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authorzimoun <zimon.toutoune@gmail.com>2022-11-17 03:50:29 +0100
committerRicardo Wurmus <rekado@elephly.net>2022-11-24 12:31:59 +0100
commitc705fcaaa5800f5dc781898fee5d017568a488cc (patch)
tree296256877624116066ad9f13cad368f473087854 /gnu
parent4f3b6abb5f1b2763bbc7917767aee357949c2a3d (diff)
gnu: r-rgreat: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.0.1. [propagated-inputs]: Add r-annotationdbi, r-circlize, r-digest, r-doparallel, r-dt, r-foreach, r-genomeinfodb, r-genomicfeatures, r-globaloptions, r-go-db, r-org-hs-eg-db, r-progress, r-rcolorbrewer, r-rcpp, r-s4vectors, r-shiny, r-txdb-hsapiens-ucsc-hg19-knowngene, and r-txdb-hsapiens-ucsc-hg38-knowngene.
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm28
1 files changed, 25 insertions, 3 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f4daeb867d..71a060be87 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -15362,18 +15362,40 @@ dimensional mass cytometry data.")
(define-public r-rgreat
(package
(name "r-rgreat")
- (version "1.28.0")
+ (version "2.0.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "rGREAT" version))
(sha256
(base32
- "0px72r8mjimf5mxfwb9qz46kqpgjw5gaqq41hy0212ymjd8whaky"))))
+ "1s1xx15ilamcyd8f7cnsgdc3r3izhx9wxmb8amamrmr9bzijjvhi"))))
(properties `((upstream-name . "rGREAT")))
(build-system r-build-system)
(propagated-inputs
- (list r-genomicranges r-getoptlong r-iranges r-rcurl r-rjson))
+ (list r-annotationdbi
+ r-circlize
+ r-digest
+ r-doparallel
+ r-dt
+ r-foreach
+ r-genomeinfodb
+ r-genomicfeatures
+ r-genomicranges
+ r-getoptlong
+ r-globaloptions
+ r-go-db
+ r-iranges
+ r-org-hs-eg-db
+ r-progress
+ r-rcolorbrewer
+ r-rcurl
+ r-rcpp
+ r-rjson
+ r-s4vectors
+ r-shiny
+ r-txdb-hsapiens-ucsc-hg19-knowngene
+ r-txdb-hsapiens-ucsc-hg38-knowngene))
(native-inputs (list r-knitr))
(home-page "https://github.com/jokergoo/rGREAT")
(synopsis "Client for GREAT analysis")