| Age | Commit message (Expand) | Author |
|---|
| 2023-03-21 | gnu: r-intervals: Update to 0.15.3....* gnu/packages/cran.scm (r-intervals): Update to 0.15.3.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-maldiquant: Update to 1.22.1....* gnu/packages/cran.scm (r-maldiquant): Update to 1.22.1.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-metafor: Update to 4.0-0....* gnu/packages/cran.scm (r-metafor): Update to 4.0-0.
[propagated-inputs]: Add r-numderiv.
[native-inputs]: Add r-r-rsp.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-qgraph: Update to 1.9.4....* gnu/packages/cran.scm (r-qgraph): Update to 1.9.4.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-ggfortify: Update to 0.4.16....* gnu/packages/cran.scm (r-ggfortify): Update to 0.4.16.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-sf: Update to 1.0-12....* gnu/packages/cran.scm (r-sf): Update to 1.0-12.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-glmmtmb: Update to 1.1.6....* gnu/packages/cran.scm (r-glmmtmb): Update to 1.1.6.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-fnn: Update to 1.1.3.2....* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.2.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-truncnorm: Update to 1.0-9....* gnu/packages/cran.scm (r-truncnorm): Update to 1.0-9.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-partykit: Update to 1.2-19....* gnu/packages/cran.scm (r-partykit): Update to 1.2-19.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-nmf: Update to 0.26....* gnu/packages/bioconductor.scm (r-nmf): Update to 0.26.
| Ricardo Wurmus |
| 2023-03-21 | gnu: sbcl-history-tree: Update to 0.1.1....* gnu/packages/lisp-xyz.scm (sbcl-history-tree): Update to 0.1.1.
| Pierre Neidhardt |
| 2023-03-21 | gnu: r-singlecellexperiment: Update to 1.20.1....* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.20.1.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-variancepartition: Update to 1.28.9....* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.28.9.
| Ricardo Wurmus |
| 2023-03-21 | gnu: r-biocparallel: Update to 1.32.6....* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.32.6.
| Ricardo Wurmus |
| 2023-03-20 | gnu: Add mygnuhealth....* gnu/packages/medical.scm (mygnuhealth): New variable.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Co-authored-by: Morgan Smith <Morgan.J.Smith@outlook.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
| Petr Hodina |
| 2023-03-20 | gnu: zabbix-agentd: Update to 6.0.14....* gnu/packages/monitoring.scm (zabbix-agentd): Update to 6.0.14.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
| Kaelyn Takata |
| 2023-03-20 | gnu: tesseract-ocr: Use standard TESSDATA_PREFIX....* gnu/packages/ocr.scm (tesseract-ocr-tessdata-fast): Install data to
'share/tessdata' prefix rather than 'share/tesseract-ocr/tessdata'.
(tesseract-ocr) [arguments]: Delete adjust-TESSDATA_PREFIX-macro.
Adjust installation prefix in install-minimal-tessdata phase.
[native-search-paths]: Search for files under share/tessdata directly.
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
| Simon South |
| 2023-03-20 | gnu: emacs-magit-gerrit: Update to 0.4-1.a975215....* gnu/packages/emacs-xyz.scm (emacs-magit-gerrit): Update to 0.4-1.a975215.
| Maxim Cournoyer |
| 2023-03-20 | gnu: emacs-magit: Update to 3.3.0-4.a760dd1....This update resolves a problem where configuring a remote would result in the
error "Symbol’s function definition is void:
transient--with-suspended-override".
* gnu/packages/emacs-xyz.scm (emacs-magit): Update to 3.3.0-4.a760dd1.
| Maxim Cournoyer |
| 2023-03-20 | gnu: emacs-transient: Update to 0.3.7-1.0ae0de4....* gnu/packages/emacs-xyz.scm (emacs-transient): Update to 0.3.7-1.0ae0de4.
[propagated-inputs]: Remove emacs-dash; add emacs-compat.
| Maxim Cournoyer |
| 2023-03-21 | gnu: lepton-eda: Update to 1.9.18-20220529....* gnu/packages/engineering.scm (lepton-eda): Update to 1.9.18-20220529.
[inputs]: Add guile-readline.
[arguments]: Adjust build phase 'fix-dynamic-link; add build phase 'fix-tests.
| Ricardo Wurmus |
| 2023-03-21 | gnu: Add ctrlr....* gnu/packages/music.scm (ctrlr): New variable.
| Ricardo Wurmus |
| 2023-03-20 | gnu: openjdk10: Apply patch again....This partially reverts commit 7636c49b45adb9870cf416c64bde032ec858a820
where the patch was dropped.
* gnu/packages/java.scm (openjdk10)[source]: Apply patch.
| Andreas Enge |
| 2023-03-20 | gnu: Add r-annotationhubdata....* gnu/packages/bioconductor.scm (r-annotationhubdata): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
| Mădălin Ionel Patrașcu |
| 2023-03-20 | gnu: Add r-affylmgui....* gnu/packages/bioconductor.scm (r-affylmgui): New variable.
| Mădălin Ionel Patrașcu |
| 2023-03-20 | gnu: Add r-tkrplot....* gnu/packages/cran.scm (r-tkrplot): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>.
| Mădălin Ionel Patrașcu |
| 2023-03-20 | gnu: Add r-affyplm....* gnu/packages/bioconductor.scm (r-affyplm): New variable.
| Mădălin Ionel Patrașcu |
| 2023-03-20 | gnu: Add r-affyilm....* gnu/packages/bioconductor.scm (r-affyilm): New variable.
| Mădălin Ionel Patrașcu |
| 2023-03-20 | gnu: python-google-api-client: Update to 1.12.8....* gnu/packages/python-web.scm (python-google-api-client): Update to
1.12.8.
[arguments]: Remove custom phase to adjust setup.py.
[native-inputs]: Remove python-oauth2client, python-uritemplate. Move
python-httplib2, python-six ...
[propagated-inputs]: ... here. Add python-google-api-core-1,
python-google-auth-1, python-google-auth-httplib2, python-uritemplate-3.
| Efraim Flashner |
| 2023-03-20 | gnu: python-googleapis-common-protos: Update to 1.56.4....* gnu/packages/python-web.scm (python-googleapis-common-protos): Update
to 1.56.4.
[arguments]: Enable test suite.
| Efraim Flashner |
| 2023-03-20 | gnu: Add python-google-api-core-1....* gnu/packages/python-web.scm (python-google-api-core-1): New variable.
| Efraim Flashner |
| 2023-03-20 | gnu: Add python-google-auth-1....* gnu/packages/python-web.scm (python-google-auth-1): New variable.
| Efraim Flashner |
| 2023-03-20 | gnu: Add python-google-auth-httplib2....* gnu/packages/python-web.scm (python-google-auth-httplib2): New
variable.
| Efraim Flashner |
| 2023-03-20 | gnu: Add python-uritemplate-3....* gnu/packages/python-web.scm (python-uritemplate-3): New variable.
| Efraim Flashner |
| 2023-03-20 | gnu: python-httplib2: Update to 0.15.0....* gnu/packages/python-web.scm (python-httplib2): Update to 0.15.0.
[source]: Download using git.
[arguments]: Add a phase to adjust the test package version
requirements.
[native-inputs]: Add python-flake8, python-future, python-mock,
python-pytest, python-pytest-cov, python-pytest-forked,
python-pytest-randomly, python-pytest-timeout, python-pytest-xdist,
python-six.
[home-page]: Switch to new upstream homepage.
| Efraim Flashner |
| 2023-03-20 | gnu: zig: Increase max-silent-time....* gnu/packages/zig.scm (zig-0.10)[properties]: Set max-silent-time to 3
hours.
| Efraim Flashner |
| 2023-03-20 | gnu: Add transanno....* gnu/packages/bioinformatics.scm (transanno): New variable.
| Ricardo Wurmus |
| 2023-03-20 | gnu: Add rust-autocompress-0.2....* gnu/packages/crates-io.scm (rust-autocompress-0.2): New variable.
| Ricardo Wurmus |
| 2023-03-20 | gnu: Add rust-temp-testdir-0.2....* gnu/packages/crates-io.scm (rust-temp-testdir-0.2): New variable.
| Ricardo Wurmus |
| 2023-03-20 | gnu: Add rust-bio-0.41....* gnu/packages/crates-io.scm (rust-bio-0.41): New variable.
| Ricardo Wurmus |
| 2023-03-20 | gnu: ruby-rugged: Update to 1.6.2-0.6379f23 and enable tests....* gnu/packages/ruby.scm (ruby-rugged): Update to 1.6.2-0.6379f23.
[source]: Fetch via git.
[arguments]: Enable tests. Add #:phases.
[native-inputs]: Add git-minimal/pinned. Remove ruby-minitest and ruby-pry.
| Maxim Cournoyer |
| 2023-03-20 | gnu: python-django-rq: Update to 2.7.0....* gnu/packages/django.scm (python-django-rq): Update to 2.7.0.
[arguments]: Replace django-admin.py with django-admin in check phase.
| Maxim Cournoyer |
| 2023-03-20 | gnu: python-aioredis: Deprecate by python-redis....* gnu/packages/databases.scm (python-aioredis): Mark as deprecated by
python-redis.
| Maxim Cournoyer |
| 2023-03-20 | gnu: python-fakeredis: Update to 2.10.1 and enable tests....* gnu/packages/databases.scm (python-fakeredis): Update to 2.10.1.
[source]: Fetch via git.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests. Add #:phases.
[native-inputs]: New field.
[propagated-inputs]: Remove python-aioredis and python-packaging.
[home-page]: Update URL.
| Maxim Cournoyer |
| 2023-03-20 | gnu: python-redis: Update to 4.5.2 and enable tests....* gnu/packages/databases.scm (python-redis): Update to 4.5.2.
[source]: Fetch from git.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests. Add #:test-flags and #:phases.
[native-inputs]: Add field.
[propagated-inputs]: Add field.
[home-page]: Update URL.
| Maxim Cournoyer |
| 2023-03-20 | gnu: python-hiredis: Update to 2.2.2 and enable tests....* gnu/packages/databases.scm (python-hiredis): Update to 2.2.2.
[source]: Fetch via git and apply patches.
[build-system]: Use pyproject-build-system.
[arguments]: Enable tests. Add #:phases.
[native-inputs]: New field.
[inputs]: Likewise.
* gnu/packages/patches/python-hiredis-fix-header.patch: New file.
* gnu/packages/patches/python-hiredis-use-system-hiredis.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Register them.
| Maxim Cournoyer |
| 2023-03-20 | gnu: hiredis: Update to 1.1.0....* gnu/packages/databases.scm (hiredis): Update to 1.1.0.
| Maxim Cournoyer |
| 2023-03-20 | gnu: redis: Use gexps and streamline....* gnu/packages/databases.scm (redis) [arguments]: Merge the use-correct-tclsh
into the patch-paths phase. Use 'which' instead of assoc-ref. Move
the #:make-flags argument before the #:phases one. Use cc-for-target as the
value of the CC make flag.
[native-inputs]: Move field below arguments.
| Maxim Cournoyer |
| 2023-03-20 | gnu: redis: Update to 7.0.9 [security fixes]....Fixes CVE-2023-25155, CVE-2022-36021 and more; see
https://raw.githubusercontent.com/redis/redis/7.0/00-RELEASENOTES.
* gnu/packages/databases.scm (redis): Update to 7.0.9.
[native-inputs]: Add pkg-config and which.
[arguments]: Add a patch-paths phase. Skip the AOF-related tests.
[properties]: Add a lint-hidden-cve property.
| Maxim Cournoyer |
