diff options
Diffstat (limited to 'gnu/packages/python-xyz.scm')
| -rw-r--r-- | gnu/packages/python-xyz.scm | 390 |
1 files changed, 257 insertions, 133 deletions
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm index a4c8c0bc29..623f619ade 100644 --- a/gnu/packages/python-xyz.scm +++ b/gnu/packages/python-xyz.scm @@ -187,6 +187,7 @@ #:use-module (gnu packages libevent) #:use-module (gnu packages libffi) #:use-module (gnu packages libidn) + #:use-module (gnu packages libusb) #:use-module (gnu packages linux) #:use-module (gnu packages llvm) #:use-module (gnu packages man) @@ -1515,14 +1516,14 @@ approximate nearest neighbor search with Python bindings.") (define-public python-sh (package (name "python-sh") - (version "1.12.14") + (version "1.14.2") (source (origin (method url-fetch) (uri (pypi-uri "sh" version)) (sha256 (base32 - "1z2hx357xp3v4cv44xmqp7lli3frndqpyfmpbxf7n76h7s1zaaxm")))) + "03gyss1rhj4in7pgysg4q0hxp3230whinlpy1532ljs99lrx0ywx")))) (build-system python-build-system) (arguments '(#:phases @@ -2071,6 +2072,30 @@ abstractions to different hardware devices, and a suite of utilities for sending and receiving messages on a CAN bus.") (license license:lgpl3+))) +(define-public python-canopen + (package + (name "python-canopen") + (version "2.0.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "canopen" version)) + (sha256 + (base32 "1nb543wb37kj95v6bhh272lm5gkpi41q3pnsl1fxlyizm2gamj5w")))) + (build-system python-build-system) + (native-inputs (list python-packaging)) + (propagated-inputs (list python-can)) + (home-page "https://github.com/christiansandberg/canopen") + (synopsis "CANopen stack implementation") + (description + "This package provides a Python implementation of the +@uref{https://www.can-cia.org/canopen/,CANopen standard} for +@acronym{CANs, controller-area networks}. The aim of the project is to +support the most common parts of the CiA 301 standard in a simple +Pythonic interface. It is mainly targeted for testing and automation +tasks rather than a standard compliant master implementation.") + (license license:expat))) + (define-public python-caniusepython3 (package (name "python-caniusepython3") @@ -3424,6 +3449,42 @@ compare, diff, and patch JSON and JSON-like structures in Python.") "Jsonschema is an implementation of JSON Schema for Python.") (license license:expat))) +;;; TODO: Make the default python-jsonschema on core-updates +(define-public python-jsonschema-next + (package + (inherit python-jsonschema) + (version "4.5.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "jsonschema" version)) + (sha256 + (base32 "1z0x22691jva7lwfcfh377jdmlz68zhiawxzl53k631l34k8hvbw")))) + (arguments + (substitute-keyword-arguments (package-arguments python-jsonschema) + ((#:phases phases) + #~(modify-phases #$phases + ;; XXX: PEP 517 manual build/install procedures copied from + ;; python-isort. + (replace 'build + (lambda _ + ;; ZIP does not support timestamps before 1980. + (setenv "SOURCE_DATE_EPOCH" "315532800") + (invoke "python" "-m" "build" "--wheel" "--no-isolation" "."))) + (replace 'install + (lambda* (#:key outputs #:allow-other-keys) + (let ((whl (car (find-files "dist" "\\.whl$")))) + (invoke "pip" "--no-cache-dir" "--no-input" + "install" "--no-deps" "--prefix" #$output whl)))))))) + (native-inputs (list python-pypa-build + python-setuptools-scm + python-twisted)) + (propagated-inputs + (list python-attrs + python-importlib-metadata + python-pyrsistent + python-typing-extensions)))) + (define-public python-schema (package (name "python-schema") @@ -5601,24 +5662,27 @@ readable format.") (define-public python-pygit2 (package (name "python-pygit2") - (version "1.9.1") + (version "1.9.2") (source (origin (method url-fetch) (uri (pypi-uri "pygit2" version)) (sha256 - (base32 "1jdr6z1il03nifwgpcdf95w6xzzbfzdkcqq5dcqjaa0rnv1pjr7g")))) + (base32 "068bwhirigbh2435abyv4shdxgxvyfqf4dxfmhd4hihivwrl9290")))) (build-system python-build-system) (arguments - '(#:tests? #f)) ; tests don't run correctly in our environment + `(#:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-v"))))))) (propagated-inputs (list python-cached-property python-cffi libgit2)) (native-inputs (list python-pytest)) (home-page "https://github.com/libgit2/pygit2") (synopsis "Python bindings for libgit2") - (description "Pygit2 is a set of Python bindings to the libgit2 shared -library, libgit2 implements Git plumbing.") + (description "Pygit2 is a set of Python bindings to the libgit2 shared library.") ;; GPL2.0 only, with linking exception. (license license:gpl2))) @@ -6407,21 +6471,22 @@ a simple netcat replacement with chaining support.") (define-public python-pycodestyle (package (name "python-pycodestyle") - (version "2.7.0") + (version "2.8.0") (source (origin (method url-fetch) (uri (pypi-uri "pycodestyle" version)) (sha256 (base32 - "1vqwmzmjdv331kmfq3q9j3as2x7r2r49lf83r9w4147pdg8c32f3")))) + "0zxyrg8029lzjhima6l5nk6y0z6lm5wfp9qchz3s33j3xx3mipgd")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases (replace 'check - (lambda _ - (invoke "pytest" "-vv")))))) + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv"))))))) (native-inputs (list python-pytest)) (home-page "https://pycodestyle.readthedocs.io/") @@ -10015,17 +10080,16 @@ PEP 8.") (define-public python-pep8-naming (package (name "python-pep8-naming") - (version "0.12.0") + (version "0.13.0") (source (origin (method url-fetch) (uri (pypi-uri "pep8-naming" version)) (sha256 (base32 - "04kyh9hkpyc8jzj16d1kkk29b5n8miqdvbs0zm035n1z5z5kx6hz")))) + "1dc0b6xw1cxp01v9zsv4ryk49rfs1lngfpvzsixgp8b7z3ffcf4z")))) (build-system python-build-system) - (propagated-inputs - (list python-flake8 python-flake8-polyfill)) + (propagated-inputs (list python-flake8)) (home-page "https://github.com/PyCQA/pep8-naming") (synopsis "Check PEP-8 naming conventions") (description @@ -10101,14 +10165,14 @@ file (e.g. @file{PKG-INFO}).") (define-public python-pyflakes (package (name "python-pyflakes") - (version "2.3.1") + (version "2.4.0") (source (origin (method url-fetch) (uri (pypi-uri "pyflakes" version)) (sha256 (base32 - "1ny10364ciqh4ripasj4zzv4145l21l3s85m3qlrvfq5pk58xg7m")))) + "0k5jn8jpxni264wxf6cc3xcd1qckc0pww30bsd77mwzdf8l5ra05")))) (build-system python-build-system) (home-page "https://github.com/PyCQA/pyflakes") (synopsis "Passive checker of Python programs") @@ -10152,23 +10216,26 @@ cyclomatic complexity of Python source code.") (define-public python-flake8 (package (name "python-flake8") - (version "3.9.1") + (version "4.0.1") (source (origin (method url-fetch) (uri (pypi-uri "flake8" version)) (sha256 (base32 - "0y732h02n2aih8gzyfj4bbhg4jgahyv84mjwfindk2g6w45rka0s")))) + "03c7mnk34wfz7a0m5zq0273y94awz69fy5iww8alh4a4v96h6vl0")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases (replace 'check - (lambda* (#:key inputs outputs #:allow-other-keys) - (add-installed-pythonpath inputs outputs) - (invoke "pytest" "-v")))))) - (propagated-inputs (list python-pycodestyle python-entrypoints - python-pyflakes python-mccabe)) - (native-inputs (list python-mock python-pytest)) + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-v"))))))) + (propagated-inputs + (list python-entrypoints + python-mccabe + python-pycodestyle + python-pyflakes)) + (native-inputs (list python-pytest)) (home-page "https://gitlab.com/pycqa/flake8") (synopsis "The modular source code checker: pep8, pyflakes and co") (description @@ -10281,40 +10348,6 @@ the same line (which can be introduced by the code formatting tool Black), or unnecessary plus operators for explicit string literal concatenation.") (license license:expat))) -(define-public python-flake8-polyfill - (package - (name "python-flake8-polyfill") - (version "1.0.2") - (source - (origin - (method url-fetch) - (uri (pypi-uri "flake8-polyfill" version)) - (sha256 - (base32 - "1nlf1mkqw856vi6782qcglqhaacb23khk9wkcgn55npnjxshhjz4")))) - (build-system python-build-system) - (arguments - '(#:phases - (modify-phases %standard-phases - (replace 'check - (lambda _ - ;; Be compatible with Pytest 4: - ;; https://gitlab.com/pycqa/flake8-polyfill/merge_requests/7 - (substitute* "setup.cfg" - (("\\[pytest\\]") - "[tool:pytest]")) - (invoke "py.test" "-v")))))) - (propagated-inputs - (list python-flake8)) - (native-inputs - (list python-mock python-pep8 python-pycodestyle python-pytest)) - (home-page "https://gitlab.com/pycqa/flake8-polyfill") - (synopsis "Polyfill package for Flake8 plugins") - (description - "This package that provides some compatibility helpers for Flake8 -plugins that intend to support Flake8 2.x and 3.x simultaneously.") - (license license:expat))) - (define-public python-flake8-print (package (name "python-flake8-print") @@ -10996,13 +11029,13 @@ third-party code.") (define-public python-msgpack (package (name "python-msgpack") - (version "1.0.3") + (version "1.0.4") (source (origin (method url-fetch) (uri (pypi-uri "msgpack" version)) (sha256 (base32 - "07m84yisf8m6gr68ip9v6vzxax7kqbn8qxg7ir18clk1jgxwgzai")))) + "0pqzy1zclyhd42gfibhkcqymbspy5a6v421g87mh40h3iz0nkn7m")))) (build-system python-build-system) (arguments `(#:modules ((guix build utils) @@ -12427,6 +12460,13 @@ Python.") (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'set-version + ;; for reproducible builds, otherwise python-debian + ;; generates a _version.py including the date + (lambda _ + (copy-file "lib/debian/_version.py.in" "lib/debian/_version.py") + (substitute* "lib/debian/_version.py" + (("__CHANGELOG_VERSION__") ,version)))) (add-after 'unpack 'remove-debian-specific-tests ;; python-apt, apt and dpkg are not yet available in guix, ;; and these tests heavily depend on them. @@ -13498,17 +13538,6 @@ for atomic file system operations.") (home-page "https://github.com/untitaker/python-atomicwrites") (license license:expat))) -(define-public python-atomicwrites-1.4 - (package - (inherit python-atomicwrites) - (version "1.4.0") - (source (origin - (method url-fetch) - (uri (pypi-uri "atomicwrites" version)) - (sha256 - (base32 - "0yla2svfhfqrcj8qbyqzx7wi4jy0dwcxvlkg0k3zjd54s5m3jw5f")))))) - (define-public python-qstylizer (package (name "python-qstylizer") @@ -13862,6 +13891,25 @@ to the Python ecosystem.") "Promises/A+ implementation for Python") (license license:expat))) +(define-public python-progress + (package + (name "python-progress") + (version "1.6") + (source + (origin + (method url-fetch) + (uri (pypi-uri "progress" version)) + (sha256 + (base32 "1k9lpb7lqr6mywpnqcz71y6qny54xlgprdp327za2gy0nnc6xj69")))) + (build-system python-build-system) + (home-page "http://github.com/verigak/progress/") + (synopsis "Progress reporting bars for Python") + (description "This Python package provides progress reporting for visual +of progress of long running operations. There are multiple choices of +progress bars and spinners, with customizable options, such as width, fill +character, and suffix.") + (license license:isc))) + (define-public python-progressbar2 (package (name "python-progressbar2") @@ -15495,20 +15543,33 @@ respectively.") (define-public python-rope (package (name "python-rope") - (version "0.19.0") + (version "1.1.1") (source (origin (method url-fetch) (uri (pypi-uri "rope" version)) (sha256 (base32 - "1nlhkmsfvn2p1msrmwqnypnvr993alzawnpc1605q7rfad3xgrk4")))) + "0bkzwkllxxdxd3w70xiy137lqvnlmmaplsc2ya3s23ss4kq8y10k")))) (build-system python-build-system) + (arguments + (list #:phases + `(modify-phases %standard-phases + (add-after 'unpack 'disable-broken-test + (lambda _ + (substitute* "ropetest/contrib/autoimporttest.py" + (("def test_search_module") + "def __notest_search_module") + (("def test_search_submodule") + "def __notest_search_submodule"))))))) + (native-inputs + (list python-pytest-timeout + python-pytest)) (home-page "https://github.com/python-rope/rope") (synopsis "Refactoring library for Python") (description "Rope is a refactoring library for Python. It facilitates the renaming, moving and extracting of attributes, functions, modules, fields -and parameters in Python 2 source code. These refactorings can also be applied +and parameters in Python source code. These refactorings can also be applied to occurrences in strings and comments.") (license license:lgpl3+))) @@ -16078,25 +16139,14 @@ implementation has been adapted, improved, and fixed from Molten.") (define-public python-shellingham (package (name "python-shellingham") - (version "1.3.2") + (version "1.4.0") (source (origin (method url-fetch) (uri (pypi-uri "shellingham" version)) (sha256 - (base32 "07kmia2hvd2q7wik89m82hig9mqr2faynvy38vxq5fm0ps11jv2p")))) + (base32 "07hpndvcv9mf9hp54b4apzpwzmzfzl8ryaacsfdq4139im2w4ma8")))) (build-system python-build-system) - (arguments - `(#:phases - (modify-phases %standard-phases - (add-after 'unpack 'restore-setup.py - ;; setup.py will return in the next release. - ;; <https://github.com/sarugaku/shellingham/issues/33> - (lambda _ - (with-output-to-file "setup.py" - (lambda _ - (display "from setuptools import setup\nsetup()\n"))) - #t))))) (home-page "https://github.com/sarugaku/shellingham") (synopsis "Tool to detect surrounding shell") (description @@ -16975,6 +17025,91 @@ as well.") @end itemize") (license license:bsd-3))) +(define-public python-exodriver + (package + (name "python-exodriver") + (version "2.6.0") + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/labjack/exodriver") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1ikjz8147p14s814yabdq821y691klnr2yg54zgsymcc97kvwp2q")))) + (outputs (list "out" + "doc")) ;544 KiB of examples + (build-system gnu-build-system) + (arguments + (list + #:tests? #f ;no test suite + #:make-flags #~(list (string-append "CC=" #$(cc-for-target)) + (string-append "PREFIX=" #$output) + "RUN_LDCONFIG=0" + "LINK_SO=1") + #:phases + #~(modify-phases %standard-phases + (delete 'configure) + (replace 'build + (lambda* (#:key make-flags #:allow-other-keys #:rest args) + (with-directory-excursion "liblabjackusb" + (apply (assoc-ref %standard-phases 'build) + `(,@args #:make-flags ,make-flags))))) + (replace 'install + (lambda* (#:key make-flags #:allow-other-keys #:rest args) + (with-directory-excursion "liblabjackusb" + (apply (assoc-ref %standard-phases 'install) + `(,@args #:make-flags ,make-flags))) + ;; Install udev rules. + (install-file "90-labjack.rules" + (string-append #$output "/lib/udev/rules.d")) + ;; Install examples. + (let ((doc (string-append #$output:doc "/share/doc/" #$name))) + (mkdir-p doc) + (copy-recursively "examples" + (string-append doc "/examples")))))))) + (inputs (list libusb)) + (home-page "https://github.com/labjack/exodriver") + (synopsis "USB driver for LabJack data acquisition instruments") + (description "This package provides @code{liblabjackusb}, a USB library for low-level +communication with the U3, U6, UE9, Digit, T4 and T7 LabJack data acquisition +instruments. A udev rule is also included to allow unprivileged users to +communicate with the instruments via USB.") + (license license:expat))) ;see README + +(define-public python-labjack + (package + (name "python-labjack") + (version "2.0.4") + (source (origin + (method url-fetch) + (uri (pypi-uri "LabJackPython" version)) + (sha256 + (base32 + "013bjqdi05vlbdqprr6kqi8gs4qhqc7rnyp1klw8k6fng77rpdzz")))) + (build-system python-build-system) + (arguments + (list + #:tests? #f ;no test suite + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'patch-liblabjackusb.so + (lambda* (#:key inputs #:allow-other-keys) + (substitute* (find-files "." "\\.py$") + (("ctypes.CDLL\\(\"liblabjackusb.so\"") + (format #f "ctypes.CDLL(~s" + (search-input-file inputs + "lib/liblabjackusb.so"))))))))) + ;; exodriver is provided as a regular input, as only its shared object is + ;; used, not its Python API. + (inputs (list python-exodriver)) + (home-page "https://labjack.com/support/software/examples/ud/labjackpython") + (synopsis "Python library for LabJack U3, U6, UE9 and U12") + (description "This Python library allows communicating with the U3, U6, +UE9 and U12 LabJack data acquisition (DAQ) modules.") + (license license:expat))) ;see setup.py + (define-public python-kivy-garden (package (name "python-kivy-garden") @@ -18909,14 +19044,14 @@ while only declaring the test-specific fields.") (define-public python-radon (package (name "python-radon") - (version "4.1.0") + (version "5.1.0") (source (origin (method url-fetch) (uri (pypi-uri "radon" version)) (sha256 (base32 - "0vfxxzbnz5lxfvp0yxp35g6c8qqnnbhi4dm7shkm1d3d4192q22n")))) + "1vmf56zsf3paa1jadjcjghiv2kxwiismyayq42ggnqpqwm98f7fb")))) (build-system python-build-system) (arguments `(#:phases (modify-phases %standard-phases @@ -18930,10 +19065,8 @@ while only declaring the test-specific fields.") (replace 'check (lambda _ (invoke "python" "radon/tests/run.py")))))) - (propagated-inputs - (list python-colorama python-flake8-polyfill python-mando)) - (native-inputs - (list python-pytest python-pytest-mock)) + (propagated-inputs (list python-colorama python-mando)) + (native-inputs (list python-pytest python-pytest-mock)) (home-page "https://radon.readthedocs.org/") (synopsis "Code Metrics in Python") (description "Radon is a Python tool which computes various code metrics. @@ -19659,41 +19792,6 @@ complete rewrite in Cython to attempt to increase the performance over the pure Python module.") (license license:bsd-3))) -(define-public python-xenon - (package - (name "python-xenon") - (version "0.7.0") - (source - (origin - (method url-fetch) - (uri (pypi-uri "xenon" version)) - (sha256 - (base32 - "0nv207ql2wmh9q62503np056c4vf1c1hlsi5cvv5p5kx574k6r2y")))) - (build-system python-build-system) - (native-inputs - (list python-pyyaml python-radon python-requests python-flake8 - python-tox)) - (arguments - `(#:tests? #f ;test suite not shipped with the PyPI archive - #:phases - (modify-phases %standard-phases - (add-before 'build 'patch-test-requirements - (lambda _ - ;; Remove httpretty dependency for tests. - (substitute* "setup.py" - (("httpretty") "")) - #t))))) - (home-page "https://xenon.readthedocs.org/") - (synopsis "Monitor code metrics for Python on your CI server") - (description - "Xenon is a monitoring tool based on Radon. It monitors code complexity. -Ideally, @code{xenon} is run every time code is committed. Through command -line options, various thresholds can be set for the complexity of code. It -will fail (i.e. it will exit with a non-zero exit code) when any of these -requirements is not met.") - (license license:expat))) - (define-public python-pysocks (package (name "python-pysocks") @@ -24279,7 +24377,13 @@ with features similar to the @command{wget} utility.") (build-system python-build-system) (arguments ;; No tests - `(#:tests? #f)) + `(#:tests? #f + #:phases (modify-phases %standard-phases + (add-after 'unpack 'patch-for-pygit2 + (lambda _ + (substitute* "offlate/systems/git.py" + (("pygit2.remote.RemoteCallbacks") + "pygit2.RemoteCallbacks"))))))) (propagated-inputs (list python-android-stringslib python-dateutil @@ -28211,13 +28315,13 @@ to: (define-public nikola (package (name "nikola") - (version "8.1.3") + (version "8.2.2") (source (origin (method url-fetch) (uri (pypi-uri "Nikola" version)) (sha256 - (base32 "1vspzvi4039zgjc93bspqjb384r6c9ksvmidbp8csws2pdbc7sh5")))) + (base32 "1h96y4sfypp2fbqxa8xrqch5f7r3srm2ly222k9w2n143h2spx4m")))) (build-system python-build-system) (propagated-inputs (list python-babel @@ -28253,7 +28357,6 @@ to: (replace 'check (lambda* (#:key tests? #:allow-other-keys) (when tests? - ;;(add-installed-pythonpath inputs outputs) (invoke "pytest" "tests" "--no-cov" "-k" "not test_compiling_markdown[hilite]"))))))) (home-page "https://getnikola.com/") @@ -29315,3 +29418,24 @@ profile. It supports: Currently, Linux is the only platform supported by this library.") (license license:expat))) + +(define-public python-musical-scales + (package + (name "python-musical-scales") + (version "1.0.1") + (source (origin + (method url-fetch) + (uri (pypi-uri "musical-scales" version)) + (sha256 + (base32 + "1ckn8n37i7b65h0i385ycn0w8sg9na0iabz0kmhxxc1wj0hddkw9")))) + (build-system python-build-system) + (native-inputs (list python-wheel)) + (home-page "https://github.com/hmillerbakewell/musical-scale") + (synopsis "Retrieve a scale based on a given mode and starting note") + (description + "Retrieve a scale based on a given mode and starting note. +Information about these scales can be +@url{https://en.wikipedia.org/wiki/List_of_musical_scales_and_modes, found on +Wikipedia}.") + (license license:expat))) |