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| -rw-r--r-- | gnu/packages/bioconductor.scm | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index ffac75edcd..9663ebca35 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9109,6 +9109,43 @@ isotypes. This R package enables the identification and classification of such domain isotypes from pfam data.") (license license:expat))) +(define-public r-piano + (package + (name "r-piano") + (version "2.16.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "piano" version)) + (sha256 + (base32 "0rm9afgq4n7yinmx09b0xd17wgzhbswm80vcjmmwxr6fv1741xfy")))) + (properties `((upstream-name . "piano"))) + (build-system r-build-system) + (propagated-inputs + (list r-biobase + r-biocgenerics + r-dt + r-fgsea + r-gplots + r-htmlwidgets + r-igraph + r-marray + r-relations + r-scales + r-shiny + r-shinydashboard + r-shinyjs + r-visnetwork)) + (native-inputs (list r-knitr)) + (home-page "https://varemo.github.io/piano/") + (synopsis "Platform for integrative analysis of omics data") + (description + "Piano performs gene set analysis using various statistical methods, from +different gene level statistics and a wide range of gene-set collections. The +package contains functions for combining the results of multiple runs of gene +set analyses.") + (license license:gpl2+))) + ;; This is a CRAN package, but it depends on a Bioconductor package: ;; r-aroma-light, r-dnacopy.. (define-public r-pscbs |