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Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index e29c3b6372..0e08a951a6 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -16196,6 +16196,32 @@ control samples and applying quantile normalization on all markers of interest.") (license license:gpl2+)))) +(define-public r-kbet + (let ((commit "f35171dfb04c7951b8a09ac778faf7424c4b6bc0") + (revision "1")) + (package + (name "r-kbet") + (version (git-version "0.99.6" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/theislab/kBET") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1r91prl2kki3zk694vhlmxdlqh0ixlhs8jfcqw6wc7cdsa0nv67k")))) + (properties `((upstream-name . "kBET"))) + (build-system r-build-system) + (propagated-inputs (list r-cluster r-fnn r-ggplot2 r-mass r-rcolorbrewer)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/theislab/kBET") + (synopsis "k-nearest neighbour batch effect test") + (description + "This tool detects batch effects in high-dimensional data based on chi^2-test.") + ;; Any version of the GPL + (license license:gpl3+)))) + (define-public ccwl (package (name "ccwl") |