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2022-04-07gnu: cl-sxql: Update to 0.1.0-3.cc3478c.jgart
* gnu/packages/lisp-xyz.scm (sbcl-sxql): Update to 0.1.0-3.cc3478c and use revision variable in let block. [inputs]: Add missing sbcl-trivia input. Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
2022-04-07secret-service: Allow cooperative scheduling when Fibers is used.Ludovic Courtès
This lets the 'childhurd' service start in the background, letting shepherd perform other tasks in the meantime, including serving clients (such as the 'herd' command). * gnu/build/secret-service.scm (with-modules): New macro. (wait-for-readable-fd): Add cooperative implementation when Fibers is in use. (secret-service-send-secrets): Define 'sleep' so that it cooperates when Fibers is in use.
2022-04-07secret-service: Abstract 'wait-for-readable-fd'.Ludovic Courtès
* gnu/build/secret-service.scm (wait-for-readable-fd): New procedure. (secret-service-send-secrets): Use it instead of 'select'.
2022-04-07services: openssh: Start as an inetd service.Ludovic Courtès
* gnu/services/ssh.scm (openssh-shepherd-service): Use 'make-inetd-constructor' when it is defined. (<openssh-configuration>)[max-connections]: New field. * gnu/tests/ssh.scm (run-ssh-test)["sshd PID"]: Adjust to cope with PID-FILE being #f. * gnu/tests/ssh.scm (%test-openssh): Pass #f as the 'pid-file' argument. * doc/guix.texi (Networking Services): Document 'max-connections'.
2022-04-07home: shepherd: Default to version 0.9.Ludovic Courtès
* gnu/home/services/shepherd.scm (<home-shepherd-configuration>)[shepherd]: Default to SHEPHERD-0.9. (home-shepherd-configuration-file): Use 'start-in-the-background' when it is defined.
2022-04-07services: shepherd: Default to version 0.9.Ludovic Courtès
* gnu/services/shepherd.scm (scm->go): Define 'shepherd&co' and pass it to 'with-extensions'. (shepherd-configuration-file): Call 'start-in-the-background' when it is defined. (<shepherd-configuration>)[shepherd]: Default to SHEPHERD-0.9. * gnu/system.scm (hurd-default-essential-services): Use SHEPHERD-0.8.
2022-04-07shepherd: Adjust 'fork+exec-command/container' for the Shepherd 0.9.Ludovic Courtès
* gnu/build/shepherd.scm (exec-command*): New procedure, with code formerly... (make-forkexec-constructor/container): ... here. Use it. (fork+exec-command/container): Use 'fork+exec-command' only when CONTAINER-SUPPORT? is false or PID is the current process.
2022-04-07gnu: shepherd: Add 0.9.0.Ludovic Courtès
* gnu/packages/admin.scm (shepherd): Rename to... (shepherd-0.8): ... this. New variable. (shepherd): Define as an alias for SHEPHERD-0.8. (shepherd-0.9): New variable. (guile2.2-shepherd): Inherit from SHEPHERD-0.9 and adjust inputs accordingly.
2022-04-06gnu: lagrange: Update to 1.12.1.Efraim Flashner
* gnu/packages/web-browsers.scm (lagrange): Update to 1.12.1.
2022-04-06gnu: keepassxc: Update to 2.7.1.Efraim Flashner
* gnu/packages/password-utils.scm (keepassxc): Update to 2.7.1.
2022-04-06gnu: vim: Update to 8.2.4701.Efraim Flashner
* gnu/packages/vim.scm (vim): Update to 8.2.4701. [arguments]: Adjust custom 'skip-or-fix-failing-tests phase to skip another test.
2022-04-06installer: user: Remove useless filtering.Mathieu Othacehe
* gnu/installer/user.scm (users->configuration): Remove root account filtering that is now performed in the "run-user-add-page" procedure.
2022-04-06installer: user: Forbid root user creation.Mathieu Othacehe
Forbid root user creation as it could lead to a system without any non-priviledged user accouts. Fixes: <https://issues.guix.gnu.org/54666>. * gnu/installer/newt/user.scm (run-user-add-page): Forbid it.
2022-04-06gnu: python-pybtex: Update to 0.24.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pybtex): Update to 0.24.0. [native-inputs]: Remove python-nose; add python-pytest. [inputs]: Move python-latexcodec, python-pyyaml, and python-six from here... [propagated-inputs]: ...to here. [arguments]: Use pytest.
2022-04-06gnu: python-latexcodec: Update to 2.0.1.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-latexcodec): Update to 2.0.1. [inputs]: Move python-six from here... [propagated-inputs]: ...to here.
2022-04-06gnu: Add r-rnaseqdtu.Hong Li
* gnu/packages/bioinformatics.scm (r-rnaseqdtu): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-06gnu: Add r-stager.Hong Li
* gnu/packages/bioconductor.scm (r-stager): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-06gnu: Add r-rafalib.Hong Li
* gnu/packages/cran.scm (r-rafalib): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-05gnu: icecat: Update to 91.8.0-guix0-preview1 [security fixes].Mark H Weaver
Includes fixes for CVE-2022-1097, CVE-2022-1196, CVE-2022-24713, CVE-2022-28281, CVE-2022-28282, CVE-2022-28285, CVE-2022-28286, and CVE-2022-28289. * gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update. (icecat-source): Update gnuzilla commit, base version, and hashes.
2022-04-05gnu: poco: Make description a full sentence.Liliana Marie Prikler
* gnu/packages/cpp.scm (poco)[description]: Expand into a full sentence.
2022-04-05gnu: u-boot-rockpro64-rk3399: Add support for booting from SCSI/SATA.Ricardo Wurmus
* gnu/packages/bootloaders.scm (u-boot-rockpro64-rk3399)[arguments]: Add 'patch-config phase to support SCSI/SATA disks. Signed-off-by: Vagrant Cascadian <vagrant@debian.org>
2022-04-05gnu: u-boot: Update to 2022.04.Vagrant Cascadian
* gnu/packages/bootloaders.scm (u-boot): Update to 2022.01. [native-inputs]: Add gnutls, tinfo, libuuid. (u-boot-qemu-riscv64-smode): Drop custom patches. * gnu/packages/patches/u-boot-allow-disabling-openssl.patch: Refresh patch. * gnu/packages/patches/u-boot-riscv64-fix-extlinux.patch: Remove patch, applied upstream. * gnu/local.mk (dist_patch_DATA): Update with removed patches. Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2022-04-05gnu: Add ncurses-with-tinfo.Vagrant Cascadian
* gnu/packages/ncurses.scm (ncurses/tinfo): New variable.
2022-04-05gnu: l2md: Update to 9db252bc.Andrew Tropin
[[PGP Signed Part:No public key for 2208D20958C1DEB0 created at 2022-03-28T11:03:48+0200 using RSA]] * gnu/packages/mail.scm (l2md): Update to 9db252bc. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05services: messaging: Fix two copy-paste mistakes; avoid warnings.Attila Lendvai
* gnu/services/messaging.scm (file-name-list, file-object-list): Fix name in 'define-maybe' instances. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: plocate: Build with "--sharedstatedir=/var".ykonai
Current plocate package sets the --sharedstatedir to a store directory, which causes updatedb and plocate to fail by default since the store is immutable. This will set the default database path to /var/cache/plocate.db instead. * gnu/packages/search.scm (plocate): Change build options. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: phodav: Use libsoup 2 instead of libsoup 3.Leo Nikkilä
Looks like phodav requires libsoup 2. Example of failing build logs, wanting libsoup 2.4: <https://ci.guix.gnu.org/build/584454/log/raw> After swapping the dependency, tests were failing due to HOME not being writable. I added a new build phase to account for this. I also removed the start-virtual-dir-server phase which no longer seems required, the tests pass without it. * gnu/packages/gnome.scm (phodav): Fix build, tests. [inputs]: Replace libsoup 3 with libsoup 2. [arguments]<#:phases>[set-temporary-home]: New phase. [arguments]<#:phases>[start-virtual-dir-server]: Remove phase. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: pantheon-calculator: Update to 1.7.2.jgart
* gnu/packages/pantheon.scm (pantheon-calculator): Update to 1.7.2. [arguments]: Remove trailing boolean. [inputs]: Use guix style and add libhandy input. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: python-w3lib: Fix build.Felix Gruber
* gnu/packages/python-web.scm (python-w3lib): Fix build. [source]: Add python-w3lib-fix-test-failure.patch. [arguments]: Use pytest in the 'check phase. [native-inputs]: Add python-pytest. * gnu/packages/patches/python-w3lib-fix-test-failure.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: python-gst: Fix the concatenation of install path.Zhu Zihao
Fixes a regression introduced in a5c2e7961c21ef8620ce4cfb3569109fbd694e1e. * gnu/packages/gstreamer.scm (python-gst): [arguments]: <configure-flags>: Add missing leading slash. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: python-dotenv: Update to 0.20.0.jgart
* gnu/packages/python-xyz.scm (python-dotenv): Update to 0.20.0. [home-page]: Update home page. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: linux: Allow kconfig options to be stringsantlers
* gnu/packages/linux.scm (config->string): add a clause handling strings Allows for the declarative configuration of kconfig options which accept strings, such as CONFIG_MODULE_SIG_KEY. I've enclosed the given string in quotes, but don't do any kind of escaping. See the kernel mailing list for the current state of escaped strings upstream: https://patchwork.kernel.org/project/linux-kbuild/patch/1431003982-992-1-git-send-email-sr@denx.de/ Apologies to those with double-quotes or backslashes in their CONFIG_SYSTEM_*_KEYS. Signed-off-by: antlers <autumnalantlers@gmail.com> Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: celluloid: Update to 0.23.Michael Rohleder
* gnu/packages/video.scm (celluloid): Update to 0.23. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05doc: Update the sample yggdrasil-private.conf.Aleksandr Vityazev
* doc/guix.texi (Networking Services): Update the sample yggdrasil-private.conf. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: curlie: Update to 1.6.9Imran Iqbal
* gnu/packages/curl.scm (curlie): Update to 1.6.9 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05gnu: xmonad-next: Change #:phases to gexp.Daniel Meißner
* gnu/packages/wm.scm (xmonad-next)[arguments]: Use #$output, #$name and #$synopsis instead of %output, name and synopsis. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2022-04-05Merge branch 'wip-pyyaml'Ricardo Wurmus
2022-04-05gnu: pigx-scrnaseq: Set NUMBA_CACHE_DIR.Ricardo Wurmus
This is needed since the update of python-loompy. * gnu/packages/bioinformatics.scm (pigx-scrnaseq)[arguments]: Rename 'set-PYTHONPATH to 'set-additional-environment-variables and set NUMBA_CACHE_DIR.
2022-04-05gnu: pigx-scrnaseq: Use new inputs style.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-scrnaseq)[inputs]: Use plain list.
2022-04-05gnu: pigx-scrnaseq: Update to 1.1.8.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (pigx-scrnaseq): Update to 1.1.8. [patches]: Remove. [native-inputs]: Remove. * gnu/packages/patches/pigx-scrnaseq-no-citeproc.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it.
2022-04-05news: Add 'de' translation.Florian Pelz
* etc/news.scm: Add German translation of 'guix shell --export-manifest' entry.
2022-04-05gnu: r-with-tests: Update to 4.1.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-with-tests): Update to 4.1.3.
2022-04-05gnu: git: Update to 2.35.1.Greg Hogan
* gnu/packages/version-control.scm (git): Update to 2.35.1. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2022-04-05Revert "gnu: git: Update to 2.35.1."Maxim Cournoyer
This reverts commit 223a3d7f7fdb6af9c4c090785cab15d38680e887, as it triggered thousands of rebuilds due to inadvertently touching git-minimal/fixed. Reported-by: Christopher Baines <mail@cbaines.net>
2022-04-05gnu: python-pyyaml: Update to 6.0.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python-pyyaml): Update to 6.0.
2022-04-05gnu: python2-pyyaml: Detach source from python-pyyaml.Ricardo Wurmus
* gnu/packages/python-xyz.scm (python2-pyyaml): Override source and version fields. (python-pyyaml)[properties]: Add python2-variant.
2022-04-04gnu: eyeD3: Update to 0.9.6.Leo Famulari
* gnu/packages/mp3.scm (eyed3): Update to 0.9.6. [propagated-inputs]: Add python-deprecation and python-filetype.
2022-04-04news: Add entry about 'guix shell --export-manifest'.Ludovic Courtès
* etc/news.scm: Add entry.
2022-04-04shell: Add '--export-manifest'.Ludovic Courtès
* guix/scripts/shell.scm (show-help, %options): Add '--export-manifest'. (manifest-entry-version-prefix, manifest->code*) (export-manifest): New procedures. (guix-shell): Honor '--export-manifest'. * tests/guix-shell-export-manifest.sh: New file. * Makefile.am (SH_TESTS): Add it. * doc/guix.texi (Invoking guix shell): Document '--export-manifest'. (Invoking guix environment): Link to it. (Invoking guix pack): Likewise.
2022-04-04environment: Export 'load-manifest'.Ludovic Courtès
* guix/scripts/environment.scm (load-manifest): New procedure. (options/resolve-packages): Use it.
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