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authorzimoun <zimon.toutoune@gmail.com>2021-05-21 22:26:19 +0200
committerRicardo Wurmus <rekado@elephly.net>2021-05-31 15:39:00 +0200
commit31e50e1f48308a78a04f9aced53f2c2706660b31 (patch)
treee766d57d60d42bb8d097983332d603036bcc3e16 /gnu
parent0eaa75c8117b4e91475d7c4ad9960b925cef5d56 (diff)
gnu: r-chipseq: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-chipseq): Move from here... * gnu/packages/bioconductor.scm (r-chipseq): ...to here.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm26
-rw-r--r--gnu/packages/bioinformatics.scm26
2 files changed, 26 insertions, 26 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 5ae045456a..2a7872cbd2 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2411,6 +2411,32 @@ genome data packages and support for efficient SNP representation.")
analysis.")
(license license:artistic2.0)))
+(define-public r-chipseq
+ (package
+ (name "r-chipseq")
+ (version "1.40.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "chipseq" version))
+ (sha256
+ (base32
+ "12pzq24aarvgxfmhcad0l5g951xqdvvi7bspgbsvlvmfkqd74j2v"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-biocgenerics" ,r-biocgenerics)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-iranges" ,r-iranges)
+ ("r-lattice" ,r-lattice)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-shortread" ,r-shortread)))
+ (home-page "https://bioconductor.org/packages/chipseq")
+ (synopsis "Package for analyzing ChIPseq data")
+ (description
+ "This package provides tools for processing short read data from ChIPseq
+experiments.")
+ (license license:artistic2.0)))
+
(define-public r-complexheatmap
(package
(name "r-complexheatmap")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a241a83c80..aa92ae3916 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8486,32 +8486,6 @@ analysis, variant tools is project based and provides a whole set of tools to
manipulate and analyze genetic variants.")
(license license:gpl3+)))
-(define-public r-chipseq
- (package
- (name "r-chipseq")
- (version "1.40.0")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "chipseq" version))
- (sha256
- (base32
- "12pzq24aarvgxfmhcad0l5g951xqdvvi7bspgbsvlvmfkqd74j2v"))))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-biocgenerics" ,r-biocgenerics)
- ("r-genomicranges" ,r-genomicranges)
- ("r-iranges" ,r-iranges)
- ("r-lattice" ,r-lattice)
- ("r-s4vectors" ,r-s4vectors)
- ("r-shortread" ,r-shortread)))
- (home-page "https://bioconductor.org/packages/chipseq")
- (synopsis "Package for analyzing ChIPseq data")
- (description
- "This package provides tools for processing short read data from ChIPseq
-experiments.")
- (license license:artistic2.0)))
-
(define-public r-copyhelper
(package
(name "r-copyhelper")