diff options
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 34 |
1 files changed, 34 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1488252f61..65ce365eef 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -5371,6 +5371,40 @@ change point detection.") manipulation of flow cytometry data.") (license license:artistic2.0))) +(define-public r-ggcyto + (package + (name "r-ggcyto") + (version "1.14.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "ggcyto" version)) + (sha256 + (base32 + "165qszvy5z176h1l3dnjb5dcm279b6bjl5n5gzz8wfn4xpn8anc8")))) + (properties `((upstream-name . "ggcyto"))) + (build-system r-build-system) + (propagated-inputs + `(("r-data-table" ,r-data-table) + ("r-flowcore" ,r-flowcore) + ("r-flowworkspace" ,r-flowworkspace) + ("r-ggplot2" ,r-ggplot2) + ("r-gridextra" ,r-gridextra) + ("r-ncdfflow" ,r-ncdfflow) + ("r-plyr" ,r-plyr) + ("r-rcolorbrewer" ,r-rcolorbrewer) + ("r-rlang" ,r-rlang) + ("r-scales" ,r-scales))) + (home-page "https://github.com/RGLab/ggcyto/issues") + (synopsis "Visualize Cytometry data with ggplot") + (description + "With the dedicated fortify method implemented for @code{flowSet}, +@code{ncdfFlowSet} and @code{GatingSet} classes, both raw and gated flow +cytometry data can be plotted directly with ggplot. The @code{ggcyto} wrapper +and some custom layers also make it easy to add gates and population +statistics to the plot.") + (license license:artistic2.0))) + (define-public r-flowsom (package (name "r-flowsom") |