diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2020-06-12 15:55:57 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-06-13 01:19:39 +0200 |
| commit | 3d7de4ed829b264acc26e74bc6d4c758e0249611 (patch) | |
| tree | 44505c86180599a743a0df5cfc643af5707f6bd3 /gnu/packages | |
| parent | 5fdea056c981dc4ecb0594b36c188436a370cad8 (diff) | |
gnu: r-deseq2: Update to 1.28.1.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.28.1.
[propagated-inputs]: Remove r-hmisc.
[native-inputs]: Add r-knitr.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 7 |
1 files changed, 4 insertions, 3 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 7b382d00a7..72f7ee602b 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -6975,14 +6975,14 @@ high-throughput sequencing experiments.") (define-public r-deseq2 (package (name "r-deseq2") - (version "1.26.0") + (version "1.28.1") (source (origin (method url-fetch) (uri (bioconductor-uri "DESeq2" version)) (sha256 (base32 - "1lmbhznfs8dz9ipd53z4ccwvwxqwzx1ayw56jlrvlsambaj8fash")))) + "0xh12c2skr0bbv893p05gvbismkcnqw8zwh7yz4wmycgajfzg2pp")))) (properties `((upstream-name . "DESeq2"))) (build-system r-build-system) (propagated-inputs @@ -6993,13 +6993,14 @@ high-throughput sequencing experiments.") ("r-geneplotter" ,r-geneplotter) ("r-genomicranges" ,r-genomicranges) ("r-ggplot2" ,r-ggplot2) - ("r-hmisc" ,r-hmisc) ("r-iranges" ,r-iranges) ("r-locfit" ,r-locfit) ("r-rcpp" ,r-rcpp) ("r-rcpparmadillo" ,r-rcpparmadillo) ("r-s4vectors" ,r-s4vectors) ("r-summarizedexperiment" ,r-summarizedexperiment))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://bioconductor.org/packages/DESeq2") (synopsis "Differential gene expression analysis") (description |