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2023-01-07services: base: Add extra-env support to guix-configuration.Mathieu Othacehe
* gnu/services/base.scm (<guix-configuration>)[extra-env]: New field. (guix-shepherd-service): Honor it. * doc/guix.texi (Base Services): Document it.
2023-01-07gnu: Remove emacs-nadvice as a propagated input.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-compat)[propagated-inputs]: Remove EMACS-NADVICE. * gnu/packages/emacs-xyz.scm (emacs-excorporate)[propagated-inputs]: Remove EMACS-NADVICE. Emacs Nadvice provides a compatibility layer for Emacs < 24.4. Nowadays, Guix provides at leas Emacs 28. This package is not useful. Worse, it can introduce issues with autoloads, as reported in <https://issues.guix.gnu.org/60627>.
2023-01-07gnu: emacs-org-ql: Update to 0.6.3-0.2953352.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-org-ql): Update to 0.6.3-0.2953352. [arguments]: Fix a test. [native-inputs]: Move after arguments field. [propagated-inputs]: Re-order alphabetically. Move after arguments field.
2023-01-07substitutes: Log the failing queries.Mathieu Othacehe
* guix/substitutes.scm (%debug?): New variable. (handle-narinfo-response): Log the failing queries if the %debug? parameter is set.
2023-01-07scripts: publish: Add a custom baking header.Mathieu Othacehe
Log the not-found responses and their reason (baking or not) to stdout. Also send the X-Baking custom header so that the client can be informed of the cause of the failure. * guix/scripts/publish.scm (not-found): Add a baking? argument to add the X-Baking HTTP header to the response if baking is in progress. Also, log the 404 responses to stdout, indicating if it is due to baking or not. (render-narinfo/cached): Pass the baking? argument.
2023-01-07gnu: emacs-citre: Improve synopsis and description.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-citre)[synopsis]: Clarify meaning. [description]: Fix typo.
2023-01-07gnu: emacs-citre: Search proper ctags program.Feng Shu
* gnu/packages/emacs-xyz.scm (emacs-citre)[arguments]<#:phases>: Do not use search-input-file to search ctags, for it will get ctags of emacs-minimal instead of universal-ctags. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-01-07gnu: emacs-company-posframe: Update to 0.7.0.Feng Shu
* gnu/packages/emacs-xyz.scm (emacs-company-posframe): Update to 0.7.0. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-01-07gnu: Add emacs-citre.Feng Shu
* gnu/packages/emacs-xyz.scm (emacs-citre): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-01-07gnu: Add emacs-ebdb-i18n-chn.Feng Shu
* gnu/packages/emacs-xyz.scm (emacs-ebdb-i18n-chn): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-01-07gnu: Add emacs-cal-china-x.Feng Shu
* gnu/packages/emacs-xyz.scm (emacs-cal-china-x): New variable. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-01-07gnu: emacs-pyim-basedict: Install pyim-basedict.pyim file.Feng Shu
* gnu/packages/emacs-xyz.scm (emacs-pyim-basedict) [arguments]<#:include>: Install "pyim-basedict.pyim" file. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
2023-01-07gnu: emacs-inspector: Update to 0.10.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-inspector): Update to 0.10.
2023-01-07gnu: emacs-consult: Update to 0.31.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-consult): Update to 0.31.
2023-01-07gnu: emacs-compat: Update to 29.1.0.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-compat): Update to 29.1.0.1.
2023-01-07gnu: emacs-benchmark-init: Update to 1.1.Nicolas Goaziou
* gnu/packages/emacs-xyz.scm (emacs-benchmark-init): Update to 1.1.
2023-01-06gnu: indi: Update to 1.9.9.Sharlatan Hellseher
* gnu/packages/astronomy.scm (indi): Update to 1.9.9. [arguments]{tests}: Silent test on aarch64-linux system. [inputs]: Add libev. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-06gnu: python-astropy: Update to 5.1.1.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-astropy): Update to 5.1.1. [source]{snippet}: Unbundle wcslib. [arguments]{phases}: preparations: Use all system libraries. [inputs]: Add wcslib. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-06gnu: wcslib: Update to 7.12.Sharlatan Hellseher
* gnu/packages/astronomy.scm (wcslib): Update to 7.12. [arguments]: Use Gexp, enable parallel tests. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-06gnu: python-fitsio: Update to 1.1.8.Sharlatan Hellseher
* gnu/packages/astronomy.scm (python-fitsio): Update to 1.1.8. [arguments]{phases}: skip-bzip2-test remove redundant phase as cfitsio built with bzip2 support. [inputs]: Add curl-minimal. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-06gnu: cfitsio: Build with bzip2 support.Sharlatan Hellseher
* gnu/packages/astronomy.scm (cfitsio): [arguments](configure-flags): Add bzip2 option. [inputs]: Add bzip2. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-06gnu: cfitsio: Update to 4.2.0.Sharlatan Hellseher
Fix build on aarch64-linux as reported in: - https://issues.guix.gnu.org/59323 - https://github.com/rwesson/ALFA/issues/29 The latest version passed build on aarch64-linux system with curl and gfortran enabled. wcslib@7.5 passed build with curl enabled (was marked as failing in cements). * gnu/packages/astronomy.scm (cfitsio): Update to 4.2.0. [arguments]: Use Gexp, enable tests. [arguments](phases): Delete check and add post-install-check phases. [native-inputs]: Add gfortran. [inputs]: Add curl, zlib. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-06doc: cookbook: Remove 404 link to mitpress.mit.edu.Ludovic Courtès
* doc/guix-cookbook.texi (A Scheme Crash Course): Remove 404 link to mitpress.mit.edu.
2023-01-06gnu: guile-email: Update to 0.3.0.Arun Isaac
* gnu/packages/guile-xyz.scm (guile-email): Update to 0.3.0. [native-inputs]: Remove pkg-config and lzip. Add texinfo. [arguments]: Remove GUILE_AUTO_COMPILE=0 make-flag. Add prefix make-flag. Delete configure phase. (guile2.2-email)[arguments]: Add guile_effective_version=2.2 make-flag. * gnu/packages/patches/guile-email-fix-tests.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Unregister it.
2023-01-06gnu: Update guile-syntax-highlight to 0.2.0.David Thompson
* gnu/packages/guile-xyz.scm (guile-syntax-highlight): Update to 0.2.0.
2023-01-06gnu: bbmap: Update to 39.01.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bbmap): Update to 39.01.
2023-01-06gnu: bbmap: Use gexp.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (bbmap)[arguments]: Use gexp.
2023-01-06gnu: nanopolish: Drop input labels.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (nanopolish)[inputs]: Drop labels.
2023-01-06gnu: nanopolish: Update to 0.14.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (nanopolish): Update to 0.14.0. [source]: Update snippet. [arguments]: Use gexp; use cc-for-target; drop #T from build phases. [inputs]: Add minimap2. [native-inputs]: Add cmake-minimal.
2023-01-06gnu: filtlong: Use Python 3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (filtlong)[inputs]: Replace python-2 with python-wrapper.
2023-01-06gnu: filtlong: Use gexp.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (filtlong)[arguments]: Use gexp.
2023-01-06gnu: filtlong: Drop input labels.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (filtlong)[inputs]: Drop labels.
2023-01-06gnu: filtlong: Remove trailing #T from build phases.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (filtlong)[arguments]: Remove trailing #T.
2023-01-06gnu: ngless: Use gexp.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngless)[arguments]: Use gexp.
2023-01-06gnu: ngless: Remove trailing #T from build phases.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (ngless)[arguments]: Remove trailing #T.
2023-01-06gnu: Add guile-newra.Ricardo Wurmus
* gnu/packages/guile-xyz.scm (guile-newra): New variable.
2023-01-06gnu: Add psascan.Ricardo Wurmus
* gnu/packages/cpp.scm (psascan): New variable.
2023-01-06maint: Add missing modules to the kernel manifest.Leo Famulari
* etc/kernels-manifest.scm: Add missing modules.
2023-01-05gnu: ruby-asciidoctor: Install man page.Maxim Cournoyer
* gnu/packages/ruby.scm (ruby-asciidoctor) [phases] {install-man-page}: New phase.
2023-01-05gnu: ruby-asciidoctor: Update to 2.0.18.Maxim Cournoyer
* gnu/packages/ruby.scm (ruby-asciidoctor): Update to 2.0.18. [native-inputs]: Sort inputs. Add ruby-open-uri-cached. [phases]: Delete trailing #t. [description]: Remove mention of Docbook 4.5, no longer supported.
2023-01-05gnu: anystyle: Update to 1.3.2.Maxim Cournoyer
* gnu/packages/ruby.scm (anystyle): Update to 1.3.2. [source]: Adjust URL.
2023-01-05gnu: ruby-unicode-scripts: Update to 1.8.0.Maxim Cournoyer
* gnu/packages/ruby.scm (ruby-unicode-scripts): Update to 1.8.0. Adjust indentation.
2023-01-05gnu: ruby-minitest: Update to 5.17.0.Maxim Cournoyer
* gnu/packages/ruby.scm (ruby-minitest): Update to 5.17.0. (ruby-minitest-5.14): New variable. (ruby-minitest-4): Delete trailing #t. (ruby-byebug): Delete trailing #t. [native-inputs]: Replace ruby-minitest with ruby-minitest-5.14.
2023-01-05gnu: ath9k-htc-firmware: Fix deprecation warnings.Maxim Cournoyer
* gnu/packages/firmware.scm (ath9k-htc-firmware): Invoke cross-binutils using keyword arguments.
2023-01-05gnu: zfs: Update to 2.1.7.Brian Cully
* gnu/packages/file-systems.scm (zfs): Update to 2.1.7. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05gnu: flightgear: Update to 2020.3.17.Parnikkapore
* gnu/packages/games (flightgear): Update to 2020.3.17. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05gnu: kicad: Update to 6.0.10.Peter Polidoro
* gnu/packages/engineering.scm (kicad): Update to 6.0.10. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05gnu: Add charls.Tor-björn Claesson
* gnu/packages/image-processing.scm (charls): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05gnu: gpodder: Update to 3.11.0.raingloom
* gnu/packages/gpodder.scm (gpodder): Update to 3.11.0. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2023-01-05doc: Introduce using swap space for hibernation, with examples.Ivan Vilata-i-Balaguer
* doc/guix.texi (Swap Space): Add a concise introduction to hibernation and specifying a swap space to the kernel to make resume work. Mention space requirements and the need of an offset for swap files. Include a trivial example on how to set up a mapped swap volume for hibernation and another one for a swap file, including how to compute the file offset. Signed-off-by: Ludovic Courtès <ludo@gnu.org>