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2022-08-08gnu: Remove texlive's dependence on ruby-rspec and ruby-byebug....Motivation: Break the dependency chain from guix to mariadb. Prior to this patch: $ guix graph --path guix mariadb guix@1.3.0-27.598f728 po4a@0.63 texlive-tiny@59745 texlive-latex-base@59745 texlive-hyphen-afrikaans@59745 ruby-hydra@0.0-0.5abfa37 ruby-byebug@11.1.3 ruby-rubocop@1.10.0 ruby-parallel@1.21.0 ruby-mysql2@0.5.2 mariadb@10.5.12 As of this patch: $ ./pre-inst-env guix graph --path guix mariadb guix graph: error: no path from 'guix@1.3.0-27.598f728' to 'mariadb@10.5.12' * gnu/local.mk (dist_patch_DATA): Add texlive-hyph-utf8-no-byebug.patch. * gnu/packages/patches/texlive-hyph-utf8-no-byebug.patch: New file. * gnu/packages/tex.scm (hyph-utf8-scripts): Add patch. (texlive-hyphen-package): Depend on ruby-hydra-minimal. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Tom Fitzhenry
2022-08-08gnu: Add ruby-hydra-minimal....* gnu/local.mk (dist_patch_DATA): Add ruby-hydra-minimal-no-byebug.patch. * gnu/packages/patches/ruby-hydra-minimal-no-byebug.patch: New file. * gnu/packages/ruby.scm (ruby-hydra): Refactor to inherit from ruby-hydra-minimal. (ruby-hydra-minimal): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Tom Fitzhenry
2022-07-28gnu: gst-plugins-good: Update to 1.20.3....* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.20.3. [source]<patches>: Remove “gst-plugins-good-fix-test.patch”. [arguments]<#:phases>: Add ‘absolutize-libsoup-library’ and ‘skip-failing-tests’. * gnu/packages/patches/gst-plugins-good-fix-test.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Liliana Marie Prikler
2022-07-27Merge branch 'master' into stagingMarius Bakke
2022-07-23gnu: PHP: Fix test failure with newer cURL....* gnu/packages/patches/php-curl-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. * gnu/packages/php.scm (php)[source](patches): Add it. Marius Bakke
2022-07-23gnu: PHP: Update to 7.4.30....* gnu/packages/php.scm (php): Update to 7.4.30. [source](patches): Remove obsolete patch. * gnu/packages/patches/php-openssl_x509_checkpurpose_basic.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2022-07-21Merge branch 'master' into stagingMarius Bakke
2022-07-18gnu: libgeotiff: Update to 1.7.1....* gnu/packages/geo.scm (libgeotiff): Update to 1.7.1. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Felix Gruber
2022-07-23gnu: eigen: Update to 3.4.0....* gnu/packages/algebra.scm (eigen): Update to 3.4.0. * gnu/packages/patches/eigen-fix-strict-aliasing-bug.patch: New file. * gnu/packages/patches/eigen-remove-openmp-error-counting.patch, gnu/packages/patches/eigen-stabilise-sparseqr-test.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Update accordingly. Signed-off-by: Ludovic Courtès <ludo@gnu.org> vicvbcun
2022-07-13services: docker: Fix race condition....Fixes <https://issues.guix.gnu.org/38432>. * gnu/packages/patches/containerd-create-pid-file.patch: New file. * gnu/local.mk (dist_patch_DATA): Add this. * gnu/packages/docker.scm (containerd)[source]: Add this patch. * gnu/services/docker.scm (containerd-shepherd-service): Add #:pid-file and #:pid-file-timeout. * gnu/services/docker.scm (docker-shepherd-service): Add --containerd flag. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Oleg Pykhalov
2022-07-13Merge branch 'master' into stagingMarius Bakke
2022-07-13gnu: emacs-hyperbole: Update to 8.0.0....* gnu/packages/emacs-xyz.scm (emacs-hyperbole): Update to 8.0.0. [arguments]<#:include>: Use %default-include. <#:phases>: Add build fix. * gnu/packages/patches/emacs-hyperbole-toggle-messaging.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Delete reference to removed file. Nicolas Goaziou
2022-07-12gnu: pokerth: Fix build and modernize package....Fixes <https://issues.guix.gnu.org/51093>. * gnu/packages/games.scm (pokerth) [source]: Apply patch [inputs]: Use new style. [phases]: Delete trailing #t. Use gexps. {fix-paths}: Remove the gsasl and libircclient related substitutions. Maxim Cournoyer
2022-07-12gnu: home: Add Guix channels service....* gnu/home/services/guix.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add guix.scm. * doc/guix.texi: Add documentation for home-channels-service. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Reily Siegel
2022-07-12gnu: llvm-3.7, llvm-3.8: Fix build with gcc....* gnu/packages/patches/clang-runtime-3.7-fix-build-with-python3.patch, gnu/packages/patches/llvm-3.x.1-fix-build-with-gcc.patch: New files. * gnu/packages/llvm.scm (clang-runtime-3.7, llvm-3.7, llvm-3.8): Use patches. * gnu/local.mk: Register patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-07-12gnu: llvm-8: Fix build with gcc-10....* gnu/packages/patches/llvm-8-fix-build-with-gcc-10.patch: New file. * gnu/packages/llvm.scm (clang-8, clang-runtime-8): Update to 8.0.1. * gnu/packages/llvm.scm (llvm-8): Use patch and update to 8.0.1. * gnu/local.mk: Register patch. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Greg Hogan
2022-07-11gnu: xf86-video-mach64: Update to 6.9.7....* gnu/packages/xorg.scm (xf86-video-mach64): Update to 6.9.7. [source]: Remove patches. * gnu/packages/patches/xf86-video-mach64-bool-to-boolean.patch, gnu/packages/patches/xf86-video-mach64-glibc-2.20.patch: Remove files. * gnu/local.mk (dist_patch_DATA): Remove them. Efraim Flashner
2022-07-10gnu: rust-bootstrap: Add support for riscv64-linux....* gnu/packages/rust.scm (%mrustc-source): Add patch. (rust-bootstrap)[native-inputs]: On riscv64-linux add gcc@9:lib. [supported-systems]: Add riscv64-linux. Adjust comment. * gnu/packages/patches/mrustc-riscv64-support.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2022-07-07gnu: mia: Build against VTK 9....* gnu/packages/image-processing.scm (mia): Build against VTK 9. [inputs]: Remove vtk-7; add vtk. [source]: Add mia-vtk9.patch. * gnu/packages/patches/mia-vtk9.patch: New file. * gnu/local.mk: Add it. Signed-off-by: Christopher Baines <mail@cbaines.net> Felix Gruber
2022-07-07gnu: pitivi: Update to 2022.06.0....* gnu/packages/patches/pitivi-fix-build-with-meson-0.60.patch: Delete file. * gnu/local.mk (dist_patch_DATA): De-register it. * gnu/packages/video.scm (pitivi): Update to 2022.06.0. [version]: Do not prefix with previous semver version. [inputs]{gst-plugins/selection}: Add comment about cvtracker. {python-librosa}: New input. Maxim Cournoyer
2022-07-05gnu: rust: Bootstrap with rust-1.54.0....* gnu/packages/rust.scm (rust-1.39): Rename to rust-bootstrap. Update to 1.54.0. [source]: Update snippet to new version. Replace mrustc patch for 1.39.0 with patch for 1.54.0. [inputs]: Remove libssh2. Replace llvm-9 with llvm. Add gcc-9. [arguments]: Adjust custom 'setup-mrustc-sources to also create file with rust version. Adjust custom 'patch-makefiles phase to changes in mrustc's build steps. Adjust custom 'build phase to follow mrustc's build steps for rust-1.54. (rust-1.40): Replace post-bootstrapped rust-1.40 with 1.55. [arguments]: Add custom 'set-linker-locale-to-utf8 phase. Adjust custom 'build phase. Remove custom 'neuter-tidy phase. [inputs]: Replace llvm-9 with llvm. (rust-1.41, rust-1.42, rust-1.43, rust-1.44, rust-1.45, rust-1.46, rust-1.47, rust-1.48, rust-1.49, rust-1.50, rust-1.51, rust-1.52, rust-1.53): Remove variables. * gnu/packages/patches/rust-1.39.0-src.patch: Remove file. * gnu/packages/patches/rust-1.54.0-src.patch: Add file. * gnu/local.mk (dist_patch_DATA): Register changes. Efraim Flashner
2022-07-04gnu: tbb: Fix building on riscv64-linux....* gnu/packages/tbb.scm (tbb)[source]: Add patch. * gnu/packages/patches/tbb-other-arches.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2022-07-03gnu: curl: Fix build on some systems....* gnu/packages/curl.scm (curl-7.84.0)[source]: Add patch to work around implicit function declaration. * gnu/packages/patches/curl-easy-lock.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2022-07-01gnu: mcrl2: Update to 202206.0....* gnu/packages/patches/mcrl2-fix-1687.patch, gnu/packages/patches/mcrl2-fix-counterexample.patch: New files. * gnu/local.mk (dist_patch_DATA): Add them. * gnu/packages/maths.scm (mcrl2): Update to 202206.0 and use them. Jan (janneke) Nieuwenhuizen
2022-06-24gnu: Remove unused patch....This is a follow-up to commit fce910af555b72d02ba868885571b2fdc38b2d5f. * gnu/packages/patches/postgresql-riscv-spinlocks.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2022-06-23gnu: freeglut: Update to 3.2.2....* gnu/packages/gl.scm (freeglut): Update to 3.2.2. [source](uri): Switch to new primary download location. [source](patches): Remove. * gnu/packages/patches/freeglut-gcc-compat.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2022-06-22gnu: Add phoronix-test-suite....* gnu/packages/patches/phoronix-test-suite-fsdg.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. * gnu/packages/benchmark.scm (phoronix-test-suite): New variable. (gcc-toolchain*): Likewise. Maxim Cournoyer
2022-06-21gnu: cmh: Add patch to work with current fplll....* gnu/packages/patches/cmh-support-fplll.patch: New file. * gnu/packages/algebra.scm (cmh)[source]: Add patch. * gnu/local.mk (dist_patch_DATA): Register patch. Andreas Enge
2022-06-19gnu: Add cctools....* gnu/packages/darwin.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * gnu/packages/darwin.scm (cctools): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Philip McGrath
2022-06-23gnu: docker: Update to 20.10.17....* gnu/packages/docker.scm (%docker-version): Update to 20.10.17. (docker-libnetwork)[source]: Update commit according to vendor.conf. Reset revision to 1. Simplify snippet. (docker)[origin]: Remove docker-fix-tests.patch. [arguments]: Adapt 'patch-paths phase, substitute "ip6tables" and buildkit-qemu. Remove trailing #t. [native-inputs]: Replace go-1.14 by go. (docker-cli)[source]: Update hash. [arguments]: Set GO_LINKMODE to "dynamic". Remove trailing #t. [phases]{check}: Replace 'if' with 'when'. * gnu/packages/networking.scm (go-sctp): Update commit according to docker-libnetwork's vendor.conf. * gnu/packages/patches/docker-fix-tests.patch: Delete. * gnu/local.mk (dist_patch_DATA): Remove patch. Co-authored-by: Maxim Cournoyer <maxim.cournoyer@gmail.com> Pierre Langlois
2022-06-17home: Add OpenSSH service....* gnu/home/services/ssh.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it. * po/guix/POTFILES.in: Add it. * doc/guix.texi (Secure Shell): New section. Ludovic Courtès
2022-06-17gnu: public-inbox: Fixes to allow the testsuite to run...This patch makes the public-inbox testsuite pass. Some tests are skipped, so the test coverage could likely be increased with more massaging. Perhaps the most significant change is using tini to run the testsuite so that the testsuite's sub-processes are reaped. The ‘check’ phase is based on the one from the mutter package. Thanks to Maxim Cournoyer for pointing out this solution. * gnu/packages/patches/public-inbox-fix-spawn-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Add new patch. * gnu/packages/mail.scm (public-inbox)[source]: Add new patch. [arguments]<#:tests?>: Remove argument. <#:imported-modules>: Add argument. <#:modules>: Likewise. <#:phases>{qualify-paths}: Substitute path for ‘/bin/cp’. {pre-check}: Don't skip httpd-unix.t test. Remove unnecessary path substitutions for “env” and “/bin/sh”. {check}: Replace with custom version that launches the tests under tini. [native-inputs]: Add tini. Signed-off-by: Ludovic Courtès <ludo@gnu.org> Thiago Jung Bauermann
2022-06-16gnu: rocm: Update to 5.1.3....All packages updated at the same time as they have a shared version. rocclr is no longer a stand-alone package, so the previous version is kept as rocclr-4 and the current version is just the source, rocclr-src, needed by rocm-opencl-runtime. * gnu/packages/patches/rocm-opencl-runtime-3.10.0-includes.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-nocltrace.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them. * gnu/packages/patches/rocm-comgr-3.1.0-dependencies.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noclinfo.patch, gnu/packages/patches/rocm-opencl-runtime-4.3-noopencl.patch: Update patches. * gnu/packages/rocm.scm (rocm-cmake, rocm-device-libs, rocm-comgr, roct-thunk-interface, rocr-runtime, rocm-opencl-runtime, rocminfo, rocm-bandwidth-test): Update to 5.1.3. (roct-thunk-interface)[inputs]: Add libdrm. [native-inputs]: Add gcc:lib and pkg-config. (rocclr-src): New variable. (rocclr-4): New variable (previous version of the package). (rocm-opencl-runtime)[source]: Remove obsolete patches. [arguments]: Rewrite with gexps. Add needed #:configure-flags. [inputs]: Remove rocclr, add numactl. Signed-off-by: Ludovic Courtès <ludo@gnu.org> John Kehayias
2022-06-16gnu: Update llvm-for-rocm: Update to 5.1.3....* gnu/packages/llvm.scm (llvm-for-rocm): Update to 5.1.3, now based on llvm-14. [source]{patches}: Remove unneeded patches (add_Object and add_libraries) and add new one (linkdl). * gnu/packages/patches/llvm-roc-3.0.0-add_libraries.patch, gnu/packages/patches/llvm-roc-4.2.0-add_Object.patch: Delete files. * gnu/packages/patches/llvm-roc-5.0.0-linkdl.patch: New file. * gnu/local.mk (dist_patch_DATA): Update to match current patches. Signed-off-by: Ludovic Courtès <ludo@gnu.org> John Kehayias
2022-06-16gnu: Add python-zeep....* gnu/packages/python-web.scm (python-zeep): New variable. * gnu/packages/patches/python-zeep-Fix-pytest_httpx-test-cases.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Co-authored-by: Hartmut Goebel <h.goebel@crazy-compilers.com> Vinicius Monego
2022-06-15gnu: Add kismet....* gnu/packages/networking.scm (kismet): New variable. * gnu/local.mk: Add patch. * gnu/packages/patches/kismet-unbundle-boost.patch: New file. Co-authored-by: Ludovic Courtès <ludo@gnu.org> Petr Hodina
2022-06-14gnu: TimescaleDB: Update to 2.7.0....* gnu/packages/databases.scm (timescaledb): Update to 2.7.0. [source](snippet): Remove more files. [source](patches): New field. * gnu/packages/patches/timescaledb-flaky-test.patch: New file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Marius Bakke
2022-06-13gnu: java-commons-lang3: Update to 3.12.0...* gnu/packages/java.scm (java-commons-lang3): Update to 3.12.0. * gnu/packages/patches/java-commons-lang-fix-dependency.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Signed-off-by: Julien Lepiller <julien@lepiller.eu> Artyom V. Poptsov
2022-06-13gnu: fplll: Update to 5.4.2....* gnu/packages/algebra.scm (fplll): Update to 5.4.2. [source]: Remove patch; for unknown reasons the package now compiles without it. * gnu/packages/patches/fplll-std-fenv.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Unregister patch. Andreas Enge
2022-06-13gnu: Add js-mathjax-for-r-mathjaxr....* gnu/packages/patches/mathjax-3.1.2-no-a11y.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/javascript.scm (js-mathjax-for-r-mathjaxr): New variable. Ricardo Wurmus
2022-06-12Merge branch 'master' into stagingLudovic Courtès
2022-06-08Merge branch 'master' into stagingLudovic Courtès
2022-06-07gnu: Remove unused patch....* gnu/packages/patches/python-flake8-polyfill-flake8-4-compat.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Efraim Flashner
2022-06-07gnu: python-flake8-polyfill: Fix building with python-flake8@4....* gnu/packages/python-xyz.scm (python-flake8-polyfill)[source]: Add patch. * gnu/packages/patches/python-flake8-polyfill-flake8-4-compat.patch: New file. * gnu/local.mk (dist_patch_DATA): Register it. Efraim Flashner
2022-06-10services: jami: Modernize to adjust to Shepherd 0.9+ changes....This partially fixes <https://issues.guix.gnu.org/54786>, allowing the 'jami' and 'jami-provisioning' system tests to pass again. In version 0.9.0, Shepherd constructors are now run concurrently, via cooperative scheduling (Guile Fibers). The Jami service previously relied on blocking sleeps while polling for D-Bus services to become ready after forking a process; this wouldn't work anymore since while blocking the service process wouldn't be given the chance to finish starting. The new reliance on Fibers in Shepherd's fork+exec-command in the helper 'send-dbus' procedure also meant that it wouldn't work outside of Shepherd anymore. Finally, the 'start-service' Shepherd procedure used in the test suite would cause the Jami daemon to be spawned multiple times (a bug introduced in Shepherd 0.9.0). To fix/simplify these problems, this change does the following: 1. Use the Guile AC/D-Bus library for D-Bus communication, which simplify things, such as avoiding the need to fork 'dbus-send' processes. 2. The non-blocking 'sleep' version of Fiber is used for the 'with-retries' waiting syntax. 3. A 'dbus' package variant is used to adjust the session bus configuration, tailoring it for the use case at hand. 4. Avoid start-service in the tests, preferring 'jami-service-available?' for now. * gnu/build/jami-service.scm (parse-dbus-reply, strip-quotes) (deserialize-item, serialize-boolean, dbus-dict->alist) (dbus-array->list, parse-account-ids, parse-account-details) (parse-contacts): Delete procedures. (%send-dbus-binary, %send-dbus-bus, %send-dbus-user, %send-dbus-group) (%send-dbus-debug): Delete parameters. (jami-service-running?): New procedure. (send-dbus/configuration-manager): Rename to... (call-configuration-manager-method): ... this. Turn METHOD into a positional argument. Turn ARGUMENTS into an optional argument. Invoke `call-dbus-method' instead of `send-dbus', adjusting callers accordingly. (get-account-ids, id->account-details, id->account-details) (id->volatile-account-details, username->id, add-account remove-account) (username->contacts, remove-contact, add-contact, set-account-details) (set-all-moderators, username->all-moderators?, username->moderators) (set-moderator): Adjust accordingly. (with-retries, send-dbus, dbus-available-services) (dbus-service-available?): Move to ... * gnu/build/dbus-service.scm: ... this new module. (send-dbus): Rewrite to use the Guile AC/D-Bus library. (%dbus-query-timeout, sleep*): New variables. (%current-dbus-connection): New parameter. (initialize-dbus-connection!, argument->signature-type) (call-dbus-method): New procedures. (dbus-available-services): Adjust accordingly. * gnu/local.mk (GNU_SYSTEM_MODULES): Register new module. * gnu/packages/glib.scm (dbus-for-jami): New variable. * gnu/services/telephony.scm: (jami-configuration)[dbus]: Default to dbus-for-jami. (jami-dbus-session-activation): Write a D-Bus daemon configuration file at '/var/run/jami/session-local.conf'. (jami-shepherd-services): Add the closure of guile-ac-d-bus and guile-fibers as extensions. Adjust imported modules. Remove no longer used parameters. <jami-dbus-session>: Use a PID file, avoiding the need for the manual synchronization. <jami>: Set DBUS_SESSION_BUS_ADDRESS environment variable. Poll using 'jami-service-available?' instead of 'dbus-service-available?'. * gnu/tests/telephony.scm (run-jami-test): Add needed Guile extensions. Set DBUS_SESSION_BUS_ADDRESS environment variable. Adjust all tests to use 'jami-service-available?' to determine if the service is started rather than the now problematic Shepherd's 'start-service'. Maxim Cournoyer
2022-06-05gnu: ncftp: Build reproducibly....* gnu/packages/patches/ncftp-reproducible.patch: New file. * gnu/local.mk (dist_patch_DATA): Add patch. * gnu/packages/ftp.scm (ncftp): Add patch. Vagrant Cascadian
2022-06-05gnu: alpine: Update to 2.26....* gnu/packages/mail.scm (alpine): Update to 2.26. [source]: Remove patch. * gnu/packages/patches/alpine-fix-privacy-policy-crash.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2022-06-08gnu: epiphany: Update to 42.2....* gnu/packages/gnome.scm (epiphany): Update to 42.2. [source]: Remove patches. * gnu/packages/patches/epiphany-update-libportal-usage.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Adjust accordingly. Liliana Marie Prikler
2022-06-05gnu: sudo: Update to 1.9.11p1....* gnu/packages/admin.scm (sudo): Update to 1.9.11p1. [source]: Remove patch again. * gnu/packages/patches/sudo-missing-sudo_pt_regs-aarch64.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
2022-06-05gnu: nftables: Update to 1.0.4....* gnu/packages/linux.scm (nftables): Update to 1.0.4. [source]: Remove patch. * gnu/packages/patches/nftables-fix-makefile.patch: Delete file. * gnu/local.mk (dist_patch_DATA): Remove it. Tobias Geerinckx-Rice
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