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2022-04-29gnu: Add r-afpt.•••* gnu/packages/cran.scm (r-afpt): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Navid
2022-04-29publish: Send uncached narinfo replies from the main thread.•••Fixes <https://issues.guix.gnu.org/54723>. Reported by Guillaume Le Vaillant <glv@posteo.net>. Regression introduced in f743f2046be2c5a338ab871ae8666d8f6de7440b. With commit f743f2046be2c5a338ab871ae8666d8f6de7440b, responses to pipelined GETs would end up being written concurrently by many threads. Thus the body of those responses could be interleaved and garbled. * guix/scripts/publish.scm: Revert f743f2046be2c5a338ab871ae8666d8f6de7440b. * tests/publish.scm ("/*.narinfo pipeline"): New test. Ludovic Courtès
2022-04-29tests: Avoid starting services to check whether they're running.•••Fixes a regression introduced in the Shepherd 0.9.0 whereby clients can start a service that is already being started, leading to two instances of the process (and usually failure of the second attempt to start it). Partly fixes <https://issues.guix.gnu.org/54786>. Reported by Mathieu Othacehe. * gnu/tests/version-control.scm (run-cgit-test) ["nginx running", "fcgiwrap running"]: Wail for a file/TCP port instead of starting the service. (run-git-http-test)["nginx running"]: Likewise. (run-gitile-test)["nginx running"]: Likewise. Ludovic Courtès
2022-04-29gnu: Add python-flatten-json.•••* gnu/packages/python-xyz.scm (python-flatten-json): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Peter Polidoro
2022-04-29gnu: Add envytools.•••* gnu/packages/hardware.scm (envytools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Petr Hodina
2022-04-29gnu: zsh: Build and install info pages.•••* gnu/packages/shells.scm (zsh)[arguments]: Add 'make-info' and 'install-info' phases. [native-inputs]: Add TEXINFO. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Andrew Tropin
2022-04-29gnu: lensfun: Update to 0.3.3.•••* gnu/packages/photo.scm (lensfun): Update to 0.3.3. [source, homepage]: Update URLs as the project has moved. Signed-off-by: Ludovic Courtès <ludo@gnu.org> John Kehayias
2022-04-29home: shells: Migrate fish to xdg-configuration-files.•••* gnu/home/services/shells.scm (home-fish-service-type): Use new xdg-configuration-files-service-type service. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Bastien Rivière
2022-04-29services: Add missing 'description' fields.•••* gnu/services/databases.scm (postgresql-service-type)[description]: New field. (memcached-service-type)[description]: New field. (mysql-service-type)[description]: New field. (redis-service-type)[description]: New field. * gnu/services/desktop.scm (geoclue-service-type)[description]: New field. (udisks-service-type)[description]: New field. (elogind-service-type)[description]: New field. (account-service-type)[description]: New field. * gnu/services/kerberos.scm (krb5-service-type)[description]: New field. (pam-krb5-service-type)[description]: New field. * gnu/services/lirc.scm (lirc-service-type)[description]: New field. * gnu/services/mail.scm (dovecot-service-type)[description]: New field. (opensmtpd-service-type)[description]: New field. (mail-aliases-service-type)[description]: New field. (exim-service-type)[description]: New field. * gnu/services/monitoring.scm (zabbix-server-service-type)[description]: New field. (zabbix-agent-service-type)[description]: New field. * gnu/services/nfs.scm (rpcbind-service-type)[description]: New field. (pipefs-service-type)[description]: New field. (gss-service-type)[description]: New field. (idmap-service-type)[description]: New field. * gnu/services/spice.scm (spice-vdagent-service-type)[description]: New field. * gnu/services/sysctl.scm (sysctl-service-type)[description]: New field. * gnu/services/virtualization.scm (libvirt-service-type)[description]: New field. (virtlog-service-type)[description]: New field. * gnu/services/vpn.scm (openvpn-server-service-type)[description]: New field. (openvpn-client-service-type)[description]: New field. (wireguard-service-type)[description]: New field. * gnu/services/web.scm (httpd-service-type)[description]: New field. (fcgiwrap-service-type)[description]: New field. (agate-service-type)[description]: New field. [name]: Fix. Ludovic Courtès
2022-04-29gnu: Add urh.•••* gnu/packages/radio.scm (urh): New variable. Co-authored-by: Arun Isaac <arunisaac@systemreboot.net> Guillaume Le Vaillant
2022-04-29gnu: font-gnu-unifont: Update to 14.0.03.•••* gnu/packages/fonts.scm (font-gnu-unifont): Update to 14.0.03. Efraim Flashner
2022-04-29gnu: gama: Update to 2.19.•••* gnu/packages/gps.scm (gama): Update to 2.19. Efraim Flashner
2022-04-29gnu: Add Avizo.•••* gnu/packages/wm.scm (avizo): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Pier-Hugues Pellerin
2022-04-29gnu: openssh: Trust Guix store directory•••* gnu/local.mk (dist_patch_DATA): Add the patch * gnu/packages/patches/openssh-trust-guix-store-directory.patch: Patch it * gnu/packages/ssh.scm (openssh[source]): Use it. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Alexey Abramov
2022-04-29home: services: fish: Fix incorrect ".config" file name.•••This is a followup to 5832d9fb601c7d4ec5380654db2b62b906bc658f. * gnu/home/services/shells.scm (fish-files-service): Change "config/" to ".config/". Signed-off-by: Ludovic Courtès <ludo@gnu.org> Maya
2022-04-28gnu: rust-pyo3: Allow compilation with Criterion 0.3.5.•••Fixes a regression introduced in 2703daf6eb0098ad064a9b6ec64a9ae7b5b35343. * gnu/packages/crates-io.scm (rust-pyo3-0.15)[modules, snippet]: New fields. Ludovic Courtès
2022-04-28gnu: flatpak: Do not leak GDK_PIXBUF_MODULE_FILE into the sandbox.•••Fixes <https://issues.guix.gnu.org/54784>. * gnu/packages/patches/flatpak-unset-gdk-pixbuf-for-sandbox.patch: New file. * gnu/local.mk (dist_patch_DATA): Add corresponding entry. * gnu/packages/package-management.scm (flatpak)[source]: Use patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zhu Zihao
2022-04-28gnu: flatpak: Use G-expressions.•••* gnu/packages/package-management.scm (flatpak): Fix indentation. [arguments]: Use G-expressions. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Zhu Zihao
2022-04-28gnu: Add r-guix-install.•••* gnu/packages/cran.scm (r-guix-install): New variable. Ricardo Wurmus
2022-04-27gnu: mercury: Selectively import match-lambda from ice9 module.•••* gnu/packages/mercury.scm (mercury): Use #:select instead of a comment string for importing match-lambda. Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name> jgart
2022-04-27gnu: linux-libre 4.9: Update to 4.9.312.•••* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.312. (linux-libre-4.9-pristine-source): Update hash. Leo Famulari
2022-04-27gnu: linux-libre 4.14: Update to 4.14.277.•••* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.277. (linux-libre-4.14-pristine-source): Update hash. Leo Famulari
2022-04-27gnu: linux-libre 4.19: Update to 4.19.240.•••* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.240. (linux-libre-4.19-pristine-source): Update hash. Leo Famulari
2022-04-27gnu: linux-libre 5.4: Update to 5.4.191.•••* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.191. (linux-libre-5.4-pristine-source): Update hash. Leo Famulari
2022-04-27gnu: linux-libre 5.10: Update to 5.10.113.•••* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.113. (linux-libre-5.10-pristine-source): Update hash. Leo Famulari
2022-04-27gnu: linux-libre 5.15: Update to 5.15.36.•••* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.36. (linux-libre-5.15-pristine-source): Update hash. Leo Famulari
2022-04-27gnu: linux-libre: Update to 5.17.5.•••* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.5. (linux-libre-5.17-pristine-source): Update hash. Leo Famulari
2022-04-27gnu: conan: Use python-pyyaml@5.•••* gnu/packages/package-management.scm (conan)[propagated-inputs]: Replace python-pyyaml by python-yyaml-5. Signed-off-by: Ludovic Courtès <ludo@gnu.org> zimoun
2022-04-27gnu: docker-compose: Use python-pyyaml@5.•••* gnu/packages/docker.scm (docker-compose)[inputs]: Replace python-pyyaml by python-pyyaml-5. Signed-off-by: Ludovic Courtès <ludo@gnu.org> zimoun
2022-04-27gnu: python-pyyaml: Reintroduce 5.4.•••* gnu/packages/python-xyz.scm (python-pyyaml-5): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org> zimoun
2022-04-27gnu: Add hyfetch.•••* gnu/packages/admin.scm (hyfetch): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Wamm K. D
2022-04-27gnu: Add python-hypy-utils.•••* gnu/packages/python-xyz.scm (python-hypy-utils): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Wamm K. D
2022-04-27gnu: Add r-agilp.•••* gnu/packages/bioconductor.scm (r-agilp): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-27gnu: Add r-aggregatebiovar.•••* gnu/packages/bioconductor.scm (r-aggregatebiovar): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-27gnu: Add r-agdex.•••* gnu/packages/bioconductor.scm (r-agdex): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-27gnu: Add r-affyrnadegradation.•••* gnu/packages/bioconductor.scm (r-affyrnadegradation): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-27gnu: Add r-affixcan.•••* gnu/packages/bioconductor.scm (r-affixcan): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-27gnu: Add r-adsplit.•••* gnu/packages/bioconductor.scm (r-adsplit): New variable. Mădălin Ionel Patrașcu
2022-04-27gnu: Add r-adimpute.•••* gnu/packages/bioconductor.scm (r-adimpute): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-27gnu: Add r-saver.•••* gnu/packages/cran.scm (r-saver): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2022-04-27gnu: git: Update to 2.36.0 [fixes CVE-2022-24765].•••See: https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2022-24765. * gnu/packages/version-control.scm (git): Update to 2.36.0. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Zhu Zihao
2022-04-27gnu: Add python-mike.•••* gnu/packages/python-xyz.scm (python-mike): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Vincent Prat
2022-04-27gnu: Add worklog.•••* gnu/packages/task-management.scm (worklog): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Foo Chuan Wei
2022-04-27gnu: Add wtime.•••* gnu/packages/task-management.scm (wtime): New variable. Signed-off-by: Mathieu Othacehe <othacehe@gnu.org> Foo Chuan Wei
2022-04-27gnu: shotcut: Update to 22.04.25.•••* gnu/packages/video.scm (shotcut): Update to 22.04.25. Vinicius Monego
2022-04-26gnu: emacs-elpher: Update to 3.3.3.•••* gnu/packages/emacs-xyz.scm (emacs-elpher): Update to 3.3.3. Vinicius Monego
2022-04-26gnu: emacs-org-roam: Update to 2.2.2.•••* gnu/packages/emacs-xyz.scm (emacs-org-roam): Update to 2.2.2. Vinicius Monego
2022-04-26gnu: emacs-org-re-reveal: Update to 3.13.0.•••* gnu/packages/emacs-xyz.scm (emacs-org-re-reveal): Update to 3.13.0. Vinicius Monego
2022-04-26gnu: emacs-vertico: Update to 0.23.•••* gnu/packages/emacs-xyz.scm (emacs-vertico): Update to 0.23. Vinicius Monego
2022-04-26gnu: emacs-consult: Update to 0.17.•••* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.17. Vinicius Monego