diff options
| author | Ricardo Wurmus <rekado@elephly.net> | 2020-06-13 00:48:48 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-06-13 01:19:53 +0200 |
| commit | 63c8323ae9b9cf9cd9684a65bfacc05077c65583 (patch) | |
| tree | a1e64eea10a55d991ff45107899371d9fc3c38ba /gnu | |
| parent | 43fb14cedcf563824064f1d04240f0bbc68f267f (diff) | |
gnu: r-clusterprofiler: Update to 3.16.0.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 3.16.0.
[propagated-inputs]: Remove r-ggplot2; add r-downloader and r-dplyr.
[native-inputs]: Add r-knitr.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 9 |
1 files changed, 6 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index dc4d1572ac..ffc72b1453 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -3810,22 +3810,23 @@ All the visualization methods are developed based on ggplot2 graphics.") (define-public r-clusterprofiler (package (name "r-clusterprofiler") - (version "3.14.3") + (version "3.16.0") (source (origin (method url-fetch) (uri (bioconductor-uri "clusterProfiler" version)) (sha256 (base32 - "08pd7bmqmyxncj09ilz8yb9sf1pv9ni98y8b93pz2giy7pl407hg")))) + "0m7919gzrd2fddb4kcznwpshhab1ha2yppnkxg11zmh40wcdawyi")))) (properties `((upstream-name . "clusterProfiler"))) (build-system r-build-system) (propagated-inputs `(("r-annotationdbi" ,r-annotationdbi) ("r-dose" ,r-dose) + ("r-downloader" ,r-downloader) + ("r-dplyr" ,r-dplyr) ("r-enrichplot" ,r-enrichplot) - ("r-ggplot2" ,r-ggplot2) ("r-go-db" ,r-go-db) ("r-gosemsim" ,r-gosemsim) ("r-magrittr" ,r-magrittr) @@ -3833,6 +3834,8 @@ All the visualization methods are developed based on ggplot2 graphics.") ("r-qvalue" ,r-qvalue) ("r-rvcheck" ,r-rvcheck) ("r-tidyr" ,r-tidyr))) + (native-inputs + `(("r-knitr" ,r-knitr))) (home-page "https://guangchuangyu.github.io/software/clusterProfiler/") (synopsis "Analysis and visualization of functional profiles for gene clusters") (description |