Age | Commit message (Collapse) | Author |
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* gnu/packages/bioconductor.scm (r-copynumber): Update to 1.30.0.
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* gnu/packages/bioconductor.scm (r-chipexoqual): Update to 1.14.0.
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* gnu/packages/bioconductor.scm (r-savr): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-destiny): Update to 3.4.0.
[propagated-inputs]: Remove r-nbconvertr.
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* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.8.0.
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* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-dnabarcodes): Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-inspect): Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-plgem): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-rots): Update to 1.18.0.
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* gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
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* gnu/packages/bioconductor.scm (r-goseq): Update to 1.42.0.
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* gnu/packages/bioconductor.scm (r-ctc): Update to 1.64.0.
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* gnu/packages/bioconductor.scm (r-riboseqr): Update to 1.24.0.
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* gnu/packages/bioconductor.scm (r-riboprofiling): Update to 1.20.0.
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* gnu/packages/bioconductor.scm (r-bayseq): Update to 2.24.0.
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* gnu/packages/bioconductor.scm (r-qdnaseq): Update to 1.26.0.
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* gnu/packages/bioconductor.scm (r-cghcall): Update to 2.52.0.
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* gnu/packages/bioconductor.scm (r-cghbase): Update to 1.50.0.
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* gnu/packages/bioconductor.scm (r-marray): Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.24.0.
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* gnu/packages/bioconductor.scm (r-graph): Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-multtest): Update to 2.46.0.
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* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.0.7.
[propagated-inputs]: Add r-apeglm, r-ashr, and r-greylistchip; remove r-edger.
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* gnu/packages/bioconductor.scm (r-greylistchip): New variable.
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* gnu/packages/cran.scm (r-ashr): New variable.
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* gnu/packages/cran.scm (r-mixsqp): New variable.
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* gnu/packages/cran.scm (r-etrunct): New variable.
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* gnu/packages/cran.scm (r-invgamma): New variable.
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* gnu/packages/bioconductor.scm (r-apeglm): New variable.
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* gnu/packages/bioconductor.scm (r-rcppnumerical): New variable.
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* gnu/packages/bioconductor.scm (r-qvalue): Update to 2.22.0.
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* gnu/packages/bioconductor.scm (r-oligo): Update to 1.54.0.
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* gnu/packages/bioconductor.scm (r-oligoclasses): Update to 1.52.0.
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* gnu/packages/bioconductor.scm (r-geneplotter): Update to 1.68.0.
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* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.30.0.
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* gnu/packages/bioconductor.scm (r-regioner): Update to 1.22.0.
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* gnu/packages/bioconductor.scm (r-hpar): Update to 1.32.1.
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* gnu/packages/bioconductor.scm (r-annotate): Update to 1.68.0.
[propagated-inputs]: Remove 'r-rcurl', add 'r-httr'.
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* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.62.0.
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* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.48.0.
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* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.50.0.
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* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.66.0.
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* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.36.0.
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* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.12.0.
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* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.32.0.
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* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.28.0.
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* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.26.0.
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* guix/import/cran.scm (%bioconductor-version): Set to 3.12.
* guix/build-system/r.scm (bioconductor-uri): Update to 3.12.
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