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path: root/gnu/packages/bioconductor.scm
AgeCommit message (Expand)Author
2020-04-16gnu: r-destiny: Add missing input....* gnu/packages/bioconductor.scm (r-destiny)[native-inputs]: Add r-nbconvertr. Ricardo Wurmus
2020-04-16gnu: r-bacon: Add missing input....* gnu/packages/bioconductor.scm (r-bacon)[native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-16gnu: r-bioassayr: Add missing input....* gnu/packages/bioconductor.scm (r-bioassayr)[native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-16gnu: r-activepathways: Add missing input....* gnu/packages/bioconductor.scm (r-activepathways)[native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-16gnu: r-dose: Add missing input....* gnu/packages/bioconductor.scm (r-dose)[native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-14gnu: r-atacseqqc: Update to 1.10.4....* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.4. Ricardo Wurmus
2020-04-14gnu: r-a4base: Update to 1.34.1....* gnu/packages/bioconductor.scm (r-a4base): Update to 1.34.1. Ricardo Wurmus
2020-04-14gnu: r-varianttools: Update to 1.28.1....* gnu/packages/bioconductor.scm (r-varianttools): Update to 1.28.1. Ricardo Wurmus
2020-04-14gnu: r-genomicinteractions: Update to 1.20.3....* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.20.3. Ricardo Wurmus
2020-04-12gnu: r-wavcluster: Fix grammar of "allows to integrate" to "integrates"....* gnu/packages/bioconductor (r-wavcluster): Fix grammar. Vagrant Cascadian
2020-04-12gnu: r-aucell: Fix grammar of "allows to identify" to "identifies"....* gnu/packages/bioconductor (r-aucell): Fix grammar. Vagrant Cascadian
2020-04-12gnu: r-fgsea: Various grammar and spelling fixes....* gnu/packages/bioconductor (r-fgsea): Fix spelling of "standard". Fix grammar of "allows to make" to "makes". Vagrant Cascadian
2020-04-01gnu: r-biocworkflowtools: Update to 1.12.1....* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.12.1. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-01gnu: r-mixomics: Update to 6.10.9....* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.10.9. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-01gnu: r-cytoml: Update to 1.12.1....* gnu/packages/bioconductor.scm (r-cytoml): Update to 1.12.1. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-01gnu: r-gofuncr: Update to 1.6.1....* gnu/packages/bioconductor.scm (r-gofuncr): Update to 1.6.1. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-04-01gnu: r-genomicinteractions: Update to 1.20.2....* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.20.2. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-27gnu: r-multiassayexperiment: Update to 1.12.6....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.6. Ricardo Wurmus
2020-03-25gnu: r-mast: Add r-knitr to native inputs....* gnu/packages/bioconductor.scm (r-mast)[native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-24gnu: r-multiassayexperiment: Update to 1.12.5....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.5. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-24gnu: r-bigpint: Update to 1.2.2....* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.2.2. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-24gnu: r-biosigner: Update to 1.14.4....* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.4. Ricardo Wurmus
2020-03-24gnu: r-gosemsim: Update to 2.12.1....* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.12.1. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-19gnu: r-biocpkgtools: Update to 1.4.6....* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.4.6. [propagated-inputs]: Add r-biocfilecache, r-rappdirs, r-rlang, and r-tidyselect. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-19gnu: r-biosigner: Update to 1.14.2....* gnu/packages/bioconductor.scm (r-biosigner): Update to 1.14.2. [native-inputs]: Remove r-rmarkdown, pandoc, and pandoc-citeproc. Ricardo Wurmus
2020-03-17gnu: r-htqpcr: Update home page....* gnu/packages/bioconductor.scm (r-htqpcr)[home-page]: Use HTTPS link to PDF paper. Tobias Geerinckx-Rice
2020-03-12gnu: r-cicero: Update to 1.4.4....* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.4. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-12gnu: r-ggcyto: Update to 1.14.1....* gnu/packages/bioconductor.scm (r-ggcyto): Update to 1.14.1. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-12gnu: r-mlinterfaces: Update to 1.66.5....* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.5. Ricardo Wurmus
2020-03-08gnu: r-atacseqqc: Update to 1.10.3....* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.3. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-07gnu: r-multiassayexperiment: Update to 1.12.4....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.4. Ricardo Wurmus
2020-03-07gnu: r-depecher: Update to 1.2.2....* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.2. [native-inputs]: Add r-knitr. Ricardo Wurmus
2020-03-07gnu: r-xcms: Update to 3.8.2....* gnu/packages/bioconductor.scm (r-xcms): Update to 3.8.2. Ricardo Wurmus
2020-03-07gnu: r-yamss: Update to 1.12.1....* gnu/packages/bioconductor.scm (r-yamss): Update to 1.12.1. Ricardo Wurmus
2020-03-02gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Update to 3.10.0....* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): Update to 3.10.0. Tobias Geerinckx-Rice
2020-03-01gnu: r-multiassayexperiment: Update to 1.12.3....* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.12.3. Ricardo Wurmus
2020-03-01gnu: r-cicero: Update to 1.4.2....* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.2. Ricardo Wurmus
2020-03-01gnu: r-mlinterfaces: Update to 1.66.4....* gnu/packages/bioconductor.scm (r-mlinterfaces): Update to 1.66.4. Ricardo Wurmus
2020-03-01gnu: r-biocneighbors: Update to 1.4.2....* gnu/packages/bioconductor.scm (r-biocneighbors): Update to 1.4.2. Ricardo Wurmus
2020-03-01gnu: r-chippeakanno: Update to 3.20.1....* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.20.1. Ricardo Wurmus
2020-03-01gnu: r-gkmsvm: Update to 0.80.0....* gnu/packages/bioconductor.scm (r-gkmsvm): Update to 0.80.0. [propagated-inputs]: Remove r-biocgenerics, r-biostrings, r-genomeinfodb, r-iranges, r-rtracklayer, and r-s4vectors. Ricardo Wurmus
2020-02-25gnu: Add r-bsgenome-hsapiens-ncbi-grch38....* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ncbi-grch38): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net> Mădălin Ionel Patrașcu
2020-02-22gnu: r-genomicinteractions: Update to 1.20.1....* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.20.1. Ricardo Wurmus
2020-02-22gnu: r-cicero: Update to 1.4.1....* gnu/packages/bioconductor.scm (r-cicero): Update to 1.4.1. [propagated-inputs]: Add r-tidyr. Ricardo Wurmus
2020-02-22gnu: r-ggm: Move to (gnu packages bioconductor)....* gnu/packages/cran.scm (r-ggm): Move this variable from here... * gnu/packages/bioconductor.scm (r-ggm): ...to here. Ricardo Wurmus
2020-02-19gnu: r-depecher: Update to 1.2.1....* gnu/packages/bioconductor.scm (r-depecher): Update to 1.2.1. Ricardo Wurmus
2020-02-19gnu: r-mixomics: Update to 6.10.8....* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.10.8. Ricardo Wurmus
2020-02-19gnu: r-rsubread: Update to 2.0.1....* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.0.1. Ricardo Wurmus
2020-02-19gnu: r-atacseqqc: Update to 1.10.2....* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.10.2. Ricardo Wurmus
2020-02-19gnu: r-heatplus: Update to 2.32.1....* gnu/packages/bioconductor.scm (r-heatplus): Update to 2.32.1. Ricardo Wurmus
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