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2022-01-05gnu: r-tinytex: Update to 0.36....* gnu/packages/cran.scm (r-tinytex): Update to 0.36. Ricardo Wurmus
2022-01-05gnu: r-xfun: Update to 0.29....* gnu/packages/cran.scm (r-xfun): Update to 0.29. Ricardo Wurmus
2022-01-05gnu: r-venndiagram: Update to 1.7.1....* gnu/packages/cran.scm (r-venndiagram): Update to 1.7.1. Ricardo Wurmus
2022-01-05gnu: r-hardyweinberg: Update to 1.7.4....* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.7.4. [propagated-inputs]: Add r-nnet. Ricardo Wurmus
2022-01-05gnu: r-mice: Update to 3.14.0....* gnu/packages/cran.scm (r-mice): Update to 3.14.0. [propagated-inputs]: Add r-withr. Ricardo Wurmus
2022-01-05gnu: r-broom: Update to 0.7.11....* gnu/packages/cran.scm (r-broom): Update to 0.7.11. Ricardo Wurmus
2022-01-05gnu: r-rmysql: Update to 0.10.23....* gnu/packages/cran.scm (r-rmysql): Update to 0.10.23. Ricardo Wurmus
2022-01-05gnu: r-dimred: Update to 0.2.4....* gnu/packages/cran.scm (r-dimred): Update to 0.2.4. [native-inputs]: Add r-knitr. Ricardo Wurmus
2022-01-05gnu: r-progressr: Update to 0.10.0....* gnu/packages/cran.scm (r-progressr): Update to 0.10.0. Ricardo Wurmus
2022-01-05gnu: r-suppdists: Update to 1.1-9.7....* gnu/packages/cran.scm (r-suppdists): Update to 1.1-9.7. Ricardo Wurmus
2022-01-05gnu: r-pkgload: Update to 1.2.4....* gnu/packages/cran.scm (r-pkgload): Update to 1.2.4. Ricardo Wurmus
2022-01-05gnu: r-pkgbuild: Update to 1.3.1....* gnu/packages/cran.scm (r-pkgbuild): Update to 1.3.1. Ricardo Wurmus
2022-01-05gnu: r-glue: Update to 1.6.0....* gnu/packages/cran.scm (r-glue): Update to 1.6.0. Ricardo Wurmus
2022-01-05gnu: r-ape: Update to 5.6....* gnu/packages/cran.scm (r-ape): Update to 5.6. Ricardo Wurmus
2022-01-05gnu: r-shadowtext: Update to 0.1.0....* gnu/packages/cran.scm (r-shadowtext): Update to 0.1.0. Ricardo Wurmus
2022-01-05gnu: r-ggpmisc: Update to 0.4.5....* gnu/packages/cran.scm (r-ggpmisc): Update to 0.4.5. Ricardo Wurmus
2022-01-05gnu: r-ggpp: Update to 0.4.3....* gnu/packages/cran.scm (r-ggpp): Update to 0.4.3. Ricardo Wurmus
2022-01-05gnu: r-v8: Update to 4.0.0....* gnu/packages/cran.scm (r-v8): Update to 4.0.0. Ricardo Wurmus
2022-01-05gnu: r-rticles: Update to 0.22....* gnu/packages/cran.scm (r-rticles): Update to 0.22. Ricardo Wurmus
2022-01-05gnu: r-datawizard: Update to 0.2.2....* gnu/packages/cran.scm (r-datawizard): Update to 0.2.2. Ricardo Wurmus
2022-01-05gnu: r-brio: Update to 1.1.3....* gnu/packages/cran.scm (r-brio): Update to 1.1.3. Ricardo Wurmus
2022-01-05gnu: r-httpuv: Update to 1.6.4....* gnu/packages/cran.scm (r-httpuv): Update to 1.6.4. * gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch: Adjust to version 1.6.4. Ricardo Wurmus
2022-01-05gnu: Add r-densestbayes....* gnu/packages/cran.scm (r-densestbayes): New variable. Ricardo Wurmus
2022-01-05gnu: Add r-matrixextra....* gnu/packages/cran.scm (r-matrixextra): New variable. Ricardo Wurmus
2022-01-05gnu: r-activedriverwgs: Update to 1.0.3....* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.0.3. Ricardo Wurmus
2022-01-05gnu: r-activedriverwgs: Update to 1.1.2....* gnu/packages/bioconductor.scm (r-activedriverwgs): Update to 1.1.2. [propagated-inputs]: Add r-bsgenome-hsapiens-ucsc-hg38, r-bsgenome-mmusculus-ucsc-mm9, and r-bsgenome-mmusculus-ucsc-mm10. Ricardo Wurmus
2022-01-05gnu: r-valr: Update to 0.6.4....* gnu/packages/cran.scm (r-valr): Move from here... * gnu/packages/bioconductor.scm (r-valr): ...to here. Update to 0.6.4. [propagated-inputs]: Add r-rtracklayer. Ricardo Wurmus
2022-01-05gnu: r-openssl: Use openssl instead of libressl....* gnu/packages/statistics.scm (r-openssl)[arguments]: Add phase to disable versioned linking. [inputs]: Replace libressl with openssl. Ricardo Wurmus
2022-01-05gnu: r-openssl: Update to 1.4.6....* gnu/packages/statistics.scm (r-openssl): Update to 1.4.6. Ricardo Wurmus
2022-01-05guix/upstream: Let changed-inputs support the new input lists....* guix/upstream.scm (changed-inputs): Add match clauses for new-style input lists. Ricardo Wurmus
2022-01-05tests: Add failing tests for changed-inputs on new style inputs....* tests/upstream.scm ("changed-inputs returns changes to plain input list", "changed-inputs returns changes to all plain input lists"): New tests. Ricardo Wurmus
2022-01-05tests: Add tests for changed-inputs on old-style inputs....All these tests pass, because they only test the old-style input alists with labels. * tests/upstream.scm ("changed-inputs returns no changes", "changed-inputs returns changes to labelled input list", "changed-inputs returns changes to all labelled input lists"): New tests. Ricardo Wurmus
2022-01-05gnu: musescore: Use new package style....* gnu/packages/music.scm (musescore)[source]<snippet>: Remove trailing #T. [inputs]: Remove labels. Nicolas Goaziou
2022-01-05gnu: emacs-helm-cider: Update to 0.5.0....* gnu/packages/emacs-xyz.scm (emacs-helm-cider): Update to 0.5.0. Nicolas Goaziou
2022-01-05gnu: emacs-emms: Update to 8....* gnu/packages/emacs-xyz.scm (emacs-emms): Update to 8. Nicolas Goaziou
2022-01-05gnu: python-django@2.2: Update hash....PyPI is serving a different tarball from the official home page, where this packager had downloaded it: <https://code.djangoproject.com/ticket/33411>. This is a follow-up to commit ad35d8c017fe5ddfb05341a90e171f36e9785526. * gnu/packages/django.scm (python-django-2.2)[source]: Update checksum. Marius Bakke
2022-01-05gnu: python-django@2.2: Update to 2.2.26 [security fixes]....This release fixes CVE-2021-45115, CVE-2021-45116, and CVE-2021-45452. * gnu/packages/django.scm (python-django-2.2): Update to 2.2.26. Marius Bakke
2022-01-05gnu: python-django@3.2: Update to 3.2.11 [security fixes]....This release fixes CVE-2021-45115, CVE-2021-45116, and CVE-2021-45452. * gnu/packages/django.scm (python-django-3.2): Update to 3.2.11. Marius Bakke
2022-01-05gnu: python-django: Update to 4.0.1 [security fixes]....This release fixes CVE-2021-45115, CVE-2021-45116, and CVE-2021-45452. * gnu/packages/django.scm (python-django-4.0): Update to 4.0.1. Marius Bakke
2022-01-05gnu: uBlock Origin: Update to 1.40.4....* gnu/packages/browser-extensions.scm (ublock-origin): Update to 1.40.4. Marius Bakke
2022-01-05gnu: nmrpflash: Update to 0.9.16....* gnu/packages/admin.scm (nmrpflash): Update to 0.9.16. Marius Bakke
2022-01-05gnu: lucene++: Use G-expressions....* gnu/packages/rdf.scm (lucene++)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-01-05gnu: lucene++: Update to 3.0.8....* gnu/packages/rdf.scm (lucene++): Update to 3.0.8. [source]: Add a nice snippet. [arguments]: Don't install the entire gtest suite. Add a custom 'check phase. [inputs]: Add zlib. Tobias Geerinckx-Rice
2022-01-05gnu: hangups: Update to 0.4.16....* gnu/packages/messaging.scm (hangups): Update to 0.4.16. [propagated-inputs]: Upgrade python-protobuf-3.6 to python-protobuf. Tobias Geerinckx-Rice
2022-01-05gnu: amsynth: Use G-expressions....* gnu/packages/music.scm (amsynth)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-01-05gnu: amsynth: Update to 1.12.3....* gnu/packages/music.scm (amsynth): Update to 1.12.3. Tobias Geerinckx-Rice
2022-01-05gnu: moreutils: Use G-expressions....* gnu/packages/moreutils.scm (moreutils)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice
2022-01-05gnu: moreutils: Update to 0.67....* gnu/packages/moreutils.scm (moreutils): Update to 0.67. Tobias Geerinckx-Rice
2022-01-05gnu: nbd: Update to 3.23....* gnu/packages/networking.scm (nbd): Update to 3.23. Tobias Geerinckx-Rice
2022-01-05gnu: itcl: Use G-expressions....* gnu/packages/tcl.scm (itcl)[arguments]: Rewrite as G-expressions. Tobias Geerinckx-Rice