs
+     `(("python-sphinx" ,python-sphinx)))
+    (synopsis "Sphinx extension to include program output")
+    (description "A Sphinx extension to literally insert the output of arbitrary
+commands into documents, helping you to keep your command examples up to date.")
+    (home-page "https://github.com/lunaryorn/sphinxcontrib-programoutput")
+    (license license:bsd-2)))
+
+(define-public python2-sphinxcontrib-programoutput
+  (package-with-python2 python-sphinxcontrib-programoutput))
+
+(define-public python-sphinxcontrib-svg2pdfconverter
+  (package
+    (name "python-sphinxcontrib-svg2pdfconverter")
+    (version "0.1.0")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "sphinxcontrib-svg2pdfconverter" version))
+              (sha256
+               (base32
+                "1abvbgkkii13q8nsb10r0gc5lm0p9iq1iwhfhakn5ifn6asa0183"))))
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-sphinx" ,python-sphinx)))
+    (home-page "https://github.com/missinglinkelectronics/sphinxcontrib-svg2pdfconverter/releases")
+    (synopsis "Sphinx SVG to PDF converter extension")
+    (description "A Sphinx extension to convert SVG images to PDF in case the builder does not support
+SVG images natively (e.g. LaTeX).")
+    (license license:bsd-3)))
+
+(define-public python-sphinxcontrib-websupport
+  (package
+    (name "python-sphinxcontrib-websupport")
+    (version "1.1.0")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "sphinxcontrib-websupport" version))
+              (sha256
+               (base32
+                "1ff3ix76xi1y6m99qxhaq5161ix9swwzydilvdya07mgbcvpzr4x"))))
+    (build-system python-build-system)
+    (arguments
+     ;; FIXME: Tests depend on Sphinx, which depends on this.
+     `(#:tests? #f))
+    (home-page "http://sphinx-doc.org/")
+    (synopsis "Sphinx API for web applications")
+    (description "This package provides a Python API to easily integrate
+Sphinx documentation into your web application.  It provides tools to
+integrate Sphinx documents in web templates and to handle searches.")
+    (license license:bsd-3)))
+
+(define-public python2-sphinxcontrib-websupport
+  (package-with-python2 python-sphinxcontrib-websupport))
+
+(define-public python-sphinx-gallery
+  (package
+    (name "python-sphinx-gallery")
+    (version "0.1.13")
+    (source (origin
+              (method url-fetch)
+              (uri (string-append "https://github.com/sphinx-gallery/sphinx-gallery"
+                                  "/archive/v" version ".tar.gz"))
+              (file-name (string-append name "-" version ".tar.gz"))
+              (sha256
+               (base32
+                "03fs99mcb1r7qp0xixqv07vcz98sk21yq19ffdysi0infdcpzfkd"))))
+    (build-system python-build-system)
+    (arguments
+     ;; FIXME: Tests attempt to download <https://docs.python.org/3/objects.inv>,
+     ;; <https://docs.scipy.org/doc/numpy/objects.inv>, and
+     ;; <https://matplotlib.org/objects.inv>.
+     `(#:tests? #f))
+    (native-inputs
+     `(("python-pytest-runner" ,python-pytest-runner)))
+    (home-page "https://sphinx-gallery.github.io/")
+    (synopsis "Generate an examples gallery automatically")
+    (description
+     "@code{sphinx_gallery} is a Sphinx extension that builds an HTML version
+from any set of Python scripts and puts it into an examples gallery.")
+    (license license:bsd-3)))
+
+(define-public python2-sphinx-gallery
+  (package-with-python2 python-sphinx-gallery))
+
+(define-public python-sphinx-me
+  (package
+    (name "python-sphinx-me")
+    (version "0.3")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "sphinx-me" version))
+       (sha256
+        (base32
+         "06jzgp213zihnvpcy2y5jy3ykid3apc2ncp2pg6a2g05lhiziglq"))))
+    (build-system python-build-system)
+    (home-page "https://github.com/stephenmcd/sphinx-me")
+    (synopsis "Create a Sphinx documentation shell")
+    (description
+      "Create a Sphinx documentation shell for your project and include the
+README file as the documentation index.  It handles extracting the required
+meta data such as the project name, author and version from your project for
+use in your Sphinx docs.")
+    (license license:bsd-2)))
+
+(define-public python2-sphinx-me
+  (package-with-python2 python-sphinx-me))
+
+(define-public python-sphinx-repoze-autointerface
+  (package
+    (name "python-sphinx-repoze-autointerface")
+    (version "0.8")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "repoze.sphinx.autointerface" version))
+              (sha256
+               (base32
+                "08ycivzf7bh4a1zcyp31hbyqs1b2c9r26raa3vxjwwmbfqr3iw4f"))))
+    (build-system python-build-system)
+    (arguments '(#:tests? #f)) ; No tests.
+    (propagated-inputs
+     `(("python-sphinx" ,python-sphinx)
+       ("python-zope-interface" ,python-zope-interface)))
+    (synopsis "Auto-generate Sphinx API docs from Zope interfaces")
+    (description "This package defines an extension for the Sphinx documentation
+system.  The extension allows generation of API documentation by
+introspection of @code{zope.interface} instances in code.")
+    (home-page "https://github.com/repoze/repoze.sphinx.autointerface")
+    (license license:repoze)))
+
+(define-public python2-sphinx-repoze-autointerface
+  (package-with-python2 python-sphinx-repoze-autointerface))
+
+(define-public python-sphinx-alabaster-theme
+  (package
+    (name "python-sphinx-alabaster-theme")
+    (version "0.7.12")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "alabaster" version))
+              (sha256
+               (base32
+                "00nwwjj2d2ym4s2kk217x7jkx1hnczc3fvm8yxbqmsp6b0nxfqd6"))))
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-pygments" ,python-pygments)))
+    (home-page "https://alabaster.readthedocs.io/")
+    (synopsis "Configurable sidebar-enabled Sphinx theme")
+    (description "Alabaster is a visually (c)lean, responsive, configurable
+theme for the Sphinx documentation system.  It's the default theme of Sphinx.")
+    (license license:bsd-3)))
+
+(define-public python2-sphinx-alabaster-theme
+  (package-with-python2 python-sphinx-alabaster-theme))
+
+(define-public python-sphinx-cloud-sptheme
+  (package
+    (name "python-sphinx-cloud-sptheme")
+    (version "1.8.0")
+    (source (origin
+              (method url-fetch)
+              (uri (pypi-uri "cloud_sptheme" version))
+              (sha256
+               (base32
+                "1dniqb6a39yh786f86c4jn666rwnyi1jvzn4616zhcchb7sfdshd"))))
+    (build-system python-build-system)
+    ;; FIXME: The 'pypi' release archive does not contain tests.
+    (arguments '(#:tests? #f))
+    (native-inputs
+     `(("python-sphinx" ,python-sphinx)))
+    (home-page "https://bitbucket.org/ecollins/cloud_sptheme")
+    (synopsis "'Cloud' theme for Sphinx documenter")
+    (description "This package contains the \"Cloud\" theme for Sphinx and some
+related extensions.")
+    (license license:bsd-3)))
+
+(define-public python2-sphinx-cloud-sptheme
+  (package-with-python2 python-sphinx-cloud-sptheme))
+
+(define-public python-guzzle-sphinx-theme
+  (package
+    (name "python-guzzle-sphinx-theme")
+    (version "0.7.11")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (pypi-uri "guzzle_sphinx_theme" version))
+        (sha256
+         (base32
+          "1rnkzrrsbnifn3vsb4pfaia3nlvgvw6ndpxp7lzjrh23qcwid34v"))))
+    (build-system python-build-system)
+    (propagated-inputs
+     `(("python-sphinx" ,python-sphinx)))
+    (home-page "https://github.com/guzzle/guzzle_sphinx_theme")
+    (synopsis "Sphinx theme used by Guzzle")
+    (description "This package provides guzzle_sphinx_theme, a theme for the
+Sphinx documentation system, used by @uref{http://docs.guzzlephp.org, Guzzle}
+and several other projects.")
+    (license license:expat)))
+
+(define-public python2-guzzle-sphinx-theme
+  (package-with-python2 python-guzzle-sphinx-theme))
+
+(define-public python-sphinx-rtd-theme
+  (package
+    (name "python-sphinx-rtd-theme")
+    (version "0.2.4")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (pypi-uri "sphinx_rtd_theme" version))
+       (sha256
+        (base32
+         "05rlhjzdyapr2w74jjs7mrm8hi69qskcr5vya9f9drpsys7lpxrd"))))
+    (build-system python-build-system)
+    (arguments '(#:tests? #f)) ; No tests.
+    (propagated-inputs
+     `(("python-sphinx" ,python-sphinx)))
+    (home-page "https://github.com/snide/sphinx_rtd_theme/")
+    (synopsis "ReadTheDocs.org theme for Sphinx")
+    (description "A theme for Sphinx used by ReadTheDocs.org.")
+    (license license:expat)))
+
+(define-public python2-sphinx-rtd-theme
+  (package-with-python2 python-sphinx-rtd-theme))