diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 37 |
1 files changed, 37 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index cb9feda347..f3b67fd2bf 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -9736,6 +9736,43 @@ to identify differentially methylated regions in epigenetic epidemiology studies.") (license license:artistic2.0))) +(define-public r-microbiome + (package + (name "r-microbiome") + (version "1.18.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "microbiome" version)) + (sha256 + (base32 + "1z9arkjp5xszlg07mzb4p163i74jfbd9p4gbwv5syivnpl040k12")))) + (properties `((upstream-name . "microbiome"))) + (build-system r-build-system) + (propagated-inputs + (list r-biostrings + r-compositions + r-dplyr + r-ggplot2 + r-phyloseq + r-reshape2 + r-rtsne + r-scales + r-tibble + r-tidyr + r-vegan)) + (native-inputs (list r-knitr)) + (home-page "https://microbiome.github.io/microbiome/") + (synopsis "Tools for microbiome analysis") + (description + "This package facilitates phyloseq exploration and analysis of taxonomic +profiling data. This package provides tools for the manipulation, statistical +analysis, and visualization of taxonomic profiling data. In addition to +targeted case-control studies, microbiome facilitates scalable exploration of +population cohorts. This package supports the independent phyloseq data +format and expands the available toolkit in order to facilitate the +standardization of the analyses and the development of best practices.") + (license license:bsd-2))) + (define-public r-milor (package (name "r-milor") |