diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2023-07-11 20:16:53 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-07-12 14:29:09 +0200 |
| commit | a9d140996cdd7282cf98343ab5bd5d06ed440280 (patch) | |
| tree | 2ed420cef4fa3b07e36a9468471fa1b9baf3bc9d /gnu/packages | |
| parent | b864a5956f076c247eab6fe62761100c7694fdcb (diff) | |
gnu: r-isoformswitchanalyzer: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-isoformswitchanalyzer): Update to 2.0.1.
[propagated-inputs]: Remove r-drimseq; add r-biocparallel, r-pfamanalyzer, r-s4vectors,
r-saturn, r-summarizedexperiment, r-sva, and r-tidyr.
Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 12 |
1 files changed, 9 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index b1c609f746..6655be8c17 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5153,24 +5153,24 @@ possible.") (define-public r-isoformswitchanalyzer (package (name "r-isoformswitchanalyzer") - (version "1.21.0") + (version "2.0.1") (source (origin (method url-fetch) (uri (bioconductor-uri "IsoformSwitchAnalyzeR" version)) (sha256 - (base32 "1vzzsqjnkaffyxgvw6bsbxhgg1102cap2hsmzkhwzh6bvh02bwkx")))) + (base32 "1zjwhxlayz2sb77vspw280didhawj282i5gvxnydcdparg165zwf")))) (properties `((upstream-name . "IsoformSwitchAnalyzeR"))) (build-system r-build-system) (propagated-inputs (list r-biobase r-biocgenerics + r-biocparallel r-biostrings r-bsgenome r-dbi r-dexseq r-dplyr - r-drimseq r-edger r-futile-logger r-genomeinfodb @@ -5180,14 +5180,20 @@ possible.") r-iranges r-limma r-magrittr + r-pfamanalyzer r-plyr r-rcolorbrewer r-rcurl r-readr r-reshape2 r-rtracklayer + r-s4vectors + r-saturn r-stringr + r-summarizedexperiment + r-sva r-tibble + r-tidyr r-tximeta r-tximport r-venndiagram |