diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 125 |
1 files changed, 125 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index a36c845479..e88d893517 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -3246,6 +3246,28 @@ re-imagining of @code{httr} that uses a pipe-based interface and solves more of the problems that API wrapping packages face.") (license license:expat))) +(define-public r-jsonify + (package + (name "r-jsonify") + (version "1.2.2") + (source (origin + (method url-fetch) + (uri (cran-uri "jsonify" version)) + (sha256 + (base32 + "0bxgyj5b1hnijq5315g050giixy4k5mjz2zdx8yil0igb5ifji9p")))) + (properties `((upstream-name . "jsonify"))) + (build-system r-build-system) + (propagated-inputs (list r-rapidjsonr r-rcpp)) + (native-inputs (list r-knitr)) + (home-page "https://cran.r-project.org/package=jsonify") + (synopsis + "Convert between R objects and JavaScript Object Notation (JSON)") + (description + "This package enables conversions between R objects and JavaScript Object +Notation (JSON) using the rapidjsonr library.") + (license license:expat))) + (define-public r-jsonlite (package (name "r-jsonlite") @@ -5498,6 +5520,81 @@ freedom to design figures for better understanding complex patterns behind multi-dimensional data.") (license license:gpl2+))) +(define-public r-ctrdata + (package + (name "r-ctrdata") + (version "1.11.1") + (source (origin + (method url-fetch) + (uri (cran-uri "ctrdata" version)) + (sha256 + (base32 + "076v3bll8s6m61wcbwgrgrm34g0wa7gsc90mbwxwap1xfxyzjjsg")))) + (properties `((upstream-name . "ctrdata"))) + (build-system r-build-system) + (propagated-inputs + (list r-clipr + r-curl + r-dplyr + r-httr + r-jsonlite + r-lubridate + r-nodbi + r-rvest + r-stringi + r-xml2)) + (native-inputs (list r-r-rsp)) + (home-page "https://cran.r-project.org/package=ctrdata") + (synopsis "Retrieve and analyze clinical trials in public registers") + (description + "This package provides a system for querying, retrieving and analyzing +protocol- and results-related information on clinical trials from three public +registers, the European Union Clinical Trials Register (EUCTR), +ClinicalTrials.gov (CTGOV) and the ISRCTN. Trial information is downloaded, +converted and stored in a database. Functions are included to identify +deduplicated records, to easily find and extract variables (fields) of +interest even from complex nesting as used by the registers, and to update +previous queries. The package can be used for meta-analysis and +trend-analysis of the design and conduct as well as for results of clinical +trials.") + (license license:expat))) + +(define-public r-ctrialsgov + (package + (name "r-ctrialsgov") + (version "0.2.5") + (source (origin + (method url-fetch) + (uri (cran-uri "ctrialsgov" version)) + (sha256 + (base32 + "0hdh1fdfaja8amf7fkvk1c6yif703132bvacq0j9pk5jr97czgpw")))) + (properties `((upstream-name . "ctrialsgov"))) + (build-system r-build-system) + (propagated-inputs + (list r-dbi + r-dplyr + r-ggplot2 + r-htmlwidgets + r-lubridate + r-matrix + r-plotly + r-purrr + r-rlang + r-stringi + r-tibble)) + (native-inputs (list r-knitr)) + (home-page "https://cran.r-project.org/package=ctrialsgov") + (synopsis + "Query data from U.S. National Library of Medicine's Clinical Trials Database") + (description + "This package provides tools to query the U.S. National Library of +Medicine's Clinical Trials database. Functions are provided for a variety of +techniques for searching the data using range queries, categorical filtering, +and by searching for full-text keywords. Minimal graphical tools are also +provided for interactively exploring the constructed data.") + (license license:expat))) + (define-public r-powerlaw (package (name "r-powerlaw") @@ -12217,6 +12314,34 @@ functions also support labelled data, and all integrate seamlessly into a tidyverse workflow.") (license license:gpl3))) +(define-public r-nodbi + (package + (name "r-nodbi") + (version "0.9.1") + (source (origin + (method url-fetch) + (uri (cran-uri "nodbi" version)) + (sha256 + (base32 + "1hn0wy2ry9l3wwqrshmf82cxigkm16wycwprv458bcvb5k6ayy5m")))) + (properties `((upstream-name . "nodbi"))) + (build-system r-build-system) + (propagated-inputs + (list r-dbi + r-jqr + r-jsonify + r-jsonlite + r-stringi + r-uuid)) + (home-page "https://docs.ropensci.org/nodbi/") + (synopsis "NoSQL database connector") + (description + "This is a package for simplified document database access and +manipulation, providing a common API across supported NoSQL databases +Elasticsearch, CouchDB, MongoDB as well as SQLite/JSON1, PostgreSQL, and +DuckDB.") + (license license:expat))) + (define-public r-nortest (package (name "r-nortest") |