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authorzimoun <zimon.toutoune@gmail.com>2021-03-08 18:57:57 +0100
committerRicardo Wurmus <rekado@elephly.net>2021-03-12 14:45:53 +0100
commitff92c2873c0c8ab9fa6e90020d656aac47dfb088 (patch)
treee768420dae1b4593cbed54386ca2a9557c78edd2 /gnu/packages
parentd769b10714ba4ab96a27933b6840265cf6e06f37 (diff)
gnu: r-annotationforge: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-annotationforge): Move from here... * gnu/packages/bioconductor.scm (r-annotationforge): ...to here.
Diffstat (limited to 'gnu/packages')
-rw-r--r--gnu/packages/bioconductor.scm32
-rw-r--r--gnu/packages/bioinformatics.scm32
2 files changed, 32 insertions, 32 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 0c36b01545..c698178067 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1487,6 +1487,38 @@ structure.")
microarrays.")
(license license:artistic2.0)))
+(define-public r-annotationforge
+ (package
+ (name "r-annotationforge")
+ (version "1.32.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "AnnotationForge" version))
+ (sha256
+ (base32
+ "0y3820dkvwz09wlmz9drx6gqpsr9cwppaiz40zafwfxbz65y8px7"))))
+ (properties
+ `((upstream-name . "AnnotationForge")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-annotationdbi" ,r-annotationdbi)
+ ("r-biobase" ,r-biobase)
+ ("r-biocgenerics" ,r-biocgenerics)
+ ("r-dbi" ,r-dbi)
+ ("r-rcurl" ,r-rcurl)
+ ("r-rsqlite" ,r-rsqlite)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-xml" ,r-xml)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://bioconductor.org/packages/AnnotationForge")
+ (synopsis "Code for building annotation database packages")
+ (description
+ "This package provides code for generating Annotation packages and their
+databases. Packages produced are intended to be used with AnnotationDbi.")
+ (license license:artistic2.0)))
+
(define-public r-deseq2
(package
(name "r-deseq2")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 41372879fe..575158577c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7387,38 +7387,6 @@ includes software to
")
(license license:cc0))))
-(define-public r-annotationforge
- (package
- (name "r-annotationforge")
- (version "1.32.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "AnnotationForge" version))
- (sha256
- (base32
- "0y3820dkvwz09wlmz9drx6gqpsr9cwppaiz40zafwfxbz65y8px7"))))
- (properties
- `((upstream-name . "AnnotationForge")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-annotationdbi" ,r-annotationdbi)
- ("r-biobase" ,r-biobase)
- ("r-biocgenerics" ,r-biocgenerics)
- ("r-dbi" ,r-dbi)
- ("r-rcurl" ,r-rcurl)
- ("r-rsqlite" ,r-rsqlite)
- ("r-s4vectors" ,r-s4vectors)
- ("r-xml" ,r-xml)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (home-page "https://bioconductor.org/packages/AnnotationForge")
- (synopsis "Code for building annotation database packages")
- (description
- "This package provides code for generating Annotation packages and their
-databases. Packages produced are intended to be used with AnnotationDbi.")
- (license license:artistic2.0)))
-
(define-public r-rbgl
(package
(name "r-rbgl")