diff options
| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2022-08-22 12:33:19 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-08-23 11:43:20 +0200 |
| commit | 6c21c9fab1079e445e9ea2d23c007247fdac1199 (patch) | |
| tree | 36c076ba3d513b37a233eda1a4a2611f9febf47d /gnu | |
| parent | fc4ff8c3e13fb693d7c983d914e088cde38ac56b (diff) | |
gnu: Add r-parathyroidse.
* gnu/packages/bioconductor.scm (r-parathyroidse): New variable.
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 7d2ca413e9..b4f880a080 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -1541,6 +1541,30 @@ harmonized subsetting of rows (features) and columns (patients / samples) across the entire multi-'omics experiment.") (license license:artistic2.0))) +(define-public r-parathyroidse + (package + (name "r-parathyroidse") + (version "1.34.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "parathyroidSE" version + 'experiment)) + (sha256 + (base32 + "1h33x55c4gbzmh085skqif04wdcvjp2l9fm55qzwws27kwd30c16")))) + (properties `((upstream-name . "parathyroidSE"))) + (build-system r-build-system) + (propagated-inputs (list r-summarizedexperiment)) + (home-page "https://bioconductor.org/packages/parathyroidSE") + (synopsis "RangedSummarizedExperiment for RNA-Seq of parathyroid tumors") + (description + "This package provides @code{RangedSummarizedExperiment} objects of read +counts in genes and exonic parts for paired-end RNA-Seq data from experiments on +primary cultures of parathyroid tumors. The sequencing was performed on tumor +cultures from 4 patients at 2 time points over 3 conditions (DPN, OHT and control).") + ;; The author(s) mentions only LGPL without any specific version. + (license license:lgpl2.1+))) + (define-public r-tcgabiolinksgui-data (package (name "r-tcgabiolinksgui-data") |