diff options
| -rw-r--r-- | gnu/packages/python.scm | 59 | ||||
| -rw-r--r-- | gnu/packages/statistics.scm | 58 |
2 files changed, 58 insertions, 59 deletions
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index a1a9b44dc4..5a32681643 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -120,7 +120,6 @@ #:use-module (gnu packages search) #:use-module (gnu packages shells) #:use-module (gnu packages ssh) - #:use-module (gnu packages statistics) #:use-module (gnu packages terminals) #:use-module (gnu packages tex) #:use-module (gnu packages texinfo) @@ -3731,64 +3730,6 @@ those files. It can also efficiently manipulate ranges of integers using set operators such as union, intersection, and difference.") (license license:asl2.0))) -(define-public python-rpy2 - (package - (name "python-rpy2") - (version "2.9.4") - (source - (origin - (method url-fetch) - (uri (pypi-uri "rpy2" version)) - (sha256 - (base32 - "0bl1d2qhavmlrvalir9hmkjh74w21vzkvc2sg3cbb162s10zfmxy")))) - (build-system python-build-system) - (arguments - '(#:modules ((ice-9 ftw) - (srfi srfi-1) - (srfi srfi-26) - (guix build utils) - (guix build python-build-system)) - #:phases - (modify-phases %standard-phases - (replace 'check - (lambda* (#:key outputs inputs #:allow-other-keys) - (let ((cwd (getcwd))) - (setenv "PYTHONPATH" - (string-append cwd "/build/" - (find (cut string-prefix? "lib" <>) - (scandir (string-append cwd "/build"))) - ":" - (getenv "PYTHONPATH")))) - (invoke "python" "-m" "rpy2.tests" "-v")))))) - (propagated-inputs - `(("python-six" ,python-six) - ("python-jinja2" ,python-jinja2) - ("python-pytz" ,python-pytz))) - (inputs - `(("readline" ,readline) - ("icu4c" ,icu4c) - ("pcre" ,pcre) - ("r-minimal" ,r-minimal) - ("r-survival" ,r-survival) - ("r-ggplot2" ,r-ggplot2) - ("r-rsqlite" ,r-rsqlite) - ("r-dplyr" ,r-dplyr) - ("r-dbplyr" ,r-dbplyr) - ("python-numpy" ,python-numpy))) - (native-inputs - `(("zlib" ,zlib))) - (home-page "https://rpy2.bitbucket.io/") - (synopsis "Python interface to the R language") - (description "rpy2 is a redesign and rewrite of rpy. It is providing a -low-level interface to R from Python, a proposed high-level interface, -including wrappers to graphical libraries, as well as R-like structures and -functions.") - ;; Any of these licenses can be picked for the R interface. The whole - ;; project is released under GPLv2+ according to the license declaration - ;; in "setup.py". - (license (list license:mpl2.0 license:gpl2+ license:lgpl2.1+)))) - (define-public python-scipy (package (name "python-scipy") diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index cc879be99c..1e28b9234b 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -5711,6 +5711,64 @@ plotting function (and equivalents of curve, density, acf and barplot) as well as a boxplot function.") (license license:lgpl3+))) +(define-public python-rpy2 + (package + (name "python-rpy2") + (version "2.9.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "rpy2" version)) + (sha256 + (base32 + "0bl1d2qhavmlrvalir9hmkjh74w21vzkvc2sg3cbb162s10zfmxy")))) + (build-system python-build-system) + (arguments + '(#:modules ((ice-9 ftw) + (srfi srfi-1) + (srfi srfi-26) + (guix build utils) + (guix build python-build-system)) + #:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key outputs inputs #:allow-other-keys) + (let ((cwd (getcwd))) + (setenv "PYTHONPATH" + (string-append cwd "/build/" + (find (cut string-prefix? "lib" <>) + (scandir (string-append cwd "/build"))) + ":" + (getenv "PYTHONPATH")))) + (invoke "python" "-m" "rpy2.tests" "-v")))))) + (propagated-inputs + `(("python-six" ,python-six) + ("python-jinja2" ,python-jinja2) + ("python-pytz" ,python-pytz))) + (inputs + `(("readline" ,readline) + ("icu4c" ,icu4c) + ("pcre" ,pcre) + ("r-minimal" ,r-minimal) + ("r-survival" ,r-survival) + ("r-ggplot2" ,r-ggplot2) + ("r-rsqlite" ,r-rsqlite) + ("r-dplyr" ,r-dplyr) + ("r-dbplyr" ,r-dbplyr) + ("python-numpy" ,python-numpy))) + (native-inputs + `(("zlib" ,zlib))) + (home-page "https://rpy2.bitbucket.io/") + (synopsis "Python interface to the R language") + (description "rpy2 is a redesign and rewrite of rpy. It is providing a +low-level interface to R from Python, a proposed high-level interface, +including wrappers to graphical libraries, as well as R-like structures and +functions.") + ;; Any of these licenses can be picked for the R interface. The whole + ;; project is released under GPLv2+ according to the license declaration + ;; in "setup.py". + (license (list license:mpl2.0 license:gpl2+ license:lgpl2.1+)))) + (define-public java-jdistlib (package (name "java-jdistlib") |